RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 NUP155O75694 1391 aa16.8■□□□□ 0.28
UBE3A-224ENST00000635914 C9orf78Q9NZ63 289 aaPredicted RBP16.79■□□□□ 0.28
UBE3A-224ENST00000635914 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
UBE3A-224ENST00000635914 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
UBE3A-224ENST00000635914 DHX16O60231 1041 aaKnown RBP16.79■□□□□ 0.28
UBE3A-224ENST00000635914 AEBP2Q6ZN18 517 aaPredicted RBP16.79■□□□□ 0.28
UBE3A-224ENST00000635914 NAP1L1P55209 391 aaKnown RBP16.79■□□□□ 0.28
UBE3A-224ENST00000635914 ERCC4Q92889 916 aaPredicted RBP16.79■□□□□ 0.28
UBE3A-224ENST00000635914 RAD21O60216 631 aa16.79■□□□□ 0.28
UBE3A-224ENST00000635914 CAGE1Q8TC20 777 aa16.79■□□□□ 0.28
UBE3A-224ENST00000635914 IPO9Q96P70 1041 aaKnown RBP16.78■□□□□ 0.28
UBE3A-224ENST00000635914 TXLNBQ8N3L3 684 aa16.78■□□□□ 0.28
UBE3A-224ENST00000635914 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
UBE3A-224ENST00000635914 NINLQ9Y2I6 1382 aa16.77■□□□□ 0.28
UBE3A-224ENST00000635914 CCP110O43303 1012 aa16.77■□□□□ 0.28
UBE3A-224ENST00000635914 APPP05067 770 aa16.77■□□□□ 0.27
UBE3A-224ENST00000635914 MSH5O43196 834 aa16.76■□□□□ 0.27
UBE3A-224ENST00000635914 DHX8Q14562 1220 aaKnown RBP16.76■□□□□ 0.27
UBE3A-224ENST00000635914 KIF7Q2M1P5 1343 aa16.76■□□□□ 0.27
UBE3A-224ENST00000635914 EFCAB2Q5VUJ9 269 aa16.76■□□□□ 0.27
UBE3A-224ENST00000635914 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
UBE3A-224ENST00000635914 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
UBE3A-224ENST00000635914 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
UBE3A-224ENST00000635914 NFXL1Q6ZNB6 911 aa16.75■□□□□ 0.27
UBE3A-224ENST00000635914 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
UBE3A-224ENST00000635914 PKD2Q13563 968 aa16.75■□□□□ 0.27
UBE3A-224ENST00000635914 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
UBE3A-224ENST00000635914 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
UBE3A-224ENST00000635914 OLFM4Q6UX06 510 aa16.75■□□□□ 0.27
UBE3A-224ENST00000635914 MTERF4Q7Z6M4 381 aaKnown RBP16.75■□□□□ 0.27
UBE3A-224ENST00000635914 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
UBE3A-224ENST00000635914 OFD1O75665 1012 aa16.74■□□□□ 0.27
UBE3A-224ENST00000635914 RBM33Q96EV2 1170 aaKnown RBP16.74■□□□□ 0.27
UBE3A-224ENST00000635914 ERLIN2O94905 339 aa16.74■□□□□ 0.27
UBE3A-224ENST00000635914 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
UBE3A-224ENST00000635914 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
UBE3A-224ENST00000635914 TEFQ10587 303 aa16.73■□□□□ 0.27
UBE3A-224ENST00000635914 FOXD1Q16676 465 aa16.73■□□□□ 0.27
UBE3A-224ENST00000635914 LUC7LQ9NQ29 371 aaKnown RBP16.73■□□□□ 0.27
UBE3A-224ENST00000635914 CUX1P39880 1505 aa16.73■□□□□ 0.27
UBE3A-224ENST00000635914 SLC3A2P08195 630 aaKnown RBP16.73■□□□□ 0.27
UBE3A-224ENST00000635914 COG3Q96JB2 828 aa16.73■□□□□ 0.27
UBE3A-224ENST00000635914 NGEFQ8N5V2 710 aa16.72■□□□□ 0.27
UBE3A-224ENST00000635914 PAF1Q8N7H5 531 aa16.72■□□□□ 0.27
UBE3A-224ENST00000635914 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
UBE3A-224ENST00000635914 DDX49Q9Y6V7 483 aaKnown RBP16.72■□□□□ 0.27
UBE3A-224ENST00000635914 WASHC2CQ9Y4E1 1318 aa16.72■□□□□ 0.27
UBE3A-224ENST00000635914 ERC2O15083 957 aa16.72■□□□□ 0.27
UBE3A-224ENST00000635914 DESP17661 470 aa16.72■□□□□ 0.27
UBE3A-224ENST00000635914 SASS6Q6UVJ0 657 aa16.72■□□□□ 0.27
UBE3A-224ENST00000635914 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
UBE3A-224ENST00000635914 ZNF592Q92610 1267 aa16.71■□□□□ 0.27
UBE3A-224ENST00000635914 SYCP1Q15431 976 aa16.71■□□□□ 0.27
UBE3A-224ENST00000635914 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.26
UBE3A-224ENST00000635914 ZFYVE27Q5T4F4 411 aa16.7■□□□□ 0.26
UBE3A-224ENST00000635914 SART3Q15020 963 aaKnown RBP16.7■□□□□ 0.26
UBE3A-224ENST00000635914 RBM19Q9Y4C8 960 aaKnown RBP16.7■□□□□ 0.26
UBE3A-224ENST00000635914 GOLGA6L7A0A1B0GV03 622 aa16.7■□□□□ 0.26
UBE3A-224ENST00000635914 PIP4K2AP48426 406 aaPredicted RBP16.7■□□□□ 0.26
UBE3A-224ENST00000635914 CCAR1Q8IX12 1150 aaKnown RBP16.7■□□□□ 0.26
UBE3A-224ENST00000635914 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
UBE3A-224ENST00000635914 CCDC73Q6ZRK6 1079 aa16.7■□□□□ 0.26
UBE3A-224ENST00000635914 TXLNAP40222 546 aa16.7■□□□□ 0.26
UBE3A-224ENST00000635914 GOLGA6L10A6NI86 522 aa16.69■□□□□ 0.26
UBE3A-224ENST00000635914 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
UBE3A-224ENST00000635914 BICD2Q8TD16 824 aa16.69■□□□□ 0.26
UBE3A-224ENST00000635914 EZRP15311 586 aaKnown RBP16.69■□□□□ 0.26
UBE3A-224ENST00000635914 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
UBE3A-224ENST00000635914 HMGB2P26583 209 aaKnown RBP16.69■□□□□ 0.26
UBE3A-224ENST00000635914 DNAI2Q9GZS0 605 aa16.69■□□□□ 0.26
UBE3A-224ENST00000635914 MNS1Q8NEH6 495 aa16.68■□□□□ 0.26
UBE3A-224ENST00000635914 SMARCE1Q969G3 411 aa16.68■□□□□ 0.26
UBE3A-224ENST00000635914 H0YHG0 523 aa16.68■□□□□ 0.26
UBE3A-224ENST00000635914 AAMPQ13685 434 aa16.68■□□□□ 0.26
UBE3A-224ENST00000635914 INCENPQ9NQS7 918 aa16.67■□□□□ 0.26
UBE3A-224ENST00000635914 E9PSI1 815 aa16.67■□□□□ 0.26
UBE3A-224ENST00000635914 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■■■□□ 17.3
UBE3A-224ENST00000635914 FBXW7Q969H0 707 aa16.67■□□□□ 0.26
UBE3A-224ENST00000635914 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
UBE3A-224ENST00000635914 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
UBE3A-224ENST00000635914 TMEM132AQ24JP5 1023 aa16.67■□□□□ 0.26
UBE3A-224ENST00000635914 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
UBE3A-224ENST00000635914 DDX19BQ9UMR2 479 aa16.66■□□□□ 0.26
UBE3A-224ENST00000635914 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
UBE3A-224ENST00000635914 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBE3A-224ENST00000635914 LETM1O95202 739 aaPredicted RBP16.65■□□□□ 0.26
UBE3A-224ENST00000635914 ZKSCAN2Q63HK3 967 aa16.65■□□□□ 0.26
UBE3A-224ENST00000635914 SMG6Q86US8 1419 aaKnown RBP16.65■□□□□ 0.26
UBE3A-224ENST00000635914 SEPT7Q16181 437 aaKnown RBP16.65■□□□□ 0.26
UBE3A-224ENST00000635914 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
UBE3A-224ENST00000635914 MYBBP1AQ9BQG0 1328 aaKnown RBP16.65■□□□□ 0.26
UBE3A-224ENST00000635914 CDK5RAP3Q96JB5 506 aa16.64■□□□□ 0.25
UBE3A-224ENST00000635914 PSMA5P28066 241 aa16.64■□□□□ 0.25
UBE3A-224ENST00000635914 IQCEQ6IPM2 695 aa16.64■□□□□ 0.25
UBE3A-224ENST00000635914 MAGEC2Q9UBF1 373 aaPredicted RBP16.63■□□□□ 0.25
UBE3A-224ENST00000635914 RABEP1Q15276 862 aa16.63■□□□□ 0.25
UBE3A-224ENST00000635914 GBP2P32456 591 aaPredicted RBP16.63■□□□□ 0.25
UBE3A-224ENST00000635914 NUCB2P80303 420 aa16.63■□□□□ 0.25
UBE3A-224ENST00000635914 LTV1Q96GA3 475 aaPredicted RBP16.63■□□□□ 0.25
UBE3A-224ENST00000635914 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms