RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-222	ENST00000636048	BCAR3	O75815	825 aa		11.26	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	GNL2	Q13823	731 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	ANKRD45	Q5TZF3	282 aa		11.26	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	PODXL2	Q9NZ53	605 aa		11.26	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	NOL8	Q76FK4	1167 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	PDZRN3	Q9UPQ7	1066 aa		11.25	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	STK26	Q9P289	416 aa		11.25	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	DZIP1L	Q8IYY4	767 aa	Known RBP	11.24	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	MCTP1	Q6DN14	999 aa		11.24	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	CADPS	Q9ULU8	1353 aa		11.24	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	PHF14	O94880	888 aa		11.24	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	CCDC173	Q0VFZ6	552 aa		11.24	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	GTF2E1	P29083	439 aa	Predicted RBP	11.24	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	NGEF	Q8N5V2	710 aa		11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	FGD5	Q6ZNL6	1462 aa		11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	DCAF8L1	A6NGE4	600 aa		11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	TAF7L	Q5H9L4	462 aa		11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	GORAB	Q5T7V8	394 aa		11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	MTERF4	Q7Z6M4	381 aa	Known RBP	11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	DDX19B	Q9UMR2	479 aa		11.23	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	PDE3A	Q14432	1141 aa		11.22	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	LNPK	Q9C0E8	428 aa		11.22	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	AAMP	Q13685	434 aa		11.22	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	SPAG9	O60271	1321 aa	Known RBP	11.21	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	PPP2R1A	P30153	589 aa		11.21	□□□□□ -0.61
ARHGEF9-222	ENST00000636048	CAVIN1	Q6NZI2	390 aa	Known RBP	11.21	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.2	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	CCDC34	Q96HJ3	373 aa		11.2	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	NUCB2	P80303	420 aa		11.2	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	NGDN	Q8NEJ9	315 aa	Known RBP	11.2	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	STK31	Q9BXU1	1019 aa		11.19	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	MAP3K1	Q13233	1512 aa		11.19	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	RNF214	Q8ND24	703 aa		11.19	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	TNNT3	P45378	269 aa	Predicted RBP	11.18	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	PRM3	Q9NNZ6	103 aa		11.18	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	CCDC39	Q9UFE4	941 aa		11.18	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	PDS5B	Q9NTI5	1447 aa		11.18	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	CLCN1	P35523	988 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	NBPF1	Q3BBV0	1214 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	TBC1D2	Q9BYX2	928 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	HTATSF1	O43719	755 aa	Known RBP	11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	PCF11	O94913	1555 aa	Known RBP	11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	UQCRHL	A0A096LP55	91 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	UQCRH	P07919	91 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	XRCC6	P12956	609 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	ZSCAN30	Q86W11	494 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	RUNDC1	Q96C34	613 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	PDCL3	Q9H2J4	239 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	TERF2IP	Q9NYB0	399 aa		11.17	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	TRIM6-TRIM34	B2RNG4	842 aa		11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	PANK2	Q9BZ23	570 aa		11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	ANKRD50	Q9ULJ7	1429 aa		11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	GPATCH3	Q96I76	525 aa		11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	KIF16B	Q96L93	1317 aa		11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	ELL2	O00472	640 aa	Predicted RBP	11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	CHMP3	Q9Y3E7	222 aa		11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	ANKRD30B	Q9BXX2	1392 aa		11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	KIAA1107	Q9UPP5	1409 aa		11.16	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	RAD54L2	Q9Y4B4	1467 aa		11.15	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	C8orf34	Q49A92	452 aa		11.15	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	SLFN5	Q08AF3	891 aa		11.15	□□□□□ -0.62
ARHGEF9-222	ENST00000636048	EFCAB5	A4FU69	1503 aa		11.14	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	KRI1	Q8N9T8	703 aa	Known RBP	11.14	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	PTPN23	Q9H3S7	1636 aa		11.14	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	EHBP1L1	Q8N3D4	1523 aa		11.14	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	PRPF40A	O75400	957 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	AMPH	P49418	695 aa		11.13	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	MEX3C	Q5U5Q3	659 aa	Known RBP	11.13	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	HMMR	O75330	724 aa		11.13	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	TCP11L2	Q8N4U5	519 aa		11.13	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	KIF3B	O15066	747 aa		11.13	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	REC8	O95072	547 aa		11.13	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.12	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	EVA1C	P58658	441 aa		11.12	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	TRAK1	Q9UPV9	953 aa		11.12	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	NINL	Q9Y2I6	1382 aa		11.12	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	LMOD3	Q0VAK6	560 aa		11.12	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	RSPH4A	Q5TD94	716 aa		11.12	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	FANCD2	Q9BXW9	1451 aa		11.11	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	DUSP27	Q5VZP5	1158 aa		11.11	□□□□□ -0.63
ARHGEF9-222	ENST00000636048		K7ELQ4	463 aa	Predicted RBP	11.11	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	CDC45	O75419	566 aa		11.11	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	ZNF592	Q92610	1267 aa		11.11	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	HMGN5	P82970	282 aa	Known RBP	11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	RNF123	Q5XPI4	1314 aa		11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	MPND	Q8N594	471 aa		11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	PRDM10	Q9NQV6	1147 aa		11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	RPRD2	Q5VT52	1461 aa	Known RBP	11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	SLC4A10	Q6U841	1118 aa		11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	DIAPH3	Q9NSV4	1193 aa		11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	IGHD	P01880	384 aa		11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	INTS3	Q68E01	1043 aa	Known RBP	11.1	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	MARCH6	O60337	910 aa		11.09	□□□□□ -0.63
ARHGEF9-222	ENST00000636048	RASSF8	Q8NHQ8	419 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms