RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
SYNGAP1-208ENST00000629380 REC8O95072 547 aa16.09■□□□□ 0.17
SYNGAP1-208ENST00000629380 CWC15Q9P013 229 aaKnown RBP16.09■□□□□ 0.17
SYNGAP1-208ENST00000629380 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
SYNGAP1-208ENST00000629380 CCDC144AA2RUR9 1427 aa16.09■□□□□ 0.17
SYNGAP1-208ENST00000629380 KIF15Q9NS87 1388 aa16.09■□□□□ 0.17
SYNGAP1-208ENST00000629380 PDE3BQ13370 1112 aa16.08■□□□□ 0.17
SYNGAP1-208ENST00000629380 ZRSR2Q15696 482 aaKnown RBP16.08■□□□□ 0.16
SYNGAP1-208ENST00000629380 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
SYNGAP1-208ENST00000629380 MCTP1Q6DN14 999 aa16.07■□□□□ 0.16
SYNGAP1-208ENST00000629380 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
SYNGAP1-208ENST00000629380 HSP90B2PQ58FF3 399 aa16.06■□□□□ 0.16
SYNGAP1-208ENST00000629380 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.06■□□□□ 0.16
SYNGAP1-208ENST00000629380 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
SYNGAP1-208ENST00000629380 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.06■□□□□ 0.16
SYNGAP1-208ENST00000629380 EPS15P42566 896 aa16.06■□□□□ 0.16
SYNGAP1-208ENST00000629380 NOL8Q76FK4 1167 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-208ENST00000629380 NAT10Q9H0A0 1025 aaKnown RBP16.05■□□□□ 0.16
SYNGAP1-208ENST00000629380 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
SYNGAP1-208ENST00000629380 CGNL1Q0VF96 1302 aa16.05■□□□□ 0.16
SYNGAP1-208ENST00000629380 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
SYNGAP1-208ENST00000629380 SLC4A10Q6U841 1118 aa16.04■□□□□ 0.16
SYNGAP1-208ENST00000629380 FOXD1Q16676 465 aa16.04■□□□□ 0.16
SYNGAP1-208ENST00000629380 AMPHP49418 695 aa16.04■□□□□ 0.16
SYNGAP1-208ENST00000629380 WWC1Q8IX03 1113 aa16.03■□□□□ 0.16
SYNGAP1-208ENST00000629380 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-208ENST00000629380 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
SYNGAP1-208ENST00000629380 NEXNQ0ZGT2 675 aa16.03■□□□□ 0.16
SYNGAP1-208ENST00000629380 FBXO3Q9UK99 471 aa16.02■□□□□ 0.16
SYNGAP1-208ENST00000629380 CPLX1O14810 134 aa16.02■□□□□ 0.16
SYNGAP1-208ENST00000629380 RNF20Q5VTR2 975 aa16.02■□□□□ 0.15
SYNGAP1-208ENST00000629380 WASHC2AQ641Q2 1341 aa16.02■□□□□ 0.15
SYNGAP1-208ENST00000629380 VPS37DQ86XT2 251 aa16.02■□□□□ 0.15
SYNGAP1-208ENST00000629380 EVA1CP58658 441 aa16.01■□□□□ 0.15
SYNGAP1-208ENST00000629380 CWC22Q9HCG8 908 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-208ENST00000629380 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
SYNGAP1-208ENST00000629380 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
SYNGAP1-208ENST00000629380 MTERF4Q7Z6M4 381 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-208ENST00000629380 BRMS1Q9HCU9 246 aa16■□□□□ 0.15
SYNGAP1-208ENST00000629380 CENPQQ7L2Z9 268 aaPredicted RBP16■□□□□ 0.15
SYNGAP1-208ENST00000629380 ZNF592Q92610 1267 aa16■□□□□ 0.15
SYNGAP1-208ENST00000629380 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
SYNGAP1-208ENST00000629380 C1orf141Q5JVX7 400 aa16■□□□□ 0.15
SYNGAP1-208ENST00000629380 NAP1L1P55209 391 aaKnown RBP16■□□□□ 0.15
SYNGAP1-208ENST00000629380 CCP110O43303 1012 aa15.99■□□□□ 0.15
SYNGAP1-208ENST00000629380 R3HCC1Q9Y3T6 440 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-208ENST00000629380 TRDNQ13061 729 aa15.99■□□□□ 0.15
SYNGAP1-208ENST00000629380 SAFBQ15424 915 aaKnown RBP eCLIP15.99■□□□□ 0.15
SYNGAP1-208ENST00000629380 POGZQ7Z3K3 1410 aa15.98■□□□□ 0.15
SYNGAP1-208ENST00000629380 DDX49Q9Y6V7 483 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-208ENST00000629380 NLRP13Q86W25 1043 aa15.98■□□□□ 0.15
SYNGAP1-208ENST00000629380 ERICH2A1L162 156 aa15.98■□□□□ 0.15
SYNGAP1-208ENST00000629380 ERCC4Q92889 916 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-208ENST00000629380 EVC2Q86UK5 1308 aa15.98■□□□□ 0.15
SYNGAP1-208ENST00000629380 HSPA5P11021 654 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-208ENST00000629380 MYOM3Q5VTT5 1437 aa15.97■□□□□ 0.15
SYNGAP1-208ENST00000629380 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
SYNGAP1-208ENST00000629380 HSP90AB2PQ58FF8 381 aa15.97■□□□□ 0.15
SYNGAP1-208ENST00000629380 KIF7Q2M1P5 1343 aa15.97■□□□□ 0.15
SYNGAP1-208ENST00000629380 ATF3P18847 181 aa15.96■□□□□ 0.15
SYNGAP1-208ENST00000629380 NINLQ9Y2I6 1382 aa15.96■□□□□ 0.15
SYNGAP1-208ENST00000629380 CAGE1Q8TC20 777 aa15.96■□□□□ 0.15
SYNGAP1-208ENST00000629380 TTC5Q8N0Z6 440 aa15.96■□□□□ 0.15
SYNGAP1-208ENST00000629380 FOXD4L5Q5VV16 416 aaPredicted RBP15.95■□□□□ 0.14
SYNGAP1-208ENST00000629380 FOXD4L4Q8WXT5 416 aaPredicted RBP15.95■□□□□ 0.14
SYNGAP1-208ENST00000629380 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
SYNGAP1-208ENST00000629380 ARHGAP5Q13017 1502 aa15.95■□□□□ 0.14
SYNGAP1-208ENST00000629380 RILPL2Q969X0 211 aa15.95■□□□□ 0.14
SYNGAP1-208ENST00000629380 MNS1Q8NEH6 495 aa15.95■□□□□ 0.14
SYNGAP1-208ENST00000629380 PLEKHH2Q8IVE3 1493 aa15.95■□□□□ 0.14
SYNGAP1-208ENST00000629380 FAM161AQ3B820 660 aa15.94■□□□□ 0.14
SYNGAP1-208ENST00000629380 DHX16O60231 1041 aaKnown RBP15.94■□□□□ 0.14
SYNGAP1-208ENST00000629380 C9orf78Q9NZ63 289 aaPredicted RBP15.94■□□□□ 0.14
SYNGAP1-208ENST00000629380 ANKRD18AQ8IVF6 992 aa15.94■□□□□ 0.14
SYNGAP1-208ENST00000629380 ANO2Q9NQ90 1003 aa15.93■□□□□ 0.14
SYNGAP1-208ENST00000629380 RAB3GAP2Q9H2M9 1393 aa15.93■□□□□ 0.14
SYNGAP1-208ENST00000629380 H0YHG0 523 aa15.93■□□□□ 0.14
SYNGAP1-208ENST00000629380 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
SYNGAP1-208ENST00000629380 NFXL1Q6ZNB6 911 aa15.93■□□□□ 0.14
SYNGAP1-208ENST00000629380 CCDC73Q6ZRK6 1079 aa15.93■□□□□ 0.14
SYNGAP1-208ENST00000629380 BICD2Q8TD16 824 aa15.93■□□□□ 0.14
SYNGAP1-208ENST00000629380 COG3Q96JB2 828 aa15.93■□□□□ 0.14
SYNGAP1-208ENST00000629380 RAD21O60216 631 aa15.92■□□□□ 0.14
SYNGAP1-208ENST00000629380 TXLNBQ8N3L3 684 aa15.92■□□□□ 0.14
SYNGAP1-208ENST00000629380 DHX8Q14562 1220 aaKnown RBP15.92■□□□□ 0.14
SYNGAP1-208ENST00000629380 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
SYNGAP1-208ENST00000629380 APPP05067 770 aa15.92■□□□□ 0.14
SYNGAP1-208ENST00000629380 ERLIN2O94905 339 aa15.91■□□□□ 0.14
SYNGAP1-208ENST00000629380 SASS6Q6UVJ0 657 aa15.91■□□□□ 0.14
SYNGAP1-208ENST00000629380 XBP1P17861 261 aa15.91■□□□□ 0.14
SYNGAP1-208ENST00000629380 WWC2Q6AWC2 1192 aa15.91■□□□□ 0.14
SYNGAP1-208ENST00000629380 OFD1O75665 1012 aa15.91■□□□□ 0.14
SYNGAP1-208ENST00000629380 AQRO60306 1485 aaKnown RBP eCLIP15.9■□□□□ 0.142e-6■■■■■ 31.5
SYNGAP1-208ENST00000629380 INCENPQ9NQS7 918 aa15.9■□□□□ 0.14
SYNGAP1-208ENST00000629380 GOLGA6L10A6NI86 522 aa15.9■□□□□ 0.14
SYNGAP1-208ENST00000629380 MYBBP1AQ9BQG0 1328 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-208ENST00000629380 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-208ENST00000629380 GOLGA6L7A0A1B0GV03 622 aa15.9■□□□□ 0.14
SYNGAP1-208ENST00000629380 IFIT2P09913 472 aaKnown RBP15.89■□□□□ 0.13
SYNGAP1-208ENST00000629380 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms