RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
CLN6-215ENST00000636674 NEURL4Q96JN8 1562 aa19.29■□□□□ 0.68
CLN6-215ENST00000636674 KIAA1210Q9ULL0 1709 aa19.29■□□□□ 0.68
CLN6-215ENST00000636674 SCAPERQ9BY12 1400 aa19.29■□□□□ 0.68
CLN6-215ENST00000636674 STAC3Q96MF2 364 aa19.27■□□□□ 0.68
CLN6-215ENST00000636674 RTEL1-TNFRSF6BF6WH68 1400 aa19.27■□□□□ 0.68
CLN6-215ENST00000636674 PTPRTO14522 1441 aa19.27■□□□□ 0.67
CLN6-215ENST00000636674 CC2D1BQ5T0F9 858 aaKnown RBP19.27■□□□□ 0.67
CLN6-215ENST00000636674 TET3O43151 1660 aa19.26■□□□□ 0.67
CLN6-215ENST00000636674 MYOM1P52179 1685 aa19.26■□□□□ 0.67
CLN6-215ENST00000636674 ZFYVE16Q7Z3T8 1539 aa19.26■□□□□ 0.67
CLN6-215ENST00000636674 CDCA7LQ96GN5 454 aa19.26■□□□□ 0.67
CLN6-215ENST00000636674 ZBTB47Q9UFB7 747 aaPredicted RBP19.25■□□□□ 0.67
CLN6-215ENST00000636674 SCAF11Q99590 1463 aaKnown RBP19.25■□□□□ 0.67
CLN6-215ENST00000636674 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
CLN6-215ENST00000636674 DEKP35659 375 aaKnown RBP19.24■□□□□ 0.67
CLN6-215ENST00000636674 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
CLN6-215ENST00000636674 NEO1Q92859 1461 aa19.23■□□□□ 0.67
CLN6-215ENST00000636674 TRAPPC8Q9Y2L5 1435 aa19.23■□□□□ 0.67
CLN6-215ENST00000636674 NPC1L1Q9UHC9 1359 aa19.23■□□□□ 0.67
CLN6-215ENST00000636674 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
CLN6-215ENST00000636674 PIK3C2GO75747 1445 aa19.23■□□□□ 0.67
CLN6-215ENST00000636674 VWDEQ8N2E2 1590 aa19.23■□□□□ 0.67
CLN6-215ENST00000636674 ASXL1Q8IXJ9 1541 aa19.22■□□□□ 0.67
CLN6-215ENST00000636674 BACH2Q9BYV9 841 aa19.22■□□□□ 0.67
CLN6-215ENST00000636674 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
CLN6-215ENST00000636674 PDE4AP27815 886 aa19.21■□□□□ 0.67
CLN6-215ENST00000636674 CDCA8Q53HL2 280 aa19.2■□□□□ 0.66
CLN6-215ENST00000636674 INO80Q9ULG1 1556 aaPredicted RBP19.2■□□□□ 0.66
CLN6-215ENST00000636674 KDM5AP29375 1690 aaKnown RBP19.19■□□□□ 0.66
CLN6-215ENST00000636674 AMER1Q5JTC6 1135 aaPredicted RBP19.18■□□□□ 0.66
CLN6-215ENST00000636674 ZNF521Q96K83 1311 aa19.18■□□□□ 0.66
CLN6-215ENST00000636674 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
CLN6-215ENST00000636674 NBR1Q14596 966 aa19.17■□□□□ 0.66
CLN6-215ENST00000636674 ADAMTS8Q9UP79 889 aa19.17■□□□□ 0.66
CLN6-215ENST00000636674 KNSTRNQ9Y448 316 aa19.17■□□□□ 0.66
CLN6-215ENST00000636674 CRBNQ96SW2 442 aa19.16■□□□□ 0.66
CLN6-215ENST00000636674 FANCAO15360 1455 aa19.16■□□□□ 0.66
CLN6-215ENST00000636674 EIF3AQ14152 1382 aaKnown RBP19.16■□□□□ 0.66
CLN6-215ENST00000636674 PLEKHH1Q9ULM0 1364 aa19.16■□□□□ 0.66
CLN6-215ENST00000636674 MYOM2P54296 1465 aa19.15■□□□□ 0.66
CLN6-215ENST00000636674 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.65
CLN6-215ENST00000636674 IFT172Q9UG01 1749 aa19.14■□□□□ 0.65
CLN6-215ENST00000636674 ATP7AQ04656 1500 aa19.14■□□□□ 0.65
CLN6-215ENST00000636674 KDM2BQ8NHM5 1336 aa19.13■□□□□ 0.65
CLN6-215ENST00000636674 PLIN1O60240 522 aa19.13■□□□□ 0.65
CLN6-215ENST00000636674 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
CLN6-215ENST00000636674 WDR43Q15061 677 aaKnown RBP eCLIP19.12■□□□□ 0.65
CLN6-215ENST00000636674 MYO3AQ8NEV4 1616 aa19.12■□□□□ 0.65
CLN6-215ENST00000636674 RTL5Q5HYW3 569 aaPredicted RBP19.12■□□□□ 0.65
CLN6-215ENST00000636674 ABCA6Q8N139 1617 aa19.11■□□□□ 0.65
CLN6-215ENST00000636674 MROH1Q8NDA8 1641 aa19.11■□□□□ 0.65
CLN6-215ENST00000636674 FRMPD1Q5SYB0 1578 aa19.1■□□□□ 0.65
CLN6-215ENST00000636674 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
CLN6-215ENST00000636674 RICTORQ6R327 1708 aa19.1■□□□□ 0.65
CLN6-215ENST00000636674 SLC24A1O60721 1099 aa19.09■□□□□ 0.65
CLN6-215ENST00000636674 KIF1BO60333 1816 aa19.08■□□□□ 0.65
CLN6-215ENST00000636674 KANK1Q14678 1352 aa19.08■□□□□ 0.64
CLN6-215ENST00000636674 GOLGA2Q08379 1002 aa19.08■□□□□ 0.64
CLN6-215ENST00000636674 CENPQQ7L2Z9 268 aaPredicted RBP19.07■□□□□ 0.64
CLN6-215ENST00000636674 TRMT2AQ8IZ69 625 aaKnown RBP19.07■□□□□ 0.64
CLN6-215ENST00000636674 USP35Q9P2H5 1018 aa19.07■□□□□ 0.64
CLN6-215ENST00000636674 ERVK-7P63135 1459 aa19.07■□□□□ 0.64
CLN6-215ENST00000636674 ADGRL1O94910 1474 aa19.06■□□□□ 0.64
CLN6-215ENST00000636674 C20orf194Q5TEA3 1177 aa19.06■□□□□ 0.64
CLN6-215ENST00000636674 NPM2Q86SE8 214 aaKnown RBP19.06■□□□□ 0.64
CLN6-215ENST00000636674 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.06■□□□□ 0.64
CLN6-215ENST00000636674 EFCAB6Q5THR3 1501 aa19.06■□□□□ 0.64
CLN6-215ENST00000636674 NRXN1Q9ULB1 1477 aa19.05■□□□□ 0.64
CLN6-215ENST00000636674 DDRGK1Q96HY6 314 aa19.05■□□□□ 0.64
CLN6-215ENST00000636674 SLFN5Q08AF3 891 aa19.05■□□□□ 0.64
CLN6-215ENST00000636674 SBNO2Q9Y2G9 1366 aa19.04■□□□□ 0.64
CLN6-215ENST00000636674 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
CLN6-215ENST00000636674 NGEFQ8N5V2 710 aa19.03■□□□□ 0.64
CLN6-215ENST00000636674 NKTRP30414 1462 aaKnown RBP19.03■□□□□ 0.64
CLN6-215ENST00000636674 LMTK2Q8IWU2 1503 aa19.02■□□□□ 0.64
CLN6-215ENST00000636674 MROH2AA6NES4 1674 aa19.02■□□□□ 0.64
CLN6-215ENST00000636674 SETBP1Q9Y6X0 1596 aa19.02■□□□□ 0.64
CLN6-215ENST00000636674 AFAP1Q8N556 730 aa19.02■□□□□ 0.64
CLN6-215ENST00000636674 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
CLN6-215ENST00000636674 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
CLN6-215ENST00000636674 VIRMAQ69YN4 1812 aaKnown RBP19■□□□□ 0.63
CLN6-215ENST00000636674 ZC3H13Q5T200 1668 aaKnown RBP19■□□□□ 0.63
CLN6-215ENST00000636674 ARHGEF40Q8TER5 1519 aa18.99■□□□□ 0.63
CLN6-215ENST00000636674 ADGRB3O60242 1522 aa18.98■□□□□ 0.63
CLN6-215ENST00000636674 UGGT1Q9NYU2 1555 aa18.98■□□□□ 0.63
CLN6-215ENST00000636674 KIDINS220Q9ULH0 1771 aa18.96■□□□□ 0.63
CLN6-215ENST00000636674 POLR3AO14802 1390 aaPredicted RBP18.96■□□□□ 0.63
CLN6-215ENST00000636674 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
CLN6-215ENST00000636674 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
CLN6-215ENST00000636674 SHPRHQ149N8 1683 aa18.96■□□□□ 0.63
CLN6-215ENST00000636674 E9PSI1 815 aa18.95■□□□□ 0.62
CLN6-215ENST00000636674 ZNF518AQ6AHZ1 1483 aa18.95■□□□□ 0.62
CLN6-215ENST00000636674 FAM161AQ3B820 660 aa18.95■□□□□ 0.62
CLN6-215ENST00000636674 SKAP1Q86WV1 359 aa18.95■□□□□ 0.62
CLN6-215ENST00000636674 PPLO60437 1756 aa18.93■□□□□ 0.62
CLN6-215ENST00000636674 NEFMP07197 916 aa18.93■□□□□ 0.62
CLN6-215ENST00000636674 C8orf34Q49A92 452 aa18.93■□□□□ 0.62
CLN6-215ENST00000636674 ADGRF5Q8IZF2 1346 aa18.92■□□□□ 0.62
CLN6-215ENST00000636674 APAF1O14727 1248 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms