RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
GABRB3-219ENST00000636466 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
GABRB3-219ENST00000636466 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
GABRB3-219ENST00000636466 C9orf84Q5VXU9 1444 aa17.71■□□□□ 0.43
GABRB3-219ENST00000636466 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
GABRB3-219ENST00000636466 L1TD1Q5T7N2 865 aaKnown RBP17.71■□□□□ 0.43
GABRB3-219ENST00000636466 TIAM1Q13009 1591 aa17.71■□□□□ 0.43
GABRB3-219ENST00000636466 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.42
GABRB3-219ENST00000636466 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
GABRB3-219ENST00000636466 NAIPQ13075 1403 aa17.7■□□□□ 0.42
GABRB3-219ENST00000636466 TEFQ10587 303 aa17.7■□□□□ 0.42
GABRB3-219ENST00000636466 DZIP1LQ8IYY4 767 aaKnown RBP17.7■□□□□ 0.42
GABRB3-219ENST00000636466 DRC7Q8IY82 874 aa17.69■□□□□ 0.42
GABRB3-219ENST00000636466 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
GABRB3-219ENST00000636466 LNPKQ9C0E8 428 aa17.69■□□□□ 0.42
GABRB3-219ENST00000636466 MSNP26038 577 aaKnown RBP17.68■□□□□ 0.42
GABRB3-219ENST00000636466 TCP11L2Q8N4U5 519 aa17.68■□□□□ 0.42
GABRB3-219ENST00000636466 RUNDC1Q96C34 613 aa17.68■□□□□ 0.42
GABRB3-219ENST00000636466 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
GABRB3-219ENST00000636466 ARID3AQ99856 593 aa17.68■□□□□ 0.42
GABRB3-219ENST00000636466 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
GABRB3-219ENST00000636466 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
GABRB3-219ENST00000636466 PRAM1Q96QH2 718 aa17.66■□□□□ 0.42
GABRB3-219ENST00000636466 IFT140Q96RY7 1462 aa17.66■□□□□ 0.42
GABRB3-219ENST00000636466 KIAA1107Q9UPP5 1409 aa17.66■□□□□ 0.42
GABRB3-219ENST00000636466 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.65■□□□□ 0.42
GABRB3-219ENST00000636466 TXNDC2Q86VQ3 553 aa17.64■□□□□ 0.42
GABRB3-219ENST00000636466 PLB1Q6P1J6 1458 aa17.64■□□□□ 0.42
GABRB3-219ENST00000636466 PNISRQ8TF01 805 aaKnown RBP17.64■□□□□ 0.41
GABRB3-219ENST00000636466 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
GABRB3-219ENST00000636466 DAPK1P53355 1430 aa17.63■□□□□ 0.41
GABRB3-219ENST00000636466 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
GABRB3-219ENST00000636466 EPRSP07814 1512 aaKnown RBP17.63■□□□□ 0.41
GABRB3-219ENST00000636466 EFCAB5A4FU69 1503 aa17.62■□□□□ 0.41
GABRB3-219ENST00000636466 HSP90B1P14625 803 aaKnown RBP17.62■□□□□ 0.41
GABRB3-219ENST00000636466 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
GABRB3-219ENST00000636466 GOLGA6L3A6NEY3 463 aa17.62■□□□□ 0.41
GABRB3-219ENST00000636466 PSME1Q06323 249 aa17.62■□□□□ 0.41
GABRB3-219ENST00000636466 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
GABRB3-219ENST00000636466 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
GABRB3-219ENST00000636466 GPATCH3Q96I76 525 aa17.6■□□□□ 0.41
GABRB3-219ENST00000636466 CHMP4AQ9BY43 222 aa17.6■□□□□ 0.41
GABRB3-219ENST00000636466 AKNAQ7Z591 1439 aa17.6■□□□□ 0.41
GABRB3-219ENST00000636466 BCAR3O75815 825 aa17.6■□□□□ 0.41
GABRB3-219ENST00000636466 TOMM22Q9NS69 142 aa17.6■□□□□ 0.41
GABRB3-219ENST00000636466 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
GABRB3-219ENST00000636466 TSR2Q969E8 191 aaKnown RBP17.6■□□□□ 0.41
GABRB3-219ENST00000636466 NLRP6P59044 892 aa17.6■□□□□ 0.41
GABRB3-219ENST00000636466 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
GABRB3-219ENST00000636466 ST18O60284 1047 aa17.59■□□□□ 0.41
GABRB3-219ENST00000636466 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
GABRB3-219ENST00000636466 C9orf78Q9NZ63 289 aaPredicted RBP17.59■□□□□ 0.41
GABRB3-219ENST00000636466 EHBP1L1Q8N3D4 1523 aa17.59■□□□□ 0.41
GABRB3-219ENST00000636466 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
GABRB3-219ENST00000636466 CABP1Q9NZU7 370 aa17.59■□□□□ 0.41
GABRB3-219ENST00000636466 BRD4O60885 1362 aaPredicted RBP17.58■□□□□ 0.41
GABRB3-219ENST00000636466 GTF2E1P29083 439 aaPredicted RBP17.58■□□□□ 0.4
GABRB3-219ENST00000636466 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
GABRB3-219ENST00000636466 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
GABRB3-219ENST00000636466 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
GABRB3-219ENST00000636466 STAC3Q96MF2 364 aa17.57■□□□□ 0.4
GABRB3-219ENST00000636466 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
GABRB3-219ENST00000636466 NRDCO43847 1150 aa17.56■□□□□ 0.4
GABRB3-219ENST00000636466 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
GABRB3-219ENST00000636466 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
GABRB3-219ENST00000636466 ZNF608Q9ULD9 1512 aaPredicted RBP17.56■□□□□ 0.4
GABRB3-219ENST00000636466 DDX49Q9Y6V7 483 aaKnown RBP17.55■□□□□ 0.4
GABRB3-219ENST00000636466 GOLGA6L6A8MZA4 724 aa17.55■□□□□ 0.4
GABRB3-219ENST00000636466 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
GABRB3-219ENST00000636466 API5Q9BZZ5 524 aaKnown RBP17.55■□□□□ 0.4
GABRB3-219ENST00000636466 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
GABRB3-219ENST00000636466 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
GABRB3-219ENST00000636466 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
GABRB3-219ENST00000636466 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
GABRB3-219ENST00000636466 EVA1CP58658 441 aa17.53■□□□□ 0.4
GABRB3-219ENST00000636466 ANO2Q9NQ90 1003 aa17.53■□□□□ 0.4
GABRB3-219ENST00000636466 GNAI1P63096 354 aa17.53■□□□□ 0.4
GABRB3-219ENST00000636466 CHAF1AQ13111 956 aaPredicted RBP17.52■□□□□ 0.39
GABRB3-219ENST00000636466 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.52■□□□□ 0.39
GABRB3-219ENST00000636466 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
GABRB3-219ENST00000636466 KIF16BQ96L93 1317 aa17.51■□□□□ 0.39
GABRB3-219ENST00000636466 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
GABRB3-219ENST00000636466 ABCC5O15440 1437 aa17.51■□□□□ 0.39
GABRB3-219ENST00000636466 ANKRD30BQ9BXX2 1392 aa17.51■□□□□ 0.39
GABRB3-219ENST00000636466 SKAP1Q86WV1 359 aa17.51■□□□□ 0.39
GABRB3-219ENST00000636466 DIAPH3Q9NSV4 1193 aa17.5■□□□□ 0.39
GABRB3-219ENST00000636466 NLRP2Q9NX02 1062 aa17.5■□□□□ 0.39
GABRB3-219ENST00000636466 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
GABRB3-219ENST00000636466 NEXNQ0ZGT2 675 aa17.5■□□□□ 0.39
GABRB3-219ENST00000636466 GSE1Q14687 1217 aa17.5■□□□□ 0.39
GABRB3-219ENST00000636466 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
GABRB3-219ENST00000636466 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
GABRB3-219ENST00000636466 SYAP1Q96A49 352 aaPredicted RBP17.49■□□□□ 0.39
GABRB3-219ENST00000636466 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
GABRB3-219ENST00000636466 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.48■□□□□ 0.39
GABRB3-219ENST00000636466 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
GABRB3-219ENST00000636466 WAPLQ7Z5K2 1190 aa17.47■□□□□ 0.39
GABRB3-219ENST00000636466 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
GABRB3-219ENST00000636466 SULT6B1Q6IMI4 303 aa17.46■□□□□ 0.39
GABRB3-219ENST00000636466 HECW1Q76N89 1606 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms