RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 GDF9O60383 454 aa8.39□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 ZNF697Q5TEC3 545 aa8.39□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 ANKLE1Q8NAG6 615 aa8.39□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 CDHR5Q9HBB8 845 aa8.39□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 AAASQ9NRG9 546 aa8.39□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 PCDHB3Q9Y5E6 796 aa8.39□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 PPEF1O14829 653 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 BLOC1S3Q6QNY0 202 aa8.38□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 LIAT1Q6ZQX7 453 aa8.38□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 BBXQ8WY36 941 aaPredicted RBP8.38□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 PRR14Q9BWN1 585 aa8.37□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 TLL1O43897 1013 aa8.36□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 SLC4A3P48751 1232 aa8.36□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 WFS1O76024 890 aa8.34□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 S1PR4O95977 384 aa8.34□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 OSBPP22059 807 aa8.34□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 PADI6Q6TGC4 694 aa8.34□□□□□ -1.07
NPHP3-ACAD11-202ENST00000632629 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.33□□□□□ -1.08
NPHP3-ACAD11-202ENST00000632629 STK17AQ9UEE5 414 aa8.33□□□□□ -1.08
NPHP3-ACAD11-202ENST00000632629 EYA1Q99502 592 aa8.32□□□□□ -1.08
NPHP3-ACAD11-202ENST00000632629 NPDC1Q9NQX5 325 aaPredicted RBP8.31□□□□□ -1.08
NPHP3-ACAD11-202ENST00000632629 DACH1Q9UI36 760 aa8.31□□□□□ -1.08
NPHP3-ACAD11-202ENST00000632629 PLA2G2CQ5R387 149 aa8.29□□□□□ -1.08
NPHP3-ACAD11-202ENST00000632629 CRIPAKQ8N1N5 446 aa8.28□□□□□ -1.08
NPHP3-ACAD11-202ENST00000632629 C11orf95C9JLR9 678 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 ADH1BP00325 375 aa8.27□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 FOXC1Q12948 553 aa8.27□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 PKD2L1Q9P0L9 805 aa8.27□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 ARIH1Q9Y4X5 557 aaPredicted RBP8.27□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 WIPF1O43516 503 aa8.26□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 INSM1Q01101 510 aaPredicted RBP8.26□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 E2F4Q16254 413 aa8.26□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 GMPR2Q9P2T1 348 aaKnown RBP8.26□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 SPRYD3Q8NCJ5 442 aa8.25□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 AVPP01185 164 aa8.24□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 KMT5BQ4FZB7 885 aa8.24□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 LMOD2Q6P5Q4 547 aa8.24□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 SLC6A16Q9GZN6 736 aa8.24□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 AXIN1O15169 862 aa8.23□□□□□ -1.09
NPHP3-ACAD11-202ENST00000632629 NR1I2O75469 434 aa8.21□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 CFHP08603 1231 aa8.21□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 DNAJB2P25686 324 aa8.21□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 TOR4AQ9NXH8 423 aa8.21□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 TMEM134Q9H6X4 195 aa8.2□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 CYP4X1Q8N118 509 aa8.18□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 RPIAP49247 311 aa8.17□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 LOC100996750A0A140TA64 210 aa8.16□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 RBM46Q8TBY0 533 aaKnown RBP8.16□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 KRTAP4-6Q9BYQ5 205 aa8.16□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 CD2BP2O95400 341 aaKnown RBP8.15□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 SLC10A3P09131 477 aa8.15□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 SPSB2Q99619 263 aa8.15□□□□□ -1.1
NPHP3-ACAD11-202ENST00000632629 RCCD1A6NED2 376 aa8.14□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 TERTO14746 1132 aaKnown RBP8.14□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 WDR70Q9NW82 654 aa8.14□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 ADGRG1Q9Y653 693 aa8.14□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 SNRPBP14678 240 aaKnown RBP8.12□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 PTGDRQ13258 359 aa8.11□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 FCF1Q9Y324 198 aaKnown RBP8.11□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 TTC24A2A3L6 582 aaPredicted RBP8.1□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 FAM161AQ3B820 660 aa8.1□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
NPHP3-ACAD11-202ENST00000632629 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 FAM181BA6NEQ2 426 aa8.07□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 SENP2Q9HC62 589 aa8.07□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 SMPD1P17405 629 aa8.06□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.05□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 MLLT3P42568 568 aaPredicted RBP8.04□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 SNIP1Q8TAD8 396 aaKnown RBP8.04□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 THAP11Q96EK4 314 aa8.04□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 ZBTB24O43167 697 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 RSPH4AQ5TD94 716 aa8.03□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-ACAD11-202ENST00000632629 J3QL48 77 aa8.02□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 WNT7AO00755 349 aa8.02□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 MORN1Q5T089 497 aa8.02□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 SLC16A10Q8TF71 515 aa8.01□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 KIFC2Q96AC6 838 aa8.01□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 ZSCAN1Q8NBB4 408 aa8□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 PRDM9Q9NQV7 894 aa8□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 NUTM2FA1L443 756 aa7.99□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 FMNL1O95466 1100 aaPredicted RBP7.99□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 GMPRP36959 345 aa7.99□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 PLCB2Q00722 1185 aa7.99□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 HPS1Q92902 700 aa7.99□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 MRGPRX2Q96LB1 330 aa7.98□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 NXF1Q9UBU9 619 aaKnown RBP7.98□□□□□ -1.13
NPHP3-ACAD11-202ENST00000632629 OATP04181 439 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms