RNA–Protein interactions for RNA: ENST00000638473.1

SCN3A-208, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-208ENST00000638473 ESCO1Q5FWF5 840 aa5.58□□□□□ -1.52
SCN3A-208ENST00000638473 ITPRIPQ8IWB1 547 aa5.58□□□□□ -1.52
SCN3A-208ENST00000638473 CFAP74Q9C0B2 1584 aa5.58□□□□□ -1.52
SCN3A-208ENST00000638473 IPO8O15397 1037 aaKnown RBP5.58□□□□□ -1.52
SCN3A-208ENST00000638473 NBPF8Q3BBV2 869 aa5.58□□□□□ -1.52
SCN3A-208ENST00000638473 PRKRIP1Q9H875 184 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-208ENST00000638473 NCOA1Q15788 1441 aa5.58□□□□□ -1.52
SCN3A-208ENST00000638473 RPGRIP1LQ68CZ1 1315 aa5.58□□□□□ -1.52
SCN3A-208ENST00000638473 ANKLE2Q86XL3 938 aa5.58□□□□□ -1.52
SCN3A-208ENST00000638473 ZNF518AQ6AHZ1 1483 aa5.58□□□□□ -1.52
SCN3A-208ENST00000638473 DIAPH1O60610 1272 aaKnown RBP5.57□□□□□ -1.52
SCN3A-208ENST00000638473 SMC4Q9NTJ3 1288 aa5.57□□□□□ -1.52
SCN3A-208ENST00000638473 DNMT1P26358 1616 aaKnown RBP5.57□□□□□ -1.52
SCN3A-208ENST00000638473 WASHC2AQ641Q2 1341 aa5.57□□□□□ -1.52
SCN3A-208ENST00000638473 KDM5BQ9UGL1 1544 aa5.57□□□□□ -1.52
SCN3A-208ENST00000638473 PROSER2Q86WR7 435 aaPredicted RBP5.57□□□□□ -1.52
SCN3A-208ENST00000638473 PMFBP1Q8TBY8 1022 aa5.57□□□□□ -1.52
SCN3A-208ENST00000638473 DDRGK1Q96HY6 314 aa5.57□□□□□ -1.52
SCN3A-208ENST00000638473 GGNBP2Q9H3C7 697 aa5.57□□□□□ -1.52
SCN3A-208ENST00000638473 ZCCHC11Q5TAX3 1644 aaKnown RBP5.57□□□□□ -1.52
SCN3A-208ENST00000638473 TCOF1Q13428 1488 aaKnown RBP5.57□□□□□ -1.52
SCN3A-208ENST00000638473 FBXO31Q5XUX0 539 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-208ENST00000638473 STK31Q9BXU1 1019 aa5.56□□□□□ -1.52
SCN3A-208ENST00000638473 DHX29Q7Z478 1369 aaKnown RBP5.56□□□□□ -1.52
SCN3A-208ENST00000638473 RTEL1-TNFRSF6BF6WH68 1400 aa5.56□□□□□ -1.52
SCN3A-208ENST00000638473 BECN1Q14457 450 aa5.56□□□□□ -1.52
SCN3A-208ENST00000638473 SLC26A8Q96RN1 970 aa5.56□□□□□ -1.52
SCN3A-208ENST00000638473 A2MP01023 1474 aa5.56□□□□□ -1.52
SCN3A-208ENST00000638473 APBB1O00213 710 aa5.56□□□□□ -1.52
SCN3A-208ENST00000638473 ABTB2Q8N961 1025 aa5.56□□□□□ -1.52
SCN3A-208ENST00000638473 CEBPAP49715 358 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-208ENST00000638473 GPRASP1Q5JY77 1395 aa5.55□□□□□ -1.52
SCN3A-208ENST00000638473 TRAPPC8Q9Y2L5 1435 aa5.55□□□□□ -1.52
SCN3A-208ENST00000638473 SLC4A10Q6U841 1118 aa5.55□□□□□ -1.52
SCN3A-208ENST00000638473 ANKRD30BQ9BXX2 1392 aa5.55□□□□□ -1.52
SCN3A-208ENST00000638473 PTPRKQ15262 1439 aa5.55□□□□□ -1.52
SCN3A-208ENST00000638473 HMOX1P09601 288 aa5.55□□□□□ -1.52
SCN3A-208ENST00000638473 NBR1Q14596 966 aa5.55□□□□□ -1.52
SCN3A-208ENST00000638473 EIF5BO60841 1220 aaKnown RBP5.54□□□□□ -1.52
SCN3A-208ENST00000638473 CHMP3Q9Y3E7 222 aa5.54□□□□□ -1.52
SCN3A-208ENST00000638473 RIPK4P57078 832 aa5.54□□□□□ -1.52
SCN3A-208ENST00000638473 CABP1Q9NZU7 370 aa5.54□□□□□ -1.52
SCN3A-208ENST00000638473 PDE3BQ13370 1112 aa5.54□□□□□ -1.52
SCN3A-208ENST00000638473 NLRP6P59044 892 aa5.54□□□□□ -1.52
SCN3A-208ENST00000638473 RUNDC1Q96C34 613 aa5.54□□□□□ -1.52
SCN3A-208ENST00000638473 NOS1P29475 1434 aa5.54□□□□□ -1.52
SCN3A-208ENST00000638473 APAF1O14727 1248 aa5.54□□□□□ -1.52
SCN3A-208ENST00000638473 E9PSI1 815 aa5.53□□□□□ -1.52
SCN3A-208ENST00000638473 ELL2O00472 640 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-208ENST00000638473 WAPLQ7Z5K2 1190 aa5.53□□□□□ -1.52
SCN3A-208ENST00000638473 PPP6R1Q9UPN7 881 aa5.53□□□□□ -1.52
SCN3A-208ENST00000638473 ABCA8O94911 1581 aa5.53□□□□□ -1.52
SCN3A-208ENST00000638473 CLUAP1Q96AJ1 413 aa5.53□□□□□ -1.52
SCN3A-208ENST00000638473 SLC12A5Q9H2X9 1139 aa5.53□□□□□ -1.52
SCN3A-208ENST00000638473 NECTIN2Q92692 538 aa5.53□□□□□ -1.52
SCN3A-208ENST00000638473 CHMP4AQ9BY43 222 aa5.53□□□□□ -1.52
SCN3A-208ENST00000638473 SMG6Q86US8 1419 aaKnown RBP5.52□□□□□ -1.53
SCN3A-208ENST00000638473 ABCC10Q5T3U5 1492 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 SYTL4Q96C24 671 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-208ENST00000638473 TAOK2Q9UL54 1235 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCN3A-208ENST00000638473 MAST1Q9Y2H9 1570 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 ATP7AQ04656 1500 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 ANP32BQ92688 251 aaKnown RBP5.52□□□□□ -1.53
SCN3A-208ENST00000638473 ADGRF5Q8IZF2 1346 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 GCC2Q8IWJ2 1684 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 SHANK2Q9UPX8 1470 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 KCNJ4P48050 445 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 PIP4K2BP78356 416 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 TEFQ10587 303 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 TTC5Q8N0Z6 440 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 NGEFQ8N5V2 710 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 RWDD1Q9H446 243 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-208ENST00000638473 MAGI3Q5TCQ9 1506 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 EIF2S2P20042 333 aaKnown RBP5.52□□□□□ -1.53
SCN3A-208ENST00000638473 MTHFSP49914 203 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 TAF7LQ5H9L4 462 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 PPP2R1AP30153 589 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 BCL2L13Q9BXK5 485 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 ZNF692Q9BU19 519 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-208ENST00000638473 TNRQ92752 1358 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 IDI1Q13907 227 aa5.52□□□□□ -1.53
SCN3A-208ENST00000638473 RPRD2Q5VT52 1461 aaKnown RBP5.51□□□□□ -1.53
SCN3A-208ENST00000638473 PLIN1O60240 522 aa5.51□□□□□ -1.53
SCN3A-208ENST00000638473 ZBED9Q6R2W3 1325 aa5.51□□□□□ -1.53
SCN3A-208ENST00000638473 EIF2AK4Q9P2K8 1649 aaKnown RBP5.51□□□□□ -1.53
SCN3A-208ENST00000638473 BRD4O60885 1362 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-208ENST00000638473 TPRNQ4KMQ1 711 aa5.51□□□□□ -1.53
SCN3A-208ENST00000638473 NAP1L2Q9ULW6 460 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-208ENST00000638473 MAPKBP1O60336 1514 aa5.51□□□□□ -1.53
SCN3A-208ENST00000638473 XPCQ01831 940 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-208ENST00000638473 CFAP65Q6ZU64 1925 aaKnown RBP5.51□□□□□ -1.53
SCN3A-208ENST00000638473 NUTM2BA6NNL0 878 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-208ENST00000638473 NUTM2EB1AL46 878 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-208ENST00000638473 HSP90AB1P08238 724 aaKnown RBP5.5□□□□□ -1.53
SCN3A-208ENST00000638473 NUTM2AQ8IVF1 878 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-208ENST00000638473 RAPGEF4Q8WZA2 1011 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 NLRP2Q9NX02 1062 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 NSD3Q9BZ95 1437 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 NUDT16Q96DE0 195 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms