RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 MCM6Q14566 821 aa11.81□□□□□ -0.52
SMARCA2-240ENST00000635392 FBXO31Q5XUX0 539 aaPredicted RBP11.81□□□□□ -0.52
SMARCA2-240ENST00000635392 C1orf115Q9H7X2 142 aa11.81□□□□□ -0.52
SMARCA2-240ENST00000635392 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
SMARCA2-240ENST00000635392 CD46P15529 392 aa11.8□□□□□ -0.52
SMARCA2-240ENST00000635392 NUDT18Q6ZVK8 323 aa11.8□□□□□ -0.52
SMARCA2-240ENST00000635392 A6NJR5 290 aa11.79□□□□□ -0.52
SMARCA2-240ENST00000635392 TATDN2Q93075 761 aa11.79□□□□□ -0.52
SMARCA2-240ENST00000635392 SPIRE2Q8WWL2 714 aa11.78□□□□□ -0.52
SMARCA2-240ENST00000635392 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
SMARCA2-240ENST00000635392 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
SMARCA2-240ENST00000635392 TMEM134Q9H6X4 195 aa11.77□□□□□ -0.53
SMARCA2-240ENST00000635392 DNAJB2P25686 324 aa11.76□□□□□ -0.53
SMARCA2-240ENST00000635392 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
SMARCA2-240ENST00000635392 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
SMARCA2-240ENST00000635392 DIXDC1Q155Q3 683 aa11.75□□□□□ -0.53
SMARCA2-240ENST00000635392 PROX2Q3B8N5 592 aa11.75□□□□□ -0.53
SMARCA2-240ENST00000635392 CLUAP1Q96AJ1 413 aa11.75□□□□□ -0.53
SMARCA2-240ENST00000635392 PNMA3Q9UL41 463 aa11.75□□□□□ -0.53
SMARCA2-240ENST00000635392 PACS2Q86VP3 889 aa11.74□□□□□ -0.53
SMARCA2-240ENST00000635392 SPTLC1O15269 473 aa11.73□□□□□ -0.53
SMARCA2-240ENST00000635392 TUSC1Q2TAM9 212 aa11.73□□□□□ -0.53
SMARCA2-240ENST00000635392 PPP2R2DQ66LE6 453 aa11.73□□□□□ -0.53
SMARCA2-240ENST00000635392 LSM11P83369 360 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMARCA2-240ENST00000635392 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
SMARCA2-240ENST00000635392 ZBED2Q9BTP6 218 aa11.72□□□□□ -0.53
SMARCA2-240ENST00000635392 SMAPO00193 183 aa11.71□□□□□ -0.53
SMARCA2-240ENST00000635392 TRAK2O60296 914 aa11.71□□□□□ -0.53
SMARCA2-240ENST00000635392 RFC5P40937 340 aa11.71□□□□□ -0.53
SMARCA2-240ENST00000635392 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
SMARCA2-240ENST00000635392 KCNK17Q96T54 332 aa11.71□□□□□ -0.53
SMARCA2-240ENST00000635392 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
SMARCA2-240ENST00000635392 DDX11L8A8MPP1 907 aa11.69□□□□□ -0.54
SMARCA2-240ENST00000635392 UBTFP17480 764 aaKnown RBP11.69□□□□□ -0.54
SMARCA2-240ENST00000635392 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-240ENST00000635392 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
SMARCA2-240ENST00000635392 BANK1Q8NDB2 785 aa11.69□□□□□ -0.54
SMARCA2-240ENST00000635392 KIAA1468Q9P260 1216 aa11.69□□□□□ -0.54
SMARCA2-240ENST00000635392 MOXD2PA6NHM9 499 aa11.68□□□□□ -0.54
SMARCA2-240ENST00000635392 GJA5P36382 358 aa11.68□□□□□ -0.54
SMARCA2-240ENST00000635392 FNBP4Q8N3X1 1017 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-240ENST00000635392 POM121Q96HA1 1249 aa11.68□□□□□ -0.54
SMARCA2-240ENST00000635392 PSEN2P49810 448 aa11.67□□□□□ -0.54
SMARCA2-240ENST00000635392 SNRKQ9NRH2 765 aa11.67□□□□□ -0.54
SMARCA2-240ENST00000635392 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
SMARCA2-240ENST00000635392 APBB1O00213 710 aa11.66□□□□□ -0.54
SMARCA2-240ENST00000635392 NDUFV2P19404 249 aa11.65□□□□□ -0.54
SMARCA2-240ENST00000635392 TMEM259Q4ZIN3 620 aa11.65□□□□□ -0.54
SMARCA2-240ENST00000635392 NUTM1Q86Y26 1132 aa11.65□□□□□ -0.54
SMARCA2-240ENST00000635392 SLC4A5Q9BY07 1137 aa11.65□□□□□ -0.54
SMARCA2-240ENST00000635392 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
SMARCA2-240ENST00000635392 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
SMARCA2-240ENST00000635392 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
SMARCA2-240ENST00000635392 LILRB3O75022 631 aa11.63□□□□□ -0.55
SMARCA2-240ENST00000635392 SLC10A3P09131 477 aa11.63□□□□□ -0.55
SMARCA2-240ENST00000635392 QPCTQ16769 361 aa11.63□□□□□ -0.55
SMARCA2-240ENST00000635392 PBX2P40425 430 aa11.62□□□□□ -0.55
SMARCA2-240ENST00000635392 GCGRP47871 477 aa11.62□□□□□ -0.55
SMARCA2-240ENST00000635392 RABGEF1Q9UJ41 708 aa11.62□□□□□ -0.55
SMARCA2-240ENST00000635392 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
SMARCA2-240ENST00000635392 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
SMARCA2-240ENST00000635392 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
SMARCA2-240ENST00000635392 PROSER2Q86WR7 435 aaPredicted RBP11.61□□□□□ -0.55
SMARCA2-240ENST00000635392 KDM4AO75164 1064 aa11.6□□□□□ -0.55
SMARCA2-240ENST00000635392 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
SMARCA2-240ENST00000635392 SWT1Q5T5J6 900 aaKnown RBP11.59□□□□□ -0.55
SMARCA2-240ENST00000635392 RDH13Q8NBN7 331 aa11.59□□□□□ -0.55
SMARCA2-240ENST00000635392 MTMR14Q8NCE2 650 aa11.59□□□□□ -0.55
SMARCA2-240ENST00000635392 HOXA2O43364 376 aa11.57□□□□□ -0.56
SMARCA2-240ENST00000635392 USP46P62068 366 aa11.57□□□□□ -0.56
SMARCA2-240ENST00000635392 CSPP1Q1MSJ5 1256 aa11.57□□□□□ -0.56
SMARCA2-240ENST00000635392 KCNH8Q96L42 1107 aa11.57□□□□□ -0.56
SMARCA2-240ENST00000635392 ARID3AQ99856 593 aa11.57□□□□□ -0.56
SMARCA2-240ENST00000635392 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
SMARCA2-240ENST00000635392 SOCS7O14512 581 aa11.56□□□□□ -0.56
SMARCA2-240ENST00000635392 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
SMARCA2-240ENST00000635392 CABLES1Q8TDN4 633 aa11.56□□□□□ -0.56
SMARCA2-240ENST00000635392 PCDHGC3Q9UN70 934 aa11.56□□□□□ -0.56
SMARCA2-240ENST00000635392 RAD21O60216 631 aa11.55□□□□□ -0.56
SMARCA2-240ENST00000635392 ZNF777Q9ULD5 760 aaPredicted RBP11.55□□□□□ -0.56
SMARCA2-240ENST00000635392 VPS9D1Q9Y2B5 631 aa11.55□□□□□ -0.56
SMARCA2-240ENST00000635392 HRCP23327 699 aa11.53□□□□□ -0.56
SMARCA2-240ENST00000635392 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
SMARCA2-240ENST00000635392 CCDC82Q8N4S0 544 aa11.53□□□□□ -0.56
SMARCA2-240ENST00000635392 HLA-CQ95604 372 aa11.53□□□□□ -0.56
SMARCA2-240ENST00000635392 RSPH4AQ5TD94 716 aa11.52□□□□□ -0.57
SMARCA2-240ENST00000635392 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
SMARCA2-240ENST00000635392 FDX1P10109 184 aa11.51□□□□□ -0.57
SMARCA2-240ENST00000635392 AP1G2O75843 785 aa11.5□□□□□ -0.57
SMARCA2-240ENST00000635392 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
SMARCA2-240ENST00000635392 ADGRD1Q6QNK2 874 aa11.5□□□□□ -0.57
SMARCA2-240ENST00000635392 ZBTB3Q9H5J0 574 aa11.49□□□□□ -0.57
SMARCA2-240ENST00000635392 GDPD2Q9HCC8 539 aa11.49□□□□□ -0.57
SMARCA2-240ENST00000635392 PLA2G2EQ9NZK7 142 aa11.49□□□□□ -0.57
SMARCA2-240ENST00000635392 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-240ENST00000635392 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-240ENST00000635392 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-240ENST00000635392 LAPTM4BQ86VI4 370 aa11.48□□□□□ -0.57
SMARCA2-240ENST00000635392 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-240ENST00000635392 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms