RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 L3MBTL2Q969R5 705 aa11.79□□□□□ -0.52
CACNA1A-232ENST00000636966 NRXN3Q9Y4C0 1643 aa11.79□□□□□ -0.52
CACNA1A-232ENST00000636966 YTHDC1Q96MU7 727 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-232ENST00000636966 MYO5BQ9ULV0 1848 aa11.78□□□□□ -0.52
CACNA1A-232ENST00000636966 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.53
CACNA1A-232ENST00000636966 SETBP1Q9Y6X0 1596 aa11.77□□□□□ -0.53
CACNA1A-232ENST00000636966 SPATA31E1Q6ZUB1 1445 aa11.77□□□□□ -0.53
CACNA1A-232ENST00000636966 CEBPAP49715 358 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-232ENST00000636966 ZMYM3Q14202 1370 aa11.76□□□□□ -0.53
CACNA1A-232ENST00000636966 CCDC144AA2RUR9 1427 aa11.76□□□□□ -0.53
CACNA1A-232ENST00000636966 PPP1R15AO75807 674 aaPredicted RBP11.75□□□□□ -0.53
CACNA1A-232ENST00000636966 NBPF8Q3BBV2 869 aa11.75□□□□□ -0.53
CACNA1A-232ENST00000636966 MYOM2P54296 1465 aa11.75□□□□□ -0.53
CACNA1A-232ENST00000636966 ERVK-7P63135 1459 aa11.74□□□□□ -0.53
CACNA1A-232ENST00000636966 RGL3Q3MIN7 710 aa11.73□□□□□ -0.53
CACNA1A-232ENST00000636966 TONSLQ96HA7 1378 aa11.73□□□□□ -0.53
CACNA1A-232ENST00000636966 IDI1Q13907 227 aa11.73□□□□□ -0.53
CACNA1A-232ENST00000636966 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
CACNA1A-232ENST00000636966 NEXMIFQ5QGS0 1516 aa11.71□□□□□ -0.53
CACNA1A-232ENST00000636966 SLIT1O75093 1534 aa11.71□□□□□ -0.54
CACNA1A-232ENST00000636966 ZFYVE9O95405 1425 aa11.7□□□□□ -0.54
CACNA1A-232ENST00000636966 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
CACNA1A-232ENST00000636966 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
CACNA1A-232ENST00000636966 DCAF11Q8TEB1 546 aa11.69□□□□□ -0.54
CACNA1A-232ENST00000636966 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
CACNA1A-232ENST00000636966 ARHGAP23Q9P227 1491 aa11.68□□□□□ -0.54
CACNA1A-232ENST00000636966 DIP2AQ14689 1571 aa11.67□□□□□ -0.54
CACNA1A-232ENST00000636966 NWD1Q149M9 1564 aa11.66□□□□□ -0.54
CACNA1A-232ENST00000636966 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-232ENST00000636966 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
CACNA1A-232ENST00000636966 ADGRF5Q8IZF2 1346 aa11.65□□□□□ -0.54
CACNA1A-232ENST00000636966 HIRIP3Q9BW71 556 aaPredicted RBP11.65□□□□□ -0.55
CACNA1A-232ENST00000636966 XRN1Q8IZH2 1706 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-232ENST00000636966 MED14O60244 1454 aa11.64□□□□□ -0.55
CACNA1A-232ENST00000636966 ZNF326Q5BKZ1 582 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-232ENST00000636966 A2ML1A8K2U0 1454 aa11.64□□□□□ -0.55
CACNA1A-232ENST00000636966 ADGRB1O14514 1584 aa11.63□□□□□ -0.55
CACNA1A-232ENST00000636966 NBPF1Q3BBV0 1214 aa11.63□□□□□ -0.55
CACNA1A-232ENST00000636966 ESF1Q9H501 851 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-232ENST00000636966 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-232ENST00000636966 SLC52A1Q9NWF4 448 aa11.63□□□□□ -0.55
CACNA1A-232ENST00000636966 TNRQ92752 1358 aa11.62□□□□□ -0.55
CACNA1A-232ENST00000636966 ADGRB2O60241 1585 aa11.62□□□□□ -0.55
CACNA1A-232ENST00000636966 ARHGEF28Q8N1W1 1705 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-232ENST00000636966 MIER1Q8N108 512 aa11.62□□□□□ -0.55
CACNA1A-232ENST00000636966 PTPRMP28827 1452 aa11.62□□□□□ -0.55
CACNA1A-232ENST00000636966 TOPAZ1Q8N9V7 1692 aa11.6□□□□□ -0.55
CACNA1A-232ENST00000636966 GPRASP1Q5JY77 1395 aa11.59□□□□□ -0.55
CACNA1A-232ENST00000636966 ASXL1Q8IXJ9 1541 aa11.59□□□□□ -0.55
CACNA1A-232ENST00000636966 MYOM1P52179 1685 aa11.59□□□□□ -0.55
CACNA1A-232ENST00000636966 PIK3C2GO75747 1445 aa11.58□□□□□ -0.56
CACNA1A-232ENST00000636966 RALGAPBQ86X10 1494 aa11.58□□□□□ -0.56
CACNA1A-232ENST00000636966 DLC1Q96QB1 1528 aa11.58□□□□□ -0.56
CACNA1A-232ENST00000636966 NLRP1Q9C000 1473 aa11.57□□□□□ -0.56
CACNA1A-232ENST00000636966 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
CACNA1A-232ENST00000636966 STRCQ7RTU9 1775 aa11.57□□□□□ -0.56
CACNA1A-232ENST00000636966 CHD2O14647 1828 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-232ENST00000636966 LTKP29376 864 aa11.56□□□□□ -0.56
CACNA1A-232ENST00000636966 CPS1P31327 1500 aa11.56□□□□□ -0.56
CACNA1A-232ENST00000636966 USP32Q8NFA0 1604 aa11.56□□□□□ -0.56
CACNA1A-232ENST00000636966 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
CACNA1A-232ENST00000636966 GTF3C3Q9Y5Q9 886 aa11.55□□□□□ -0.56
CACNA1A-232ENST00000636966 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-232ENST00000636966 XIRP1Q702N8 1843 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-232ENST00000636966 ZBTB22O15209 634 aa11.54□□□□□ -0.56
CACNA1A-232ENST00000636966 CEP170BQ9Y4F5 1589 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-232ENST00000636966 RIMS2Q9UQ26 1411 aa11.54□□□□□ -0.56
CACNA1A-232ENST00000636966 HSPA5P11021 654 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-232ENST00000636966 TMEM2Q9UHN6 1383 aa11.54□□□□□ -0.56
CACNA1A-232ENST00000636966 ROCK2O75116 1388 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-232ENST00000636966 TMEM132EQ6IEE7 984 aa11.53□□□□□ -0.56
CACNA1A-232ENST00000636966 LMTK3Q96Q04 1460 aa11.53□□□□□ -0.56
CACNA1A-232ENST00000636966 RPGRIP1LQ68CZ1 1315 aa11.52□□□□□ -0.56
CACNA1A-232ENST00000636966 RNF216Q9NWF9 866 aaPredicted RBP11.52□□□□□ -0.57
CACNA1A-232ENST00000636966 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.57
CACNA1A-232ENST00000636966 C14orf93Q9H972 538 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-232ENST00000636966 USP47Q96K76 1375 aa11.51□□□□□ -0.57
CACNA1A-232ENST00000636966 CARD11Q9BXL7 1154 aa11.51□□□□□ -0.57
CACNA1A-232ENST00000636966 ALKQ9UM73 1620 aa11.5□□□□□ -0.57
CACNA1A-232ENST00000636966 SETD1BQ9UPS6 1966 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-232ENST00000636966 VGFO15240 615 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-232ENST00000636966 TECPR2O15040 1411 aa11.49□□□□□ -0.57
CACNA1A-232ENST00000636966 ST20-MTHFSA0A0A6YYL1 179 aa11.49□□□□□ -0.57
CACNA1A-232ENST00000636966 ADAMTS13Q76LX8 1427 aa11.48□□□□□ -0.57
CACNA1A-232ENST00000636966 METP08581 1390 aa11.48□□□□□ -0.57
CACNA1A-232ENST00000636966 NRKQ7Z2Y5 1582 aa11.48□□□□□ -0.57
CACNA1A-232ENST00000636966 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
CACNA1A-232ENST00000636966 ANKRD26Q9UPS8 1709 aa11.48□□□□□ -0.57
CACNA1A-232ENST00000636966 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
CACNA1A-232ENST00000636966 TESK2Q96S53 571 aa11.47□□□□□ -0.57
CACNA1A-232ENST00000636966 MARF1Q9Y4F3 1742 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-232ENST00000636966 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-232ENST00000636966 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
CACNA1A-232ENST00000636966 EIF4G2P78344 907 aaKnown RBP eCLIP11.47□□□□□ -0.57
CACNA1A-232ENST00000636966 WASHC2AQ641Q2 1341 aa11.47□□□□□ -0.57
CACNA1A-232ENST00000636966 AKAP12Q02952 1782 aa11.46□□□□□ -0.57
CACNA1A-232ENST00000636966 TXNDC2Q86VQ3 553 aa11.46□□□□□ -0.57
CACNA1A-232ENST00000636966 HSPA2P54652 639 aa11.45□□□□□ -0.58
CACNA1A-232ENST00000636966 THEMISQ8N1K5 641 aaPredicted RBP11.44□□□□□ -0.58
CACNA1A-232ENST00000636966 SLC26A8Q96RN1 970 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms