RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
PSPC1-207ENST00000635251 EIF3AQ14152 1382 aaKnown RBP14.1□□□□□ -0.15
PSPC1-207ENST00000635251 ZFYVE16Q7Z3T8 1539 aa14.1□□□□□ -0.15
PSPC1-207ENST00000635251 CEP152O94986 1710 aa14.1□□□□□ -0.15
PSPC1-207ENST00000635251 CLTCL1P53675 1640 aa14.1□□□□□ -0.15
PSPC1-207ENST00000635251 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
PSPC1-207ENST00000635251 MS4A1P11836 297 aa14.1□□□□□ -0.15
PSPC1-207ENST00000635251 AMER1Q5JTC6 1135 aaPredicted RBP14.1□□□□□ -0.15
PSPC1-207ENST00000635251 AEBP2Q6ZN18 517 aaPredicted RBP14.1□□□□□ -0.15
PSPC1-207ENST00000635251 SYNMO15061 1565 aa14.09□□□□□ -0.15
PSPC1-207ENST00000635251 PTPRTO14522 1441 aa14.09□□□□□ -0.15
PSPC1-207ENST00000635251 DEKP35659 375 aaKnown RBP14.08□□□□□ -0.15
PSPC1-207ENST00000635251 KIF3BO15066 747 aa14.08□□□□□ -0.16
PSPC1-207ENST00000635251 CLASP1Q7Z460 1538 aa14.07□□□□□ -0.16
PSPC1-207ENST00000635251 ASXL1Q8IXJ9 1541 aa14.07□□□□□ -0.16
PSPC1-207ENST00000635251 BACH2Q9BYV9 841 aa14.07□□□□□ -0.16
PSPC1-207ENST00000635251 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
PSPC1-207ENST00000635251 TET3O43151 1660 aa14.07□□□□□ -0.16
PSPC1-207ENST00000635251 PLEKHH1Q9ULM0 1364 aa14.06□□□□□ -0.16
PSPC1-207ENST00000635251 GOLGA2Q08379 1002 aa14.06□□□□□ -0.16
PSPC1-207ENST00000635251 RTL5Q5HYW3 569 aaPredicted RBP14.06□□□□□ -0.16
PSPC1-207ENST00000635251 C20orf194Q5TEA3 1177 aa14.06□□□□□ -0.16
PSPC1-207ENST00000635251 DEPDC5O75140 1603 aa14.05□□□□□ -0.16
PSPC1-207ENST00000635251 ATP7AQ04656 1500 aa14.05□□□□□ -0.16
PSPC1-207ENST00000635251 DUSP27Q5VZP5 1158 aa14.04□□□□□ -0.16
PSPC1-207ENST00000635251 FANCAO15360 1455 aa14.04□□□□□ -0.16
PSPC1-207ENST00000635251 PIK3C2GO75747 1445 aa14.04□□□□□ -0.16
PSPC1-207ENST00000635251 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.04□□□□□ -0.16
PSPC1-207ENST00000635251 CFAP70Q5T0N1 1121 aa14.03□□□□□ -0.16
PSPC1-207ENST00000635251 CCDC146Q8IYE0 955 aa14.03□□□□□ -0.16
PSPC1-207ENST00000635251 KDM5AP29375 1690 aaKnown RBP14.03□□□□□ -0.16
PSPC1-207ENST00000635251 SKAP1Q86WV1 359 aa14.02□□□□□ -0.16
PSPC1-207ENST00000635251 INO80Q9ULG1 1556 aaPredicted RBP14.02□□□□□ -0.17
PSPC1-207ENST00000635251 MYOM1P52179 1685 aa14.02□□□□□ -0.17
PSPC1-207ENST00000635251 NPC1L1Q9UHC9 1359 aa14.02□□□□□ -0.17
PSPC1-207ENST00000635251 DAXXQ9UER7 740 aaPredicted RBP14.01□□□□□ -0.17
PSPC1-207ENST00000635251 ZNF521Q96K83 1311 aa14.01□□□□□ -0.17
PSPC1-207ENST00000635251 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
PSPC1-207ENST00000635251 VWDEQ8N2E2 1590 aa14.01□□□□□ -0.17
PSPC1-207ENST00000635251 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
PSPC1-207ENST00000635251 ADGRF5Q8IZF2 1346 aa14□□□□□ -0.17
PSPC1-207ENST00000635251 ABCA9Q8IUA7 1624 aa14□□□□□ -0.17
PSPC1-207ENST00000635251 SLFN5Q08AF3 891 aa13.99□□□□□ -0.17
PSPC1-207ENST00000635251 UGGT1Q9NYU2 1555 aa13.99□□□□□ -0.17
PSPC1-207ENST00000635251 APAF1O14727 1248 aa13.99□□□□□ -0.17
PSPC1-207ENST00000635251 CENPQQ7L2Z9 268 aaPredicted RBP13.99□□□□□ -0.17
PSPC1-207ENST00000635251 MAP3K4Q9Y6R4 1608 aa13.99□□□□□ -0.17
PSPC1-207ENST00000635251 MYOM2P54296 1465 aa13.98□□□□□ -0.17
PSPC1-207ENST00000635251 ERVK-7P63135 1459 aa13.98□□□□□ -0.17
PSPC1-207ENST00000635251 CHGAP10645 457 aaKnown RBP13.98□□□□□ -0.17
PSPC1-207ENST00000635251 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
PSPC1-207ENST00000635251 NEURL4Q96JN8 1562 aa13.97□□□□□ -0.17
PSPC1-207ENST00000635251 KDM2BQ8NHM5 1336 aa13.97□□□□□ -0.17
PSPC1-207ENST00000635251 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
PSPC1-207ENST00000635251 DDRGK1Q96HY6 314 aa13.96□□□□□ -0.17
PSPC1-207ENST00000635251 KIF1BO60333 1816 aa13.96□□□□□ -0.17
PSPC1-207ENST00000635251 CARD14Q9BXL6 1004 aa13.95□□□□□ -0.18
PSPC1-207ENST00000635251 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
PSPC1-207ENST00000635251 NKTRP30414 1462 aaKnown RBP13.94□□□□□ -0.18
PSPC1-207ENST00000635251 EFCAB6Q5THR3 1501 aa13.94□□□□□ -0.18
PSPC1-207ENST00000635251 E9PSI1 815 aa13.94□□□□□ -0.18
PSPC1-207ENST00000635251 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
PSPC1-207ENST00000635251 TRMT2AQ8IZ69 625 aaKnown RBP13.93□□□□□ -0.18
PSPC1-207ENST00000635251 CENPJQ9HC77 1338 aaPredicted RBP13.92□□□□□ -0.18
PSPC1-207ENST00000635251 NOS1P29475 1434 aa13.92□□□□□ -0.18
PSPC1-207ENST00000635251 MROH2AA6NES4 1674 aa13.92□□□□□ -0.18
PSPC1-207ENST00000635251 BCAR3O75815 825 aa13.92□□□□□ -0.18
PSPC1-207ENST00000635251 NEFMP07197 916 aa13.92□□□□□ -0.18
PSPC1-207ENST00000635251 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
PSPC1-207ENST00000635251 ASXL2Q76L83 1435 aa13.92□□□□□ -0.18
PSPC1-207ENST00000635251 PPM1GO15355 546 aaPredicted RBP13.91□□□□□ -0.18
PSPC1-207ENST00000635251 NGEFQ8N5V2 710 aa13.91□□□□□ -0.18
PSPC1-207ENST00000635251 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
PSPC1-207ENST00000635251 RGS3P49796 1198 aa13.9□□□□□ -0.18
PSPC1-207ENST00000635251 FAM161AQ3B820 660 aa13.9□□□□□ -0.18
PSPC1-207ENST00000635251 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
PSPC1-207ENST00000635251 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
PSPC1-207ENST00000635251 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
PSPC1-207ENST00000635251 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
PSPC1-207ENST00000635251 SBNO2Q9Y2G9 1366 aa13.89□□□□□ -0.19
PSPC1-207ENST00000635251 NRXN1Q9ULB1 1477 aa13.89□□□□□ -0.19
PSPC1-207ENST00000635251 KIDINS220Q9ULH0 1771 aa13.89□□□□□ -0.19
PSPC1-207ENST00000635251 MYO3AQ8NEV4 1616 aa13.89□□□□□ -0.19
PSPC1-207ENST00000635251 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
PSPC1-207ENST00000635251 NSD3Q9BZ95 1437 aa13.89□□□□□ -0.19
PSPC1-207ENST00000635251 ZNF518AQ6AHZ1 1483 aa13.88□□□□□ -0.19
PSPC1-207ENST00000635251 GGT6Q6P531 493 aa13.88□□□□□ -0.19
PSPC1-207ENST00000635251 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
PSPC1-207ENST00000635251 LMTK2Q8IWU2 1503 aa13.88□□□□□ -0.19
PSPC1-207ENST00000635251 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
PSPC1-207ENST00000635251 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
PSPC1-207ENST00000635251 USP35Q9P2H5 1018 aa13.87□□□□□ -0.19
PSPC1-207ENST00000635251 ADGRB3O60242 1522 aa13.87□□□□□ -0.19
PSPC1-207ENST00000635251 WWC1Q8IX03 1113 aa13.87□□□□□ -0.19
PSPC1-207ENST00000635251 SLC12A5Q9H2X9 1139 aa13.87□□□□□ -0.19
PSPC1-207ENST00000635251 SETBP1Q9Y6X0 1596 aa13.86□□□□□ -0.19
PSPC1-207ENST00000635251 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
PSPC1-207ENST00000635251 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
PSPC1-207ENST00000635251 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
PSPC1-207ENST00000635251 CGNL1Q0VF96 1302 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms