RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 ATG7O95352 703 aa11.25□□□□□ -0.61
SMARCA2-243ENST00000635590 EN1Q05925 392 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-243ENST00000635590 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
SMARCA2-243ENST00000635590 ZNF710Q8N1W2 664 aa11.25□□□□□ -0.61
SMARCA2-243ENST00000635590 OATP04181 439 aa11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 WASHC4Q2M389 1173 aa11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 USP17L8P0C7I0 530 aa11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 PXYLP1Q8TE99 480 aa11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 NDUFB9Q9Y6M9 179 aa11.23□□□□□ -0.61
SMARCA2-243ENST00000635590 MAP3K7O43318 606 aa11.22□□□□□ -0.61
SMARCA2-243ENST00000635590 QPCTQ16769 361 aa11.22□□□□□ -0.61
SMARCA2-243ENST00000635590 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
SMARCA2-243ENST00000635590 DNAJC14Q6Y2X3 702 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-243ENST00000635590 SPTLC1O15269 473 aa11.21□□□□□ -0.61
SMARCA2-243ENST00000635590 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.62
SMARCA2-243ENST00000635590 UCN2Q96RP3 112 aa11.2□□□□□ -0.62
SMARCA2-243ENST00000635590 ALG2Q9H553 416 aa11.2□□□□□ -0.62
SMARCA2-243ENST00000635590 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
SMARCA2-243ENST00000635590 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
SMARCA2-243ENST00000635590 EIF4G1Q04637 1599 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-243ENST00000635590 GPR37L1O60883 481 aa11.19□□□□□ -0.62
SMARCA2-243ENST00000635590 ZNF16P17020 682 aaPredicted RBP11.19□□□□□ -0.62
SMARCA2-243ENST00000635590 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-243ENST00000635590 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
SMARCA2-243ENST00000635590 LILRB3O75022 631 aa11.18□□□□□ -0.62
SMARCA2-243ENST00000635590 ERCC3P19447 782 aa11.18□□□□□ -0.62
SMARCA2-243ENST00000635590 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-243ENST00000635590 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
SMARCA2-243ENST00000635590 ADGRG1Q9Y653 693 aa11.18□□□□□ -0.62
SMARCA2-243ENST00000635590 TMEM121BQ9BXQ6 578 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-243ENST00000635590 DCAF1Q9Y4B6 1507 aa11.17□□□□□ -0.62
SMARCA2-243ENST00000635590 PPM1GO15355 546 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-243ENST00000635590 CCER1Q8TC90 406 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-243ENST00000635590 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-243ENST00000635590 TCF3P15923 654 aa11.16□□□□□ -0.62
SMARCA2-243ENST00000635590 NOM1Q5C9Z4 860 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-243ENST00000635590 SIRT1Q96EB6 747 aa11.15□□□□□ -0.62
SMARCA2-243ENST00000635590 EPAS1Q99814 870 aa11.15□□□□□ -0.62
SMARCA2-243ENST00000635590 DRC1Q96MC2 740 aa11.14□□□□□ -0.63
SMARCA2-243ENST00000635590 MOXD2PA6NHM9 499 aa11.14□□□□□ -0.63
SMARCA2-243ENST00000635590 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
SMARCA2-243ENST00000635590 MAFBQ9Y5Q3 323 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-243ENST00000635590 PHF14O94880 888 aa11.13□□□□□ -0.63
SMARCA2-243ENST00000635590 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
SMARCA2-243ENST00000635590 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-243ENST00000635590 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
SMARCA2-243ENST00000635590 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-243ENST00000635590 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
SMARCA2-243ENST00000635590 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-243ENST00000635590 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
SMARCA2-243ENST00000635590 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-243ENST00000635590 PRR7Q8TB68 274 aa11.12□□□□□ -0.63
SMARCA2-243ENST00000635590 SREK1Q8WXA9 508 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-243ENST00000635590 ZCCHC6Q5VYS8 1495 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-243ENST00000635590 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-243ENST00000635590 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
SMARCA2-243ENST00000635590 HMX1Q9NP08 348 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-243ENST00000635590 L3MBTL3Q96JM7 780 aaPredicted RBP11.1□□□□□ -0.63
SMARCA2-243ENST00000635590 C8orf37Q96NL8 207 aa11.1□□□□□ -0.63
SMARCA2-243ENST00000635590 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
SMARCA2-243ENST00000635590 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
SMARCA2-243ENST00000635590 NUTM2BA6NNL0 878 aaPredicted RBP11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 NUTM2EB1AL46 878 aaPredicted RBP11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 NDUFV2P19404 249 aa11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 TIE1P35590 1138 aa11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 NUTM2DQ5VT03 806 aaPredicted RBP11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 NUTM2AQ8IVF1 878 aaPredicted RBP11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 SCRIBQ14160 1630 aa11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 CD46P15529 392 aa11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 GJA5P36382 358 aa11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 GIPC2Q8TF65 315 aa11.09□□□□□ -0.63
SMARCA2-243ENST00000635590 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
SMARCA2-243ENST00000635590 NUTM1Q86Y26 1132 aa11.08□□□□□ -0.64
SMARCA2-243ENST00000635590 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
SMARCA2-243ENST00000635590 PCDHGA10Q9Y5H3 936 aa11.07□□□□□ -0.64
SMARCA2-243ENST00000635590 TMEM92Q6UXU6 159 aa11.07□□□□□ -0.64
SMARCA2-243ENST00000635590 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
SMARCA2-243ENST00000635590 SLAIN1Q8ND83 568 aa11.07□□□□□ -0.64
SMARCA2-243ENST00000635590 ZMIZ1Q9ULJ6 1067 aa11.07□□□□□ -0.64
SMARCA2-243ENST00000635590 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
SMARCA2-243ENST00000635590 ELOAQ14241 798 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-243ENST00000635590 STK32AQ8WU08 396 aa11.05□□□□□ -0.64
SMARCA2-243ENST00000635590 PTCD2Q8WV60 388 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-243ENST00000635590 SOX11P35716 441 aa11.04□□□□□ -0.64
SMARCA2-243ENST00000635590 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMARCA2-243ENST00000635590 TTC13Q8NBP0 860 aa11.04□□□□□ -0.64
SMARCA2-243ENST00000635590 PRPF38BQ5VTL8 546 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-243ENST00000635590 SOWAHDA6NJG2 315 aa11.02□□□□□ -0.64
SMARCA2-243ENST00000635590 ARID4AP29374 1257 aaPredicted RBP11.02□□□□□ -0.64
SMARCA2-243ENST00000635590 KANK4Q5T7N3 995 aaPredicted RBP11.02□□□□□ -0.64
SMARCA2-243ENST00000635590 ATP9BO43861 1147 aa11.02□□□□□ -0.65
SMARCA2-243ENST00000635590 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
SMARCA2-243ENST00000635590 CTDSPL2Q05D32 466 aa11.02□□□□□ -0.65
SMARCA2-243ENST00000635590 TYW1BQ6NUM6 668 aa11.02□□□□□ -0.65
SMARCA2-243ENST00000635590 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms