RNA–Protein interactions for RNA: ENST00000630720.3

TCF4-273, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-273ENST00000630720 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
TCF4-273ENST00000630720 ZNF142P52746 1687 aaPredicted RBP12.68□□□□□ -0.38
TCF4-273ENST00000630720 CAPN15O75808 1086 aa12.68□□□□□ -0.38
TCF4-273ENST00000630720 NLRP1Q9C000 1473 aa12.67□□□□□ -0.38
TCF4-273ENST00000630720 PIK3C2BO00750 1634 aa12.67□□□□□ -0.38
TCF4-273ENST00000630720 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
TCF4-273ENST00000630720 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
TCF4-273ENST00000630720 NEUROD1Q13562 356 aa12.65□□□□□ -0.38
TCF4-273ENST00000630720 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
TCF4-273ENST00000630720 UBR1Q8IWV7 1749 aa12.64□□□□□ -0.39
TCF4-273ENST00000630720 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
TCF4-273ENST00000630720 STRCQ7RTU9 1775 aa12.64□□□□□ -0.39
TCF4-273ENST00000630720 PTPRTO14522 1441 aa12.64□□□□□ -0.39
TCF4-273ENST00000630720 CHGAP10645 457 aaKnown RBP12.63□□□□□ -0.39
TCF4-273ENST00000630720 SIN3AQ96ST3 1273 aa12.63□□□□□ -0.39
TCF4-273ENST00000630720 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
TCF4-273ENST00000630720 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
TCF4-273ENST00000630720 CLTCL1P53675 1640 aa12.62□□□□□ -0.39
TCF4-273ENST00000630720 THEMISQ8N1K5 641 aaPredicted RBP12.62□□□□□ -0.39
TCF4-273ENST00000630720 SLC52A1Q9NWF4 448 aa12.62□□□□□ -0.39
TCF4-273ENST00000630720 MIER1Q8N108 512 aa12.61□□□□□ -0.39
TCF4-273ENST00000630720 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
TCF4-273ENST00000630720 TRPM2O94759 1503 aa12.6□□□□□ -0.39
TCF4-273ENST00000630720 LTKP29376 864 aa12.6□□□□□ -0.39
TCF4-273ENST00000630720 ADGRB3O60242 1522 aa12.6□□□□□ -0.39
TCF4-273ENST00000630720 TMEM131LA2VDJ0 1609 aa12.6□□□□□ -0.39
TCF4-273ENST00000630720 NUTM2DQ5VT03 806 aaPredicted RBP12.59□□□□□ -0.39
TCF4-273ENST00000630720 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
TCF4-273ENST00000630720 TMEM2Q9UHN6 1383 aa12.57□□□□□ -0.4
TCF4-273ENST00000630720 NEURL4Q96JN8 1562 aa12.57□□□□□ -0.4
TCF4-273ENST00000630720 ARHGAP23Q9P227 1491 aa12.57□□□□□ -0.4
TCF4-273ENST00000630720 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
TCF4-273ENST00000630720 TXNDC2Q86VQ3 553 aa12.56□□□□□ -0.4
TCF4-273ENST00000630720 ANKLE2Q86XL3 938 aa12.56□□□□□ -0.4
TCF4-273ENST00000630720 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
TCF4-273ENST00000630720 SLIT1O75093 1534 aa12.55□□□□□ -0.4
TCF4-273ENST00000630720 KDM5AP29375 1690 aaKnown RBP12.55□□□□□ -0.4
TCF4-273ENST00000630720 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
TCF4-273ENST00000630720 CCDC144AA2RUR9 1427 aa12.55□□□□□ -0.4
TCF4-273ENST00000630720 SCAF11Q99590 1463 aaKnown RBP12.54□□□□□ -0.4
TCF4-273ENST00000630720 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
TCF4-273ENST00000630720 KIF1BO60333 1816 aa12.54□□□□□ -0.4
TCF4-273ENST00000630720 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
TCF4-273ENST00000630720 RIMS2Q9UQ26 1411 aa12.54□□□□□ -0.4
TCF4-273ENST00000630720 TONSLQ96HA7 1378 aa12.54□□□□□ -0.4
TCF4-273ENST00000630720 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
TCF4-273ENST00000630720 NPHP4O75161 1426 aaPredicted RBP12.52□□□□□ -0.4
TCF4-273ENST00000630720 EID1Q9Y6B2 187 aa12.52□□□□□ -0.4
TCF4-273ENST00000630720 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
TCF4-273ENST00000630720 MED14O60244 1454 aa12.5□□□□□ -0.41
TCF4-273ENST00000630720 SPATA31E1Q6ZUB1 1445 aa12.5□□□□□ -0.41
TCF4-273ENST00000630720 PPP1R15AO75807 674 aaPredicted RBP12.5□□□□□ -0.41
TCF4-273ENST00000630720 SLC26A8Q96RN1 970 aa12.5□□□□□ -0.41
TCF4-273ENST00000630720 IQGAP1P46940 1657 aa12.5□□□□□ -0.41
TCF4-273ENST00000630720 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
TCF4-273ENST00000630720 NEXMIFQ5QGS0 1516 aa12.49□□□□□ -0.41
TCF4-273ENST00000630720 BCANQ96GW7 911 aa12.48□□□□□ -0.41
TCF4-273ENST00000630720 DSG3P32926 999 aa12.47□□□□□ -0.41
TCF4-273ENST00000630720 YTHDC1Q96MU7 727 aaKnown RBP12.47□□□□□ -0.41
TCF4-273ENST00000630720 PLEKHG1Q9ULL1 1385 aa12.46□□□□□ -0.41
TCF4-273ENST00000630720 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.46□□□□□ -0.42
TCF4-273ENST00000630720 L3MBTL2Q969R5 705 aa12.46□□□□□ -0.42
TCF4-273ENST00000630720 PPLO60437 1756 aa12.46□□□□□ -0.42
TCF4-273ENST00000630720 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
TCF4-273ENST00000630720 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
TCF4-273ENST00000630720 ADGRF5Q8IZF2 1346 aa12.45□□□□□ -0.42
TCF4-273ENST00000630720 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
TCF4-273ENST00000630720 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
TCF4-273ENST00000630720 NRXN3Q9Y4C0 1643 aa12.44□□□□□ -0.42
TCF4-273ENST00000630720 IFT172Q9UG01 1749 aa12.43□□□□□ -0.42
TCF4-273ENST00000630720 LTBP4Q8N2S1 1624 aa12.43□□□□□ -0.42
TCF4-273ENST00000630720 KDM2AQ9Y2K7 1162 aa12.43□□□□□ -0.42
TCF4-273ENST00000630720 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
TCF4-273ENST00000630720 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
TCF4-273ENST00000630720 DCAF11Q8TEB1 546 aa12.42□□□□□ -0.42
TCF4-273ENST00000630720 ABCB7O75027 752 aa12.41□□□□□ -0.42
TCF4-273ENST00000630720 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
TCF4-273ENST00000630720 METP08581 1390 aa12.4□□□□□ -0.42
TCF4-273ENST00000630720 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
TCF4-273ENST00000630720 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
TCF4-273ENST00000630720 PTPRUQ92729 1446 aa12.39□□□□□ -0.43
TCF4-273ENST00000630720 ALKQ9UM73 1620 aa12.38□□□□□ -0.43
TCF4-273ENST00000630720 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
TCF4-273ENST00000630720 SETD1AO15047 1707 aaKnown RBP12.37□□□□□ -0.43
TCF4-273ENST00000630720 TMEM132EQ6IEE7 984 aa12.37□□□□□ -0.43
TCF4-273ENST00000630720 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
TCF4-273ENST00000630720 CHD2O14647 1828 aaKnown RBP12.36□□□□□ -0.43
TCF4-273ENST00000630720 KCNA6P17658 529 aa12.36□□□□□ -0.43
TCF4-273ENST00000630720 CFAP70Q5T0N1 1121 aa12.36□□□□□ -0.43
TCF4-273ENST00000630720 MYOM2P54296 1465 aa12.36□□□□□ -0.43
TCF4-273ENST00000630720 AMOTL2Q9Y2J4 779 aa12.35□□□□□ -0.43
TCF4-273ENST00000630720 NRXN1Q9ULB1 1477 aa12.35□□□□□ -0.43
TCF4-273ENST00000630720 DIP2AQ14689 1571 aa12.35□□□□□ -0.43
TCF4-273ENST00000630720 NBPF8Q3BBV2 869 aa12.35□□□□□ -0.43
TCF4-273ENST00000630720 LRRC7Q96NW7 1537 aa12.35□□□□□ -0.43
TCF4-273ENST00000630720 ASXL1Q8IXJ9 1541 aa12.34□□□□□ -0.43
TCF4-273ENST00000630720 POLA2Q14181 598 aa12.34□□□□□ -0.43
TCF4-273ENST00000630720 NWD1Q149M9 1564 aa12.33□□□□□ -0.44
TCF4-273ENST00000630720 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
TCF4-273ENST00000630720 PROSER2Q86WR7 435 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms