RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 RRP1P56182 461 aaKnown RBP9.81□□□□□ -0.84
PKP4-217ENST00000628904 ABCC10Q5T3U5 1492 aa9.8□□□□□ -0.84
PKP4-217ENST00000628904 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
PKP4-217ENST00000628904 SLC4A3P48751 1232 aa9.8□□□□□ -0.84
PKP4-217ENST00000628904 ARXQ96QS3 562 aa9.8□□□□□ -0.84
PKP4-217ENST00000628904 ARHGEF12Q9NZN5 1544 aa9.79□□□□□ -0.84
PKP4-217ENST00000628904 NCKAP5LQ9HCH0 1330 aa9.79□□□□□ -0.84
PKP4-217ENST00000628904 LTV1Q96GA3 475 aaPredicted RBP9.79□□□□□ -0.84
PKP4-217ENST00000628904 COG6Q9Y2V7 657 aa9.79□□□□□ -0.84
PKP4-217ENST00000628904 MAPK8IP3Q9UPT6 1336 aa9.79□□□□□ -0.84
PKP4-217ENST00000628904 CABP1Q9NZU7 370 aa9.79□□□□□ -0.84
PKP4-217ENST00000628904 DHX29Q7Z478 1369 aaKnown RBP9.78□□□□□ -0.84
PKP4-217ENST00000628904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.78□□□□□ -0.845e-10■■■■■ 31.4
PKP4-217ENST00000628904 NOS1P29475 1434 aa9.77□□□□□ -0.84
PKP4-217ENST00000628904 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
PKP4-217ENST00000628904 PANK1Q8TE04 598 aa9.77□□□□□ -0.85
PKP4-217ENST00000628904 ZBTB47Q9UFB7 747 aaPredicted RBP9.77□□□□□ -0.85
PKP4-217ENST00000628904 APBB1O00213 710 aa9.77□□□□□ -0.85
PKP4-217ENST00000628904 TSR2Q969E8 191 aaKnown RBP9.77□□□□□ -0.85
PKP4-217ENST00000628904 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.85
PKP4-217ENST00000628904 TTC37Q6PGP7 1564 aa9.77□□□□□ -0.85
PKP4-217ENST00000628904 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.77□□□□□ -0.85
PKP4-217ENST00000628904 PMFBP1Q8TBY8 1022 aa9.77□□□□□ -0.85
PKP4-217ENST00000628904 PRAG1Q86YV5 1406 aa9.77□□□□□ -0.85
PKP4-217ENST00000628904 EIF3AQ14152 1382 aaKnown RBP9.76□□□□□ -0.85
PKP4-217ENST00000628904 FTSJ3Q8IY81 847 aaKnown RBP9.76□□□□□ -0.85
PKP4-217ENST00000628904 ZNF428Q96B54 188 aa9.76□□□□□ -0.85
PKP4-217ENST00000628904 ABCA8O94911 1581 aa9.76□□□□□ -0.85
PKP4-217ENST00000628904 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
PKP4-217ENST00000628904 CHD1O14646 1710 aa9.76□□□□□ -0.85
PKP4-217ENST00000628904 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
PKP4-217ENST00000628904 UGGT1Q9NYU2 1555 aa9.75□□□□□ -0.85
PKP4-217ENST00000628904 A2MP01023 1474 aa9.75□□□□□ -0.85
PKP4-217ENST00000628904 ABCC2Q92887 1545 aa9.75□□□□□ -0.85
PKP4-217ENST00000628904 TCP11L2Q8N4U5 519 aa9.75□□□□□ -0.85
PKP4-217ENST00000628904 THUMPD2Q9BTF0 503 aaKnown RBP9.75□□□□□ -0.85
PKP4-217ENST00000628904 EVC2Q86UK5 1308 aa9.75□□□□□ -0.85
PKP4-217ENST00000628904 SPATA31E1Q6ZUB1 1445 aa9.75□□□□□ -0.85
PKP4-217ENST00000628904 HDGFL2Q7Z4V5 671 aaPredicted RBP9.75□□□□□ -0.85
PKP4-217ENST00000628904 SAMD9LQ8IVG5 1584 aa9.74□□□□□ -0.85
PKP4-217ENST00000628904 ANP32EQ9BTT0 268 aa9.74□□□□□ -0.85
PKP4-217ENST00000628904 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
PKP4-217ENST00000628904 RRS1Q15050 365 aaKnown RBP9.74□□□□□ -0.85
PKP4-217ENST00000628904 BRD4O60885 1362 aaPredicted RBP9.74□□□□□ -0.85
PKP4-217ENST00000628904 WDR7Q9Y4E6 1490 aa9.74□□□□□ -0.85
PKP4-217ENST00000628904 DMRT2Q9Y5R5 561 aa9.74□□□□□ -0.85
PKP4-217ENST00000628904 PLA2R1Q13018 1463 aa9.74□□□□□ -0.85
PKP4-217ENST00000628904 CDK19Q9BWU1 502 aa9.73□□□□□ -0.85
PKP4-217ENST00000628904 KDM5BQ9UGL1 1544 aa9.73□□□□□ -0.85
PKP4-217ENST00000628904 CGNL1Q0VF96 1302 aa9.73□□□□□ -0.85
PKP4-217ENST00000628904 ZRANB1Q9UGI0 708 aa9.73□□□□□ -0.85
PKP4-217ENST00000628904 AMER1Q5JTC6 1135 aaPredicted RBP9.73□□□□□ -0.85
PKP4-217ENST00000628904 ITSN2Q9NZM3 1697 aa9.73□□□□□ -0.85
PKP4-217ENST00000628904 NECTIN2Q92692 538 aa9.72□□□□□ -0.85
PKP4-217ENST00000628904 TERF2IPQ9NYB0 399 aa9.72□□□□□ -0.85
PKP4-217ENST00000628904 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.86
PKP4-217ENST00000628904 TNNQ9UQP3 1299 aa9.71□□□□□ -0.86
PKP4-217ENST00000628904 ITPRIPQ8IWB1 547 aa9.71□□□□□ -0.86
PKP4-217ENST00000628904 NGDNQ8NEJ9 315 aaKnown RBP9.71□□□□□ -0.86
PKP4-217ENST00000628904 ADGRL2O95490 1459 aa9.7□□□□□ -0.86
PKP4-217ENST00000628904 NSD3Q9BZ95 1437 aa9.7□□□□□ -0.86
PKP4-217ENST00000628904 A0A0G2JS52 829 aa9.7□□□□□ -0.86
PKP4-217ENST00000628904 RALGAPBQ86X10 1494 aa9.7□□□□□ -0.86
PKP4-217ENST00000628904 MSH5O43196 834 aa9.7□□□□□ -0.86
PKP4-217ENST00000628904 RIPK4P57078 832 aa9.7□□□□□ -0.86
PKP4-217ENST00000628904 XPCQ01831 940 aaPredicted RBP9.7□□□□□ -0.86
PKP4-217ENST00000628904 GCC2Q8IWJ2 1684 aa9.7□□□□□ -0.86
PKP4-217ENST00000628904 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
PKP4-217ENST00000628904 CDC42BPAQ5VT25 1732 aa9.69□□□□□ -0.86
PKP4-217ENST00000628904 NME9Q86XW9 330 aa9.68□□□□□ -0.86
PKP4-217ENST00000628904 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
PKP4-217ENST00000628904 C14orf93Q9H972 538 aaKnown RBP9.67□□□□□ -0.86
PKP4-217ENST00000628904 NOP58Q9Y2X3 529 aaKnown RBP9.67□□□□□ -0.86
PKP4-217ENST00000628904 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
PKP4-217ENST00000628904 PDE4AP27815 886 aa9.67□□□□□ -0.86
PKP4-217ENST00000628904 PDE3BQ13370 1112 aa9.67□□□□□ -0.86
PKP4-217ENST00000628904 DUOX2Q9NRD8 1548 aa9.67□□□□□ -0.86
PKP4-217ENST00000628904 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
PKP4-217ENST00000628904 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
PKP4-217ENST00000628904 MIS18AQ9NYP9 233 aa9.66□□□□□ -0.86
PKP4-217ENST00000628904 EXOSC9Q06265 439 aaKnown RBP9.65□□□□□ -0.86
PKP4-217ENST00000628904 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
PKP4-217ENST00000628904 C1orf115Q9H7X2 142 aa9.65□□□□□ -0.86
PKP4-217ENST00000628904 PLEKHH1Q9ULM0 1364 aa9.65□□□□□ -0.86
PKP4-217ENST00000628904 SHANK2Q9UPX8 1470 aa9.65□□□□□ -0.86
PKP4-217ENST00000628904 DUSP27Q5VZP5 1158 aa9.65□□□□□ -0.87
PKP4-217ENST00000628904 RUNDC1Q96C34 613 aa9.65□□□□□ -0.87
PKP4-217ENST00000628904 SLC52A1Q9NWF4 448 aa9.65□□□□□ -0.87
PKP4-217ENST00000628904 EID1Q9Y6B2 187 aa9.64□□□□□ -0.87
PKP4-217ENST00000628904 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
PKP4-217ENST00000628904 E9PSI1 815 aa9.64□□□□□ -0.87
PKP4-217ENST00000628904 SLC4A10Q6U841 1118 aa9.64□□□□□ -0.87
PKP4-217ENST00000628904 COG3Q96JB2 828 aa9.64□□□□□ -0.87
PKP4-217ENST00000628904 BCORL1Q5H9F3 1711 aa9.64□□□□□ -0.87
PKP4-217ENST00000628904 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
PKP4-217ENST00000628904 TPRNQ4KMQ1 711 aa9.63□□□□□ -0.87
PKP4-217ENST00000628904 SLKQ9H2G2 1235 aaPredicted RBP9.63□□□□□ -0.87
PKP4-217ENST00000628904 SCAF11Q99590 1463 aaKnown RBP9.63□□□□□ -0.87
PKP4-217ENST00000628904 FAM83GA6ND36 823 aa9.63□□□□□ -0.87
PKP4-217ENST00000628904 AMPHP49418 695 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms