RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 HCSTQ9UBK5 93 aa7.2□□□□□ -1.26
CNOT1-223ENST00000628857 FAM161AQ3B820 660 aa7.19□□□□□ -1.26
CNOT1-223ENST00000628857 RSPH4AQ5TD94 716 aa7.19□□□□□ -1.26
CNOT1-223ENST00000628857 TRIM66O15016 1216 aa7.18□□□□□ -1.26
CNOT1-223ENST00000628857 CLCN1P35523 988 aa7.18□□□□□ -1.26
CNOT1-223ENST00000628857 SWT1Q5T5J6 900 aaKnown RBP7.18□□□□□ -1.26
CNOT1-223ENST00000628857 KCTD12Q96CX2 325 aaKnown RBP7.18□□□□□ -1.26
CNOT1-223ENST00000628857 PHOX2BQ99453 314 aa7.18□□□□□ -1.26
CNOT1-223ENST00000628857 TMUB1Q9BVT8 246 aa7.18□□□□□ -1.26
CNOT1-223ENST00000628857 TSR3Q9UJK0 312 aaKnown RBP7.18□□□□□ -1.26
CNOT1-223ENST00000628857 SULF1Q8IWU6 871 aa7.17□□□□□ -1.26
CNOT1-223ENST00000628857 PPP4CP60510 307 aa7.16□□□□□ -1.26
CNOT1-223ENST00000628857 PRR14Q9BWN1 585 aa7.16□□□□□ -1.26
CNOT1-223ENST00000628857 SLC24A3Q9HC58 644 aa7.16□□□□□ -1.26
CNOT1-223ENST00000628857 GPCPD1Q9NPB8 672 aa7.16□□□□□ -1.26
CNOT1-223ENST00000628857 TPRNQ4KMQ1 711 aa7.15□□□□□ -1.26
CNOT1-223ENST00000628857 HPS5Q9UPZ3 1129 aa7.14□□□□□ -1.27
CNOT1-223ENST00000628857 BCAMP50895 628 aa7.13□□□□□ -1.27
CNOT1-223ENST00000628857 MDM2Q00987 491 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-223ENST00000628857 PDE4DQ08499 809 aa7.12□□□□□ -1.27
CNOT1-223ENST00000628857 WBP1LQ9NX94 342 aa7.12□□□□□ -1.27
CNOT1-223ENST00000628857 FAM217BQ9NTX9 383 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-223ENST00000628857 SLC10A3P09131 477 aa7.1□□□□□ -1.27
CNOT1-223ENST00000628857 CD46P15529 392 aa7.1□□□□□ -1.27
CNOT1-223ENST00000628857 PTPN5P54829 565 aa7.1□□□□□ -1.27
CNOT1-223ENST00000628857 KMT5BQ4FZB7 885 aa7.1□□□□□ -1.27
CNOT1-223ENST00000628857 ACTN4O43707 911 aaKnown RBP7.09□□□□□ -1.27
CNOT1-223ENST00000628857 SSTR3P32745 418 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-223ENST00000628857 GCGRP47871 477 aa7.09□□□□□ -1.27
CNOT1-223ENST00000628857 IFFO2Q5TF58 517 aa7.09□□□□□ -1.27
CNOT1-223ENST00000628857 PARP9Q8IXQ6 854 aa7.09□□□□□ -1.27
CNOT1-223ENST00000628857 REPIN1Q9BWE0 567 aaKnown RBP7.09□□□□□ -1.27
CNOT1-223ENST00000628857 PLSCR2Q9NRY7 297 aa7.09□□□□□ -1.27
CNOT1-223ENST00000628857 DDX11L8A8MPP1 907 aa7.08□□□□□ -1.28
CNOT1-223ENST00000628857 TTLL12Q14166 644 aaPredicted RBP7.08□□□□□ -1.28
CNOT1-223ENST00000628857 GIGYF2Q6Y7W6 1299 aaKnown RBP7.08□□□□□ -1.28
CNOT1-223ENST00000628857 DIXDC1Q155Q3 683 aa7.07□□□□□ -1.28
CNOT1-223ENST00000628857 RNF40O75150 1001 aa7.06□□□□□ -1.28
CNOT1-223ENST00000628857 ITGBL1O95965 494 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-223ENST00000628857 USP46P62068 366 aa7.06□□□□□ -1.28
CNOT1-223ENST00000628857 RDH13Q8NBN7 331 aa7.06□□□□□ -1.28
CNOT1-223ENST00000628857 NLRP7Q8WX94 980 aa7.06□□□□□ -1.28
CNOT1-223ENST00000628857 CFHP08603 1231 aa7.05□□□□□ -1.28
CNOT1-223ENST00000628857 APLP1P51693 650 aa7.05□□□□□ -1.28
CNOT1-223ENST00000628857 GRIPAP1Q4V328 841 aa7.05□□□□□ -1.28
CNOT1-223ENST00000628857 ATP6V1AP38606 617 aa7.04□□□□□ -1.28
CNOT1-223ENST00000628857 KDM4AO75164 1064 aa7.03□□□□□ -1.28
CNOT1-223ENST00000628857 GJA5P36382 358 aa7.03□□□□□ -1.28
CNOT1-223ENST00000628857 SALL2Q9Y467 1007 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-223ENST00000628857 MS4A1P11836 297 aa7.02□□□□□ -1.29
CNOT1-223ENST00000628857 TJAP1Q5JTD0 557 aa7.02□□□□□ -1.29
CNOT1-223ENST00000628857 DDRGK1Q96HY6 314 aa7.02□□□□□ -1.29
CNOT1-223ENST00000628857 IL21Q9HBE4 155 aa7.02□□□□□ -1.29
CNOT1-223ENST00000628857 PCDHB3Q9Y5E6 796 aa7.02□□□□□ -1.29
CNOT1-223ENST00000628857 PRKCSHP14314 528 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-223ENST00000628857 BEGAINQ9BUH8 593 aa7.01□□□□□ -1.29
CNOT1-223ENST00000628857 KDM4CQ9H3R0 1056 aa7.01□□□□□ -1.29
CNOT1-223ENST00000628857 NR1I2O75469 434 aa7□□□□□ -1.29
CNOT1-223ENST00000628857 KCNC4Q03721 635 aa7□□□□□ -1.29
CNOT1-223ENST00000628857 MORN1Q5T089 497 aa7□□□□□ -1.29
CNOT1-223ENST00000628857 NUTM1Q86Y26 1132 aa7□□□□□ -1.29
CNOT1-223ENST00000628857 BRPF1P55201 1214 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-223ENST00000628857 FUT2Q10981 343 aa6.99□□□□□ -1.29
CNOT1-223ENST00000628857 TUSC1Q2TAM9 212 aa6.99□□□□□ -1.29
CNOT1-223ENST00000628857 SPIRE2Q8WWL2 714 aa6.99□□□□□ -1.29
CNOT1-223ENST00000628857 MTRQ99707 1265 aa6.99□□□□□ -1.29
CNOT1-223ENST00000628857 RSPH6AQ9H0K4 717 aa6.99□□□□□ -1.29
CNOT1-223ENST00000628857 ZPR1O75312 459 aa6.98□□□□□ -1.29
CNOT1-223ENST00000628857 SCUBE3Q8IX30 993 aa6.98□□□□□ -1.29
CNOT1-223ENST00000628857 GOPCQ9HD26 462 aa6.98□□□□□ -1.29
CNOT1-223ENST00000628857 HOXA2O43364 376 aa6.97□□□□□ -1.29
CNOT1-223ENST00000628857 NEUROD2Q15784 382 aa6.97□□□□□ -1.29
CNOT1-223ENST00000628857 Q3C1V9 767 aa6.97□□□□□ -1.29
CNOT1-223ENST00000628857 GPBP1L1Q9HC44 474 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-223ENST00000628857 PLA2G2EQ9NZK7 142 aa6.97□□□□□ -1.29
CNOT1-223ENST00000628857 BLOC1S3Q6QNY0 202 aa6.96□□□□□ -1.3
CNOT1-223ENST00000628857 TBC1D2Q9BYX2 928 aa6.96□□□□□ -1.3
CNOT1-223ENST00000628857 SPTLC1O15269 473 aa6.95□□□□□ -1.3
CNOT1-223ENST00000628857 THAP11Q96EK4 314 aa6.95□□□□□ -1.3
CNOT1-223ENST00000628857 SPDYE5A6NIY4 337 aa6.94□□□□□ -1.3
CNOT1-223ENST00000628857 BRICD5Q6PL45 260 aa6.94□□□□□ -1.3
CNOT1-223ENST00000628857 FAM117AQ9C073 453 aa6.94□□□□□ -1.3
CNOT1-223ENST00000628857 SLC27A5Q9Y2P5 690 aa6.94□□□□□ -1.3
CNOT1-223ENST00000628857 FMNL1O95466 1100 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-223ENST00000628857 COPS2P61201 443 aa6.93□□□□□ -1.3
CNOT1-223ENST00000628857 SKIV2LQ15477 1246 aaKnown RBP6.93□□□□□ -1.3
CNOT1-223ENST00000628857 PUS10Q3MIT2 529 aaKnown RBP6.93□□□□□ -1.3
CNOT1-223ENST00000628857 SH3D19Q5HYK7 790 aa6.93□□□□□ -1.3
CNOT1-223ENST00000628857 ZNF516Q92618 1163 aa6.93□□□□□ -1.3
CNOT1-223ENST00000628857 PLEKHG3A1L390 1219 aa6.92□□□□□ -1.3
CNOT1-223ENST00000628857 MOXD2PA6NHM9 499 aa6.92□□□□□ -1.3
CNOT1-223ENST00000628857 ADH1BP00325 375 aa6.92□□□□□ -1.3
CNOT1-223ENST00000628857 FDX1P10109 184 aa6.92□□□□□ -1.3
CNOT1-223ENST00000628857 PRPF38BQ5VTL8 546 aaKnown RBP6.92□□□□□ -1.3
CNOT1-223ENST00000628857 MYSM1Q5VVJ2 828 aa6.92□□□□□ -1.3
CNOT1-223ENST00000628857 RSBN1LQ6PCB5 846 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-223ENST00000628857 RGS20O76081 388 aa6.91□□□□□ -1.3
CNOT1-223ENST00000628857 MSS51Q4VC12 460 aa6.91□□□□□ -1.3
CNOT1-223ENST00000628857 RIC3Q7Z5B4 369 aa6.91□□□□□ -1.3
CNOT1-223ENST00000628857 GGCXP38435 758 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms