RNA–Protein interactions for RNA: ENST00000636616.1

EFHC1-223, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 1,636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-223ENST00000636616 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
EFHC1-223ENST00000636616 VPS9D1Q9Y2B5 631 aa8.56□□□□□ -1.04
EFHC1-223ENST00000636616 LSM11P83369 360 aaKnown RBP eCLIP8.55□□□□□ -1.04
EFHC1-223ENST00000636616 TK2O00142 265 aa8.54□□□□□ -1.04
EFHC1-223ENST00000636616 SMAPO00193 183 aa8.54□□□□□ -1.04
EFHC1-223ENST00000636616 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
EFHC1-223ENST00000636616 Q6ZNB5 142 aa8.52□□□□□ -1.05
EFHC1-223ENST00000636616 PARP9Q8IXQ6 854 aa8.52□□□□□ -1.05
EFHC1-223ENST00000636616 NLRP7Q8WX94 980 aa8.52□□□□□ -1.05
EFHC1-223ENST00000636616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
EFHC1-223ENST00000636616 RCCD1A6NED2 376 aa8.51□□□□□ -1.05
EFHC1-223ENST00000636616 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
EFHC1-223ENST00000636616 ADGRD1Q6QNK2 874 aa8.51□□□□□ -1.05
EFHC1-223ENST00000636616 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
EFHC1-223ENST00000636616 C1orf115Q9H7X2 142 aa8.51□□□□□ -1.05
EFHC1-223ENST00000636616 BHMG1C9JSJ3 638 aaPredicted RBP8.51□□□□□ -1.05
EFHC1-223ENST00000636616 TTLL12Q14166 644 aaPredicted RBP8.51□□□□□ -1.05
EFHC1-223ENST00000636616 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
EFHC1-223ENST00000636616 KDM4CQ9H3R0 1056 aa8.51□□□□□ -1.05
EFHC1-223ENST00000636616 CLCN1P35523 988 aa8.5□□□□□ -1.05
EFHC1-223ENST00000636616 ARID3AQ99856 593 aa8.5□□□□□ -1.05
EFHC1-223ENST00000636616 SEPT9Q9UHD8 586 aaPredicted RBP8.5□□□□□ -1.05
EFHC1-223ENST00000636616 DNAJB2P25686 324 aa8.49□□□□□ -1.05
EFHC1-223ENST00000636616 GPCPD1Q9NPB8 672 aa8.49□□□□□ -1.05
EFHC1-223ENST00000636616 HRO43593 1189 aa8.48□□□□□ -1.05
EFHC1-223ENST00000636616 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
EFHC1-223ENST00000636616 NBPF3Q9H094 633 aa8.48□□□□□ -1.05
EFHC1-223ENST00000636616 LAPTM4BQ86VI4 370 aa8.47□□□□□ -1.05
EFHC1-223ENST00000636616 FAM98CQ17RN3 349 aaKnown RBP8.47□□□□□ -1.05
EFHC1-223ENST00000636616 TMEM134Q9H6X4 195 aa8.47□□□□□ -1.05
EFHC1-223ENST00000636616 MRPL50Q8N5N7 158 aaKnown RBP8.46□□□□□ -1.06
EFHC1-223ENST00000636616 SSTR3P32745 418 aaPredicted RBP8.44□□□□□ -1.06
EFHC1-223ENST00000636616 FAM217BQ9NTX9 383 aaPredicted RBP8.44□□□□□ -1.06
EFHC1-223ENST00000636616 MS4A1P11836 297 aa8.43□□□□□ -1.06
EFHC1-223ENST00000636616 SWT1Q5T5J6 900 aaKnown RBP8.43□□□□□ -1.06
EFHC1-223ENST00000636616 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
EFHC1-223ENST00000636616 ZFRQ96KR1 1074 aaKnown RBP8.43□□□□□ -1.06
EFHC1-223ENST00000636616 FAM117AQ9C073 453 aa8.43□□□□□ -1.06
EFHC1-223ENST00000636616 HDGFP51858 240 aaKnown RBP8.42□□□□□ -1.06
EFHC1-223ENST00000636616 SAMD7Q7Z3H4 446 aa8.41□□□□□ -1.06
EFHC1-223ENST00000636616 IL27Q8NEV9 243 aa8.41□□□□□ -1.06
EFHC1-223ENST00000636616 SULF1Q8IWU6 871 aa8.4□□□□□ -1.06
EFHC1-223ENST00000636616 DDRGK1Q96HY6 314 aa8.4□□□□□ -1.06
EFHC1-223ENST00000636616 DDX11L8A8MPP1 907 aa8.4□□□□□ -1.07
EFHC1-223ENST00000636616 CCDC9Q9Y3X0 531 aaKnown RBP8.4□□□□□ -1.07
EFHC1-223ENST00000636616 GOLGA8CPA6NN73 597 aa8.39□□□□□ -1.07
EFHC1-223ENST00000636616 PLEKHG3A1L390 1219 aa8.38□□□□□ -1.07
EFHC1-223ENST00000636616 ARID3CA6NKF2 412 aa8.38□□□□□ -1.07
EFHC1-223ENST00000636616 CD46P15529 392 aa8.38□□□□□ -1.07
EFHC1-223ENST00000636616 IFFO2Q5TF58 517 aa8.38□□□□□ -1.07
EFHC1-223ENST00000636616 BEGAINQ9BUH8 593 aa8.38□□□□□ -1.07
EFHC1-223ENST00000636616 SLF2Q8IX21 1173 aa8.37□□□□□ -1.07
EFHC1-223ENST00000636616 NECTIN2Q92692 538 aa8.37□□□□□ -1.07
EFHC1-223ENST00000636616 LOC100996750A0A140TA64 210 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 ZBTB7CA1YPR0 619 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 SLC10A3P09131 477 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 SLC4A3P48751 1232 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 RDH13Q8NBN7 331 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 LRCH3Q96II8 777 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 KRTAP4-6Q9BYQ5 205 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 PDIA4P13667 645 aaKnown RBP8.36□□□□□ -1.07
EFHC1-223ENST00000636616 RSPH4AQ5TD94 716 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 ANKK1Q8NFD2 765 aa8.36□□□□□ -1.07
EFHC1-223ENST00000636616 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.36□□□□□ -1.07
EFHC1-223ENST00000636616 APBB1O00213 710 aa8.35□□□□□ -1.07
EFHC1-223ENST00000636616 WNT2BQ93097 391 aa8.35□□□□□ -1.07
EFHC1-223ENST00000636616 RNF40O75150 1001 aa8.34□□□□□ -1.07
EFHC1-223ENST00000636616 SOWAHBA6NEL2 793 aa8.33□□□□□ -1.08
EFHC1-223ENST00000636616 GCGRP47871 477 aa8.32□□□□□ -1.08
EFHC1-223ENST00000636616 BCAMP50895 628 aa8.32□□□□□ -1.08
EFHC1-223ENST00000636616 A0A0G2JS52 829 aa8.31□□□□□ -1.08
EFHC1-223ENST00000636616 SPIRE2Q8WWL2 714 aa8.31□□□□□ -1.08
EFHC1-223ENST00000636616 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
EFHC1-223ENST00000636616 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
EFHC1-223ENST00000636616 KCTD12Q96CX2 325 aaKnown RBP8.3□□□□□ -1.08
EFHC1-223ENST00000636616 HPS5Q9UPZ3 1129 aa8.3□□□□□ -1.08
EFHC1-223ENST00000636616 CFHP08603 1231 aa8.29□□□□□ -1.08
EFHC1-223ENST00000636616 PPP4CP60510 307 aa8.29□□□□□ -1.08
EFHC1-223ENST00000636616 DIXDC1Q155Q3 683 aa8.29□□□□□ -1.08
EFHC1-223ENST00000636616 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
EFHC1-223ENST00000636616 THSD4Q6ZMP0 1018 aa8.29□□□□□ -1.08
EFHC1-223ENST00000636616 TSR3Q9UJK0 312 aaKnown RBP8.29□□□□□ -1.08
EFHC1-223ENST00000636616 KDM4AO75164 1064 aa8.29□□□□□ -1.08
EFHC1-223ENST00000636616 GOPCQ9HD26 462 aa8.29□□□□□ -1.08
EFHC1-223ENST00000636616 LAPTM4AQ15012 233 aa8.28□□□□□ -1.08
EFHC1-223ENST00000636616 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
EFHC1-223ENST00000636616 SKIV2LQ15477 1246 aaKnown RBP8.27□□□□□ -1.09
EFHC1-223ENST00000636616 KMT5BQ4FZB7 885 aa8.27□□□□□ -1.09
EFHC1-223ENST00000636616 USP46P62068 366 aa8.26□□□□□ -1.09
EFHC1-223ENST00000636616 WBP1LQ9NX94 342 aa8.26□□□□□ -1.09
EFHC1-223ENST00000636616 POLR3EQ9NVU0 708 aa8.25□□□□□ -1.09
EFHC1-223ENST00000636616 MOXD2PA6NHM9 499 aa8.25□□□□□ -1.09
EFHC1-223ENST00000636616 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
EFHC1-223ENST00000636616 FUT2Q10981 343 aa8.25□□□□□ -1.09
EFHC1-223ENST00000636616 TRAF7Q6Q0C0 670 aa8.25□□□□□ -1.09
EFHC1-223ENST00000636616 PCMTD1Q96MG8 357 aaPredicted RBP8.25□□□□□ -1.09
EFHC1-223ENST00000636616 PRR14Q9BWN1 585 aa8.25□□□□□ -1.09
EFHC1-223ENST00000636616 HOXA2O43364 376 aa8.24□□□□□ -1.09
EFHC1-223ENST00000636616 NDUFV2P19404 249 aa8.24□□□□□ -1.09
EFHC1-223ENST00000636616 CLK2P49760 499 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms