RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 HOOK1Q9UJC3 728 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 TAF3Q5VWG9 929 aa13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 ERCC4Q92889 916 aaPredicted RBP13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 PES1O00541 588 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 ZKSCAN1P17029 563 aaPredicted RBP13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
SMARCA2-258ENST00000637103 RRP7AQ9Y3A4 280 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-258ENST00000637103 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
SMARCA2-258ENST00000637103 CCDC18Q5T9S5 1454 aa13.73□□□□□ -0.21
SMARCA2-258ENST00000637103 RBM10P98175 930 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-258ENST00000637103 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
SMARCA2-258ENST00000637103 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
SMARCA2-258ENST00000637103 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
SMARCA2-258ENST00000637103 CECR2Q9BXF3 1484 aa13.73□□□□□ -0.21
SMARCA2-258ENST00000637103 STK26Q9P289 416 aa13.72□□□□□ -0.21
SMARCA2-258ENST00000637103 CCP110O43303 1012 aa13.72□□□□□ -0.21
SMARCA2-258ENST00000637103 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
SMARCA2-258ENST00000637103 RDXP35241 583 aaKnown RBP13.71□□□□□ -0.21
SMARCA2-258ENST00000637103 NAT10Q9H0A0 1025 aaKnown RBP13.71□□□□□ -0.21
SMARCA2-258ENST00000637103 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
SMARCA2-258ENST00000637103 CDC45O75419 566 aa13.71□□□□□ -0.21
SMARCA2-258ENST00000637103 GRPEL1Q9HAV7 217 aa13.71□□□□□ -0.21
SMARCA2-258ENST00000637103 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.22
SMARCA2-258ENST00000637103 APAF1O14727 1248 aa13.7□□□□□ -0.22
SMARCA2-258ENST00000637103 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
SMARCA2-258ENST00000637103 CCDC73Q6ZRK6 1079 aa13.7□□□□□ -0.22
SMARCA2-258ENST00000637103 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-258ENST00000637103 LEKR1Q6ZMV7 388 aa13.7□□□□□ -0.22
SMARCA2-258ENST00000637103 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-258ENST00000637103 BRD4O60885 1362 aaPredicted RBP13.7□□□□□ -0.22
SMARCA2-258ENST00000637103 RNF20Q5VTR2 975 aa13.69□□□□□ -0.22
SMARCA2-258ENST00000637103 CHMP3Q9Y3E7 222 aa13.69□□□□□ -0.22
SMARCA2-258ENST00000637103 UQCRHLA0A096LP55 91 aa13.69□□□□□ -0.22
SMARCA2-258ENST00000637103 UQCRHP07919 91 aa13.69□□□□□ -0.22
SMARCA2-258ENST00000637103 TAF7LQ5H9L4 462 aa13.69□□□□□ -0.22
SMARCA2-258ENST00000637103 H0YHG0 523 aa13.68□□□□□ -0.22
SMARCA2-258ENST00000637103 DHX8Q14562 1220 aaKnown RBP13.68□□□□□ -0.22
SMARCA2-258ENST00000637103 RRP12Q5JTH9 1297 aaKnown RBP13.68□□□□□ -0.22
SMARCA2-258ENST00000637103 VPS37CA5D8V6 355 aaPredicted RBP13.68□□□□□ -0.22
SMARCA2-258ENST00000637103 ESPNB1AK53 854 aa13.68□□□□□ -0.22
SMARCA2-258ENST00000637103 TRIM29Q14134 588 aa13.68□□□□□ -0.22
SMARCA2-258ENST00000637103 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
SMARCA2-258ENST00000637103 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
SMARCA2-258ENST00000637103 LRRFIP1Q32MZ4 808 aaKnown RBP13.67□□□□□ -0.22
SMARCA2-258ENST00000637103 RNF214Q8ND24 703 aa13.67□□□□□ -0.22
SMARCA2-258ENST00000637103 CCDC47Q96A33 483 aaKnown RBP13.67□□□□□ -0.22
SMARCA2-258ENST00000637103 RSPH4AQ5TD94 716 aa13.67□□□□□ -0.22
SMARCA2-258ENST00000637103 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
SMARCA2-258ENST00000637103 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
SMARCA2-258ENST00000637103 MCM2P49736 904 aa13.66□□□□□ -0.22
SMARCA2-258ENST00000637103 CCDC191Q8NCU4 936 aa13.66□□□□□ -0.22
SMARCA2-258ENST00000637103 UACAQ9BZF9 1416 aa13.66□□□□□ -0.22
SMARCA2-258ENST00000637103 PDE4CQ08493 712 aa13.66□□□□□ -0.22
SMARCA2-258ENST00000637103 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
SMARCA2-258ENST00000637103 CARMIL2Q6F5E8 1435 aa13.65□□□□□ -0.22
SMARCA2-258ENST00000637103 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
SMARCA2-258ENST00000637103 RAPGEF2Q9Y4G8 1499 aa13.65□□□□□ -0.22
SMARCA2-258ENST00000637103 TOMM22Q9NS69 142 aa13.65□□□□□ -0.22
SMARCA2-258ENST00000637103 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
SMARCA2-258ENST00000637103 RABEP1Q15276 862 aa13.65□□□□□ -0.22
SMARCA2-258ENST00000637103 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
SMARCA2-258ENST00000637103 TRIM5Q9C035 493 aa13.64□□□□□ -0.23
SMARCA2-258ENST00000637103 CWC22Q9HCG8 908 aaKnown RBP13.64□□□□□ -0.23
SMARCA2-258ENST00000637103 UBE2Q2Q8WVN8 375 aa13.64□□□□□ -0.23
SMARCA2-258ENST00000637103 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
SMARCA2-258ENST00000637103 LNPKQ9C0E8 428 aa13.64□□□□□ -0.23
SMARCA2-258ENST00000637103 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
SMARCA2-258ENST00000637103 OLFM4Q6UX06 510 aa13.63□□□□□ -0.23
SMARCA2-258ENST00000637103 SMG6Q86US8 1419 aaKnown RBP13.63□□□□□ -0.23
SMARCA2-258ENST00000637103 MARCH6O60337 910 aa13.63□□□□□ -0.23
SMARCA2-258ENST00000637103 PDCL2Q8N4E4 241 aa13.63□□□□□ -0.23
SMARCA2-258ENST00000637103 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
SMARCA2-258ENST00000637103 CCDC112Q8NEF3 446 aa13.62□□□□□ -0.23
SMARCA2-258ENST00000637103 NINLQ9Y2I6 1382 aa13.62□□□□□ -0.23
SMARCA2-258ENST00000637103 CPLX1O14810 134 aa13.62□□□□□ -0.23
SMARCA2-258ENST00000637103 FHOD3Q2V2M9 1422 aa13.62□□□□□ -0.23
SMARCA2-258ENST00000637103 TSPYL1Q9H0U9 437 aa13.62□□□□□ -0.23
SMARCA2-258ENST00000637103 MIA2Q96PC5 1412 aa13.61□□□□□ -0.23
SMARCA2-258ENST00000637103 ZSCAN30Q86W11 494 aa13.61□□□□□ -0.23
SMARCA2-258ENST00000637103 TOP2AP11388 1531 aaKnown RBP13.61□□□□□ -0.23
SMARCA2-258ENST00000637103 ELL2O00472 640 aaPredicted RBP13.61□□□□□ -0.23
SMARCA2-258ENST00000637103 IFIT2P09913 472 aaKnown RBP13.6□□□□□ -0.23
SMARCA2-258ENST00000637103 USP8P40818 1118 aa13.6□□□□□ -0.23
SMARCA2-258ENST00000637103 PANK1Q8TE04 598 aa13.6□□□□□ -0.23
SMARCA2-258ENST00000637103 MCM4P33991 863 aa13.6□□□□□ -0.23
SMARCA2-258ENST00000637103 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
SMARCA2-258ENST00000637103 EFCAB2Q5VUJ9 269 aa13.59□□□□□ -0.23
SMARCA2-258ENST00000637103 PDE3AQ14432 1141 aa13.59□□□□□ -0.23
SMARCA2-258ENST00000637103 PDCL3Q9H2J4 239 aa13.59□□□□□ -0.23
SMARCA2-258ENST00000637103 ERC2O15083 957 aa13.59□□□□□ -0.23
SMARCA2-258ENST00000637103 GGT6Q6P531 493 aa13.59□□□□□ -0.23
SMARCA2-258ENST00000637103 CAGE1Q8TC20 777 aa13.59□□□□□ -0.23
SMARCA2-258ENST00000637103 PDZRN3Q9UPQ7 1066 aa13.59□□□□□ -0.23
SMARCA2-258ENST00000637103 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
SMARCA2-258ENST00000637103 PSMA5P28066 241 aa13.58□□□□□ -0.24
SMARCA2-258ENST00000637103 EVC2Q86UK5 1308 aa13.57□□□□□ -0.24
SMARCA2-258ENST00000637103 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
SMARCA2-258ENST00000637103 EIF3JO75822 258 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms