RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 MSH6P52701 1360 aa24.6■■□□□ 1.53
CACNA1A-229ENST00000636670 TMEM2Q9UHN6 1383 aa24.6■■□□□ 1.53
CACNA1A-229ENST00000636670 CFAP65Q6ZU64 1925 aaKnown RBP24.6■■□□□ 1.53
CACNA1A-229ENST00000636670 LRP6O75581 1613 aa24.57■■□□□ 1.52
CACNA1A-229ENST00000636670 LMTK2Q8IWU2 1503 aa24.57■■□□□ 1.52
CACNA1A-229ENST00000636670 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
CACNA1A-229ENST00000636670 ITGAEP38570 1179 aa24.55■■□□□ 1.52
CACNA1A-229ENST00000636670 SLC26A8Q96RN1 970 aa24.55■■□□□ 1.52
CACNA1A-229ENST00000636670 STAG3Q9UJ98 1225 aa24.55■■□□□ 1.52
CACNA1A-229ENST00000636670 TET3O43151 1660 aa24.54■■□□□ 1.52
CACNA1A-229ENST00000636670 NKTRP30414 1462 aaKnown RBP24.54■■□□□ 1.52
CACNA1A-229ENST00000636670 CDK12Q9NYV4 1490 aaPredicted RBP24.54■■□□□ 1.52
CACNA1A-229ENST00000636670 COL16A1Q07092 1604 aaPredicted RBP24.53■■□□□ 1.52
CACNA1A-229ENST00000636670 EFCAB6Q5THR3 1501 aa24.53■■□□□ 1.52
CACNA1A-229ENST00000636670 KANK1Q14678 1352 aa24.53■■□□□ 1.52
CACNA1A-229ENST00000636670 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
CACNA1A-229ENST00000636670 HFM1A2PYH4 1435 aa24.52■■□□□ 1.52
CACNA1A-229ENST00000636670 SRCAPQ6ZRS2 3230 aa24.51■■□□□ 1.51
CACNA1A-229ENST00000636670 NAIPQ13075 1403 aa24.5■■□□□ 1.51
CACNA1A-229ENST00000636670 PIK3C2BO00750 1634 aa24.49■■□□□ 1.51
CACNA1A-229ENST00000636670 NWD1Q149M9 1564 aa24.48■■□□□ 1.51
CACNA1A-229ENST00000636670 KDM5AP29375 1690 aaKnown RBP24.43■■□□□ 1.5
CACNA1A-229ENST00000636670 IDI1Q13907 227 aa24.42■■□□□ 1.5
CACNA1A-229ENST00000636670 E9PCH4 1651 aa24.42■■□□□ 1.5
CACNA1A-229ENST00000636670 SHPRHQ149N8 1683 aa24.42■■□□□ 1.5
CACNA1A-229ENST00000636670 RPRD2Q5VT52 1461 aaKnown RBP24.41■■□□□ 1.5
CACNA1A-229ENST00000636670 BCANQ96GW7 911 aa24.41■■□□□ 1.5
CACNA1A-229ENST00000636670 FOXD1Q16676 465 aa24.4■■□□□ 1.5
CACNA1A-229ENST00000636670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.5
CACNA1A-229ENST00000636670 NCOA3Q9Y6Q9 1424 aa24.39■■□□□ 1.5
CACNA1A-229ENST00000636670 AHDC1Q5TGY3 1603 aaPredicted RBP24.38■■□□□ 1.49
CACNA1A-229ENST00000636670 AFF2P51816 1311 aa24.37■■□□□ 1.49
CACNA1A-229ENST00000636670 NUTM2BA6NNL0 878 aaPredicted RBP24.37■■□□□ 1.49
CACNA1A-229ENST00000636670 NUTM2EB1AL46 878 aaPredicted RBP24.37■■□□□ 1.49
CACNA1A-229ENST00000636670 NUTM2AQ8IVF1 878 aaPredicted RBP24.37■■□□□ 1.49
CACNA1A-229ENST00000636670 CADPS2Q86UW7 1296 aa24.36■■□□□ 1.49
CACNA1A-229ENST00000636670 RBM6P78332 1123 aaKnown RBP24.35■■□□□ 1.49
CACNA1A-229ENST00000636670 C14orf37Q86TY3 774 aa24.34■■□□□ 1.49
CACNA1A-229ENST00000636670 ZRANB1Q9UGI0 708 aa24.34■■□□□ 1.49
CACNA1A-229ENST00000636670 SPHKAPQ2M3C7 1700 aa24.34■■□□□ 1.49
CACNA1A-229ENST00000636670 RGS12O14924 1447 aa24.34■■□□□ 1.49
CACNA1A-229ENST00000636670 NUTM2DQ5VT03 806 aaPredicted RBP24.33■■□□□ 1.49
CACNA1A-229ENST00000636670 QTRT2Q9H974 415 aaKnown RBP24.32■■□□□ 1.48
CACNA1A-229ENST00000636670 CHD2O14647 1828 aaKnown RBP24.32■■□□□ 1.48
CACNA1A-229ENST00000636670 NUP155O75694 1391 aa24.31■■□□□ 1.48
CACNA1A-229ENST00000636670 ATF3P18847 181 aa24.31■■□□□ 1.48
CACNA1A-229ENST00000636670 NOS1P29475 1434 aa24.31■■□□□ 1.48
CACNA1A-229ENST00000636670 C19orf44Q9H6X5 657 aa24.31■■□□□ 1.48
CACNA1A-229ENST00000636670 DIP2AQ14689 1571 aa24.28■■□□□ 1.48
CACNA1A-229ENST00000636670 SLC52A1Q9NWF4 448 aa24.27■■□□□ 1.48
CACNA1A-229ENST00000636670 ADGRB3O60242 1522 aa24.26■■□□□ 1.47
CACNA1A-229ENST00000636670 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
CACNA1A-229ENST00000636670 TBX22Q9Y458 520 aa24.26■■□□□ 1.47
CACNA1A-229ENST00000636670 ATAD2Q6PL18 1390 aa24.26■■□□□ 1.47
CACNA1A-229ENST00000636670 PLEKHG1Q9ULL1 1385 aa24.26■■□□□ 1.47
CACNA1A-229ENST00000636670 BRINP3Q76B58 766 aa24.25■■□□□ 1.47
CACNA1A-229ENST00000636670 NGLY1Q96IV0 654 aa24.25■■□□□ 1.47
CACNA1A-229ENST00000636670 SETD5Q9C0A6 1442 aa24.25■■□□□ 1.47
CACNA1A-229ENST00000636670 C8orf37Q96NL8 207 aa24.24■■□□□ 1.47
CACNA1A-229ENST00000636670 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.24■■□□□ 1.47
CACNA1A-229ENST00000636670 MYO5BQ9ULV0 1848 aa24.23■■□□□ 1.47
CACNA1A-229ENST00000636670 PPP1R15AO75807 674 aaPredicted RBP24.22■■□□□ 1.47
CACNA1A-229ENST00000636670 LRRC59Q96AG4 307 aaKnown RBP24.21■■□□□ 1.47
CACNA1A-229ENST00000636670 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
CACNA1A-229ENST00000636670 TRPM2O94759 1503 aa24.2■■□□□ 1.46
CACNA1A-229ENST00000636670 ZFYVE9O95405 1425 aa24.19■■□□□ 1.46
CACNA1A-229ENST00000636670 SETBP1Q9Y6X0 1596 aa24.19■■□□□ 1.46
CACNA1A-229ENST00000636670 TMEM131LA2VDJ0 1609 aa24.16■■□□□ 1.46
CACNA1A-229ENST00000636670 RAB3GAP2Q9H2M9 1393 aa24.16■■□□□ 1.46
CACNA1A-229ENST00000636670 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
CACNA1A-229ENST00000636670 PIK3R4Q99570 1358 aa24.15■■□□□ 1.46
CACNA1A-229ENST00000636670 CCDC125Q86Z20 511 aa24.14■■□□□ 1.45
CACNA1A-229ENST00000636670 KIF1BO60333 1816 aa24.14■■□□□ 1.45
CACNA1A-229ENST00000636670 CLTCL1P53675 1640 aa24.13■■□□□ 1.45
CACNA1A-229ENST00000636670 ASXL1Q8IXJ9 1541 aa24.12■■□□□ 1.45
CACNA1A-229ENST00000636670 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.12■■□□□ 1.45
CACNA1A-229ENST00000636670 DCCP43146 1447 aa24.1■■□□□ 1.45
CACNA1A-229ENST00000636670 ADAMTS13Q76LX8 1427 aa24.1■■□□□ 1.45
CACNA1A-229ENST00000636670 PNPLA6Q8IY17 1366 aa24.09■■□□□ 1.45
CACNA1A-229ENST00000636670 TRPC5Q9UL62 973 aaPredicted RBP24.08■■□□□ 1.45
CACNA1A-229ENST00000636670 NHSL1Q5SYE7 1610 aa24.07■■□□□ 1.44
CACNA1A-229ENST00000636670 USP21Q9UK80 565 aa24.07■■□□□ 1.44
CACNA1A-229ENST00000636670 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
CACNA1A-229ENST00000636670 ADAMTS2O95450 1211 aa24.06■■□□□ 1.44
CACNA1A-229ENST00000636670 SLC4A1APQ9BWU0 796 aaKnown RBP24.06■■□□□ 1.44
CACNA1A-229ENST00000636670 MST1RQ04912 1400 aa24.04■■□□□ 1.44
CACNA1A-229ENST00000636670 HRCP23327 699 aa24.02■■□□□ 1.44
CACNA1A-229ENST00000636670 FNBP4Q8N3X1 1017 aaPredicted RBP24■■□□□ 1.43
CACNA1A-229ENST00000636670 DDX17Q92841 729 aaKnown RBP24■■□□□ 1.43
CACNA1A-229ENST00000636670 CHGAP10645 457 aaKnown RBP23.98■■□□□ 1.43
CACNA1A-229ENST00000636670 MPHOSPH9Q99550 1183 aa23.98■■□□□ 1.43
CACNA1A-229ENST00000636670 PTPRUQ92729 1446 aa23.98■■□□□ 1.43
CACNA1A-229ENST00000636670 ATRNO75882 1429 aa23.95■■□□□ 1.42
CACNA1A-229ENST00000636670 PPLO60437 1756 aa23.94■■□□□ 1.42
CACNA1A-229ENST00000636670 IFT172Q9UG01 1749 aa23.94■■□□□ 1.42
CACNA1A-229ENST00000636670 EP400Q96L91 3159 aa23.94■■□□□ 1.42
CACNA1A-229ENST00000636670 PTCH1Q13635 1447 aa23.93■■□□□ 1.42
CACNA1A-229ENST00000636670 TRIM26Q12899 539 aaPredicted RBP23.93■■□□□ 1.42
CACNA1A-229ENST00000636670 NEXMIFQ5QGS0 1516 aa23.93■■□□□ 1.42
CACNA1A-229ENST00000636670 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms