RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 TMF1P82094 1093 aa10.76□□□□□ -0.69
GABRB3-225ENST00000638099 TMEM132EQ6IEE7 984 aa10.76□□□□□ -0.69
GABRB3-225ENST00000638099 CFAP74Q9C0B2 1584 aa10.76□□□□□ -0.69
GABRB3-225ENST00000638099 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
GABRB3-225ENST00000638099 RNF17Q9BXT8 1623 aaKnown RBP10.75□□□□□ -0.69
GABRB3-225ENST00000638099 NOS1P29475 1434 aa10.75□□□□□ -0.69
GABRB3-225ENST00000638099 NEO1Q92859 1461 aa10.74□□□□□ -0.69
GABRB3-225ENST00000638099 COL17A1Q9UMD9 1497 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-225ENST00000638099 MAP3K4Q9Y6R4 1608 aa10.74□□□□□ -0.69
GABRB3-225ENST00000638099 DIP2CQ9Y2E4 1556 aa10.74□□□□□ -0.69
GABRB3-225ENST00000638099 PER1O15534 1290 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-225ENST00000638099 FBXO31Q5XUX0 539 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-225ENST00000638099 TRAK1Q9UPV9 953 aa10.74□□□□□ -0.69
GABRB3-225ENST00000638099 KIF1BO60333 1816 aa10.73□□□□□ -0.69
GABRB3-225ENST00000638099 RICTORQ6R327 1708 aa10.73□□□□□ -0.69
GABRB3-225ENST00000638099 NEFLP07196 543 aa10.73□□□□□ -0.69
GABRB3-225ENST00000638099 ABCC3O15438 1527 aa10.72□□□□□ -0.69
GABRB3-225ENST00000638099 SIGLEC1Q9BZZ2 1709 aa10.72□□□□□ -0.69
GABRB3-225ENST00000638099 SAFB2Q14151 953 aaKnown RBP eCLIP10.71□□□□□ -0.69
GABRB3-225ENST00000638099 PNISRQ8TF01 805 aaKnown RBP10.71□□□□□ -0.69
GABRB3-225ENST00000638099 IDI1Q13907 227 aa10.71□□□□□ -0.69
GABRB3-225ENST00000638099 DIP2BQ9P265 1576 aa10.7□□□□□ -0.7
GABRB3-225ENST00000638099 MYBBP1AQ9BQG0 1328 aaKnown RBP10.7□□□□□ -0.7
GABRB3-225ENST00000638099 SCAF11Q99590 1463 aaKnown RBP10.7□□□□□ -0.7
GABRB3-225ENST00000638099 KTN1Q86UP2 1357 aaKnown RBP10.7□□□□□ -0.7
GABRB3-225ENST00000638099 IQGAP1P46940 1657 aa10.7□□□□□ -0.7
GABRB3-225ENST00000638099 LAMC1P11047 1609 aa10.69□□□□□ -0.7
GABRB3-225ENST00000638099 CAMSAP1Q5T5Y3 1602 aa10.69□□□□□ -0.7
GABRB3-225ENST00000638099 LMTK2Q8IWU2 1503 aa10.68□□□□□ -0.7
GABRB3-225ENST00000638099 STK26Q9P289 416 aa10.68□□□□□ -0.7
GABRB3-225ENST00000638099 ZBED9Q6R2W3 1325 aa10.68□□□□□ -0.7
GABRB3-225ENST00000638099 RALBP1Q15311 655 aa10.68□□□□□ -0.7
GABRB3-225ENST00000638099 KNSTRNQ9Y448 316 aa10.67□□□□□ -0.7
GABRB3-225ENST00000638099 ADGRB3O60242 1522 aa10.67□□□□□ -0.7
GABRB3-225ENST00000638099 SYNMO15061 1565 aa10.67□□□□□ -0.7
GABRB3-225ENST00000638099 PARD3Q8TEW0 1356 aa10.66□□□□□ -0.7
GABRB3-225ENST00000638099 NLRP13Q86W25 1043 aa10.65□□□□□ -0.7
GABRB3-225ENST00000638099 IFT172Q9UG01 1749 aa10.65□□□□□ -0.7
GABRB3-225ENST00000638099 GLI2P10070 1586 aa10.65□□□□□ -0.7
GABRB3-225ENST00000638099 MYO5BQ9ULV0 1848 aa10.65□□□□□ -0.7
GABRB3-225ENST00000638099 MYOM2P54296 1465 aa10.64□□□□□ -0.71
GABRB3-225ENST00000638099 STAG3Q9UJ98 1225 aa10.64□□□□□ -0.71
GABRB3-225ENST00000638099 BRD4O60885 1362 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-225ENST00000638099 EIF3AQ14152 1382 aaKnown RBP10.64□□□□□ -0.71
GABRB3-225ENST00000638099 TNNT2P45379 298 aaPredicted RBP10.64□□□□□ -0.71
GABRB3-225ENST00000638099 C14orf93Q9H972 538 aaKnown RBP10.64□□□□□ -0.71
GABRB3-225ENST00000638099 PPLO60437 1756 aa10.63□□□□□ -0.71
GABRB3-225ENST00000638099 CENPJQ9HC77 1338 aaPredicted RBP10.63□□□□□ -0.71
GABRB3-225ENST00000638099 ERVK-7P63135 1459 aa10.63□□□□□ -0.71
GABRB3-225ENST00000638099 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
GABRB3-225ENST00000638099 STAC3Q96MF2 364 aa10.63□□□□□ -0.71
GABRB3-225ENST00000638099 CARD14Q9BXL6 1004 aa10.63□□□□□ -0.71
GABRB3-225ENST00000638099 SLC12A5Q9H2X9 1139 aa10.63□□□□□ -0.71
GABRB3-225ENST00000638099 PIK3C2GO75747 1445 aa10.63□□□□□ -0.71
GABRB3-225ENST00000638099 ILDR1Q86SU0 546 aaPredicted RBP10.62□□□□□ -0.71
GABRB3-225ENST00000638099 PPP2R1AP30153 589 aa10.61□□□□□ -0.71
GABRB3-225ENST00000638099 KIF13AQ9H1H9 1805 aa10.61□□□□□ -0.71
GABRB3-225ENST00000638099 MYOM1P52179 1685 aa10.61□□□□□ -0.71
GABRB3-225ENST00000638099 VGFO15240 615 aaPredicted RBP10.6□□□□□ -0.71
GABRB3-225ENST00000638099 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
GABRB3-225ENST00000638099 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
GABRB3-225ENST00000638099 NRXN1Q9ULB1 1477 aa10.6□□□□□ -0.71
GABRB3-225ENST00000638099 LRPPRCP42704 1394 aaKnown RBP10.6□□□□□ -0.71
GABRB3-225ENST00000638099 CABP2Q9NPB3 220 aa10.6□□□□□ -0.71
GABRB3-225ENST00000638099 ADAMTS8Q9UP79 889 aa10.6□□□□□ -0.71
GABRB3-225ENST00000638099 KIAA1210Q9ULL0 1709 aa10.6□□□□□ -0.71
GABRB3-225ENST00000638099 PIK3C2BO00750 1634 aa10.6□□□□□ -0.71
GABRB3-225ENST00000638099 NEXMIFQ5QGS0 1516 aa10.59□□□□□ -0.71
GABRB3-225ENST00000638099 KDM5AP29375 1690 aaKnown RBP10.59□□□□□ -0.71
GABRB3-225ENST00000638099 PREX1Q8TCU6 1659 aa10.59□□□□□ -0.71
GABRB3-225ENST00000638099 CLTCQ00610 1675 aaKnown RBP10.59□□□□□ -0.71
GABRB3-225ENST00000638099 ADGRB1O14514 1584 aa10.58□□□□□ -0.72
GABRB3-225ENST00000638099 B4GALNT3Q6L9W6 998 aa10.58□□□□□ -0.72
GABRB3-225ENST00000638099 CCDC146Q8IYE0 955 aa10.58□□□□□ -0.72
GABRB3-225ENST00000638099 SLC52A1Q9NWF4 448 aa10.58□□□□□ -0.72
GABRB3-225ENST00000638099 NUDCQ9Y266 331 aa10.58□□□□□ -0.72
GABRB3-225ENST00000638099 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
GABRB3-225ENST00000638099 RPGRIP1LQ68CZ1 1315 aa10.58□□□□□ -0.72
GABRB3-225ENST00000638099 ZMYM4Q5VZL5 1548 aa10.58□□□□□ -0.72
GABRB3-225ENST00000638099 NEURL4Q96JN8 1562 aa10.57□□□□□ -0.72
GABRB3-225ENST00000638099 ESF1Q9H501 851 aaKnown RBP10.57□□□□□ -0.72
GABRB3-225ENST00000638099 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
GABRB3-225ENST00000638099 QRICH2Q9H0J4 1663 aa10.57□□□□□ -0.72
GABRB3-225ENST00000638099 ARHGAP31Q2M1Z3 1444 aa10.57□□□□□ -0.72
GABRB3-225ENST00000638099 CEBPAP49715 358 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-225ENST00000638099 BCL11AQ9H165 835 aa10.56□□□□□ -0.72
GABRB3-225ENST00000638099 ASXL1Q8IXJ9 1541 aa10.56□□□□□ -0.72
GABRB3-225ENST00000638099 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-225ENST00000638099 PRAM1Q96QH2 718 aa10.55□□□□□ -0.72
GABRB3-225ENST00000638099 ZC3H13Q5T200 1668 aaKnown RBP10.55□□□□□ -0.72
GABRB3-225ENST00000638099 SRPK2P78362 688 aaKnown RBP10.55□□□□□ -0.72
GABRB3-225ENST00000638099 SMG6Q86US8 1419 aaKnown RBP10.55□□□□□ -0.72
GABRB3-225ENST00000638099 TMEM131LA2VDJ0 1609 aa10.55□□□□□ -0.72
GABRB3-225ENST00000638099 WDR43Q15061 677 aaKnown RBP eCLIP10.54□□□□□ -0.72
GABRB3-225ENST00000638099 NSD3Q9BZ95 1437 aa10.54□□□□□ -0.72
GABRB3-225ENST00000638099 POGKQ9P215 609 aa10.54□□□□□ -0.72
GABRB3-225ENST00000638099 WAPLQ7Z5K2 1190 aa10.54□□□□□ -0.72
GABRB3-225ENST00000638099 SETBP1Q9Y6X0 1596 aa10.53□□□□□ -0.72
GABRB3-225ENST00000638099 ARHGEF28Q8N1W1 1705 aaKnown RBP10.52□□□□□ -0.73
GABRB3-225ENST00000638099 PLIN1O60240 522 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms