RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
RAB5B-211ENST00000628569 ARID4BQ4LE39 1312 aaPredicted RBP18.19■□□□□ 0.5
RAB5B-211ENST00000628569 DDX10Q13206 875 aaKnown RBP18.17■□□□□ 0.5
RAB5B-211ENST00000628569 RPGRIP1LQ68CZ1 1315 aa18.17■□□□□ 0.5
RAB5B-211ENST00000628569 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
RAB5B-211ENST00000628569 TMEM131LA2VDJ0 1609 aa18.16■□□□□ 0.5
RAB5B-211ENST00000628569 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
RAB5B-211ENST00000628569 NEXMIFQ5QGS0 1516 aa18.14■□□□□ 0.49
RAB5B-211ENST00000628569 SETBP1Q9Y6X0 1596 aa18.14■□□□□ 0.49
RAB5B-211ENST00000628569 C11orf95C9JLR9 678 aaPredicted RBP18.13■□□□□ 0.49
RAB5B-211ENST00000628569 NBPF1Q3BBV0 1214 aa18.12■□□□□ 0.49
RAB5B-211ENST00000628569 KIF7Q2M1P5 1343 aa18.12■□□□□ 0.49
RAB5B-211ENST00000628569 ZFYVE9O95405 1425 aa18.12■□□□□ 0.49
RAB5B-211ENST00000628569 PIK3C2GO75747 1445 aa18.11■□□□□ 0.49
RAB5B-211ENST00000628569 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
RAB5B-211ENST00000628569 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
RAB5B-211ENST00000628569 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
RAB5B-211ENST00000628569 IDI1Q13907 227 aa18.08■□□□□ 0.48
RAB5B-211ENST00000628569 MYO3AQ8NEV4 1616 aa18.08■□□□□ 0.48
RAB5B-211ENST00000628569 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
RAB5B-211ENST00000628569 ADGRF5Q8IZF2 1346 aa18.06■□□□□ 0.48
RAB5B-211ENST00000628569 ZMYM3Q14202 1370 aa18.05■□□□□ 0.48
RAB5B-211ENST00000628569 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
RAB5B-211ENST00000628569 FBXO31Q5XUX0 539 aaPredicted RBP18.03■□□□□ 0.48
RAB5B-211ENST00000628569 TESK2Q96S53 571 aa18.03■□□□□ 0.48
RAB5B-211ENST00000628569 FER1L4A9Z1Z3 1794 aa18.02■□□□□ 0.47
RAB5B-211ENST00000628569 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
RAB5B-211ENST00000628569 CHGAP10645 457 aaKnown RBP18.01■□□□□ 0.47
RAB5B-211ENST00000628569 MLECQ14165 292 aa18.01■□□□□ 0.47
RAB5B-211ENST00000628569 C14orf93Q9H972 538 aaKnown RBP18.01■□□□□ 0.47
RAB5B-211ENST00000628569 EIF3AQ14152 1382 aaKnown RBP18.01■□□□□ 0.47
RAB5B-211ENST00000628569 CCER2I3L3R5 266 aa18■□□□□ 0.47
RAB5B-211ENST00000628569 VGFO15240 615 aaPredicted RBP18■□□□□ 0.47
RAB5B-211ENST00000628569 ANP32CO43423 234 aa17.99■□□□□ 0.47
RAB5B-211ENST00000628569 CFAP70Q5T0N1 1121 aa17.99■□□□□ 0.47
RAB5B-211ENST00000628569 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
RAB5B-211ENST00000628569 C3P01024 1663 aa17.99■□□□□ 0.47
RAB5B-211ENST00000628569 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
RAB5B-211ENST00000628569 TNRQ92752 1358 aa17.96■□□□□ 0.47
RAB5B-211ENST00000628569 UBR1Q8IWV7 1749 aa17.96■□□□□ 0.47
RAB5B-211ENST00000628569 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
RAB5B-211ENST00000628569 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
RAB5B-211ENST00000628569 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
RAB5B-211ENST00000628569 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
RAB5B-211ENST00000628569 SETD1AO15047 1707 aaKnown RBP17.93■□□□□ 0.46
RAB5B-211ENST00000628569 TMF1P82094 1093 aa17.93■□□□□ 0.46
RAB5B-211ENST00000628569 QRICH2Q9H0J4 1663 aa17.91■□□□□ 0.46
RAB5B-211ENST00000628569 RIMS2Q9UQ26 1411 aa17.9■□□□□ 0.46
RAB5B-211ENST00000628569 ALKQ9UM73 1620 aa17.9■□□□□ 0.46
RAB5B-211ENST00000628569 MYOM1P52179 1685 aa17.9■□□□□ 0.46
RAB5B-211ENST00000628569 ADAMTSL3P82987 1691 aa17.9■□□□□ 0.46
RAB5B-211ENST00000628569 NRXN3Q9Y4C0 1643 aa17.89■□□□□ 0.45
RAB5B-211ENST00000628569 CDCA8Q53HL2 280 aa17.88■□□□□ 0.45
RAB5B-211ENST00000628569 PRKRIP1Q9H875 184 aaPredicted RBP17.88■□□□□ 0.45
RAB5B-211ENST00000628569 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
RAB5B-211ENST00000628569 STAG3Q9UJ98 1225 aa17.86■□□□□ 0.45
RAB5B-211ENST00000628569 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
RAB5B-211ENST00000628569 CERKQ8TCT0 537 aa17.85■□□□□ 0.45
RAB5B-211ENST00000628569 CENPJQ9HC77 1338 aaPredicted RBP17.85■□□□□ 0.45
RAB5B-211ENST00000628569 DLC1Q96QB1 1528 aa17.84■□□□□ 0.45
RAB5B-211ENST00000628569 PTPRMP28827 1452 aa17.84■□□□□ 0.45
RAB5B-211ENST00000628569 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
RAB5B-211ENST00000628569 RIMS1Q86UR5 1692 aaKnown RBP17.83■□□□□ 0.45
RAB5B-211ENST00000628569 SLIT1O75093 1534 aa17.83■□□□□ 0.45
RAB5B-211ENST00000628569 TMEM2Q9UHN6 1383 aa17.83■□□□□ 0.45
RAB5B-211ENST00000628569 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
RAB5B-211ENST00000628569 KNDC1Q76NI1 1749 aa17.82■□□□□ 0.44
RAB5B-211ENST00000628569 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
RAB5B-211ENST00000628569 YTHDC2Q9H6S0 1430 aaKnown RBP17.81■□□□□ 0.44
RAB5B-211ENST00000628569 PER1O15534 1290 aaPredicted RBP17.81■□□□□ 0.44
RAB5B-211ENST00000628569 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
RAB5B-211ENST00000628569 NUTM2DQ5VT03 806 aaPredicted RBP17.81■□□□□ 0.44
RAB5B-211ENST00000628569 TMEM132EQ6IEE7 984 aa17.8■□□□□ 0.44
RAB5B-211ENST00000628569 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
RAB5B-211ENST00000628569 TRAK1Q9UPV9 953 aa17.79■□□□□ 0.44
RAB5B-211ENST00000628569 ZNF142P52746 1687 aaPredicted RBP17.79■□□□□ 0.44
RAB5B-211ENST00000628569 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.44
RAB5B-211ENST00000628569 CEBPAP49715 358 aaPredicted RBP17.77■□□□□ 0.44
RAB5B-211ENST00000628569 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
RAB5B-211ENST00000628569 LRPPRCP42704 1394 aaKnown RBP17.77■□□□□ 0.43
RAB5B-211ENST00000628569 CEP170BQ9Y4F5 1589 aaPredicted RBP17.76■□□□□ 0.43
RAB5B-211ENST00000628569 PARD3Q8TEW0 1356 aa17.76■□□□□ 0.43
RAB5B-211ENST00000628569 PLEKHG1Q9ULL1 1385 aa17.76■□□□□ 0.43
RAB5B-211ENST00000628569 TECPR2O15040 1411 aa17.75■□□□□ 0.43
RAB5B-211ENST00000628569 RALBP1Q15311 655 aa17.75■□□□□ 0.43
RAB5B-211ENST00000628569 ABCC11Q96J66 1382 aa17.75■□□□□ 0.43
RAB5B-211ENST00000628569 MED14O60244 1454 aa17.75■□□□□ 0.43
RAB5B-211ENST00000628569 CPS1P31327 1500 aa17.74■□□□□ 0.43
RAB5B-211ENST00000628569 PANK3Q9H999 370 aa17.73■□□□□ 0.43
RAB5B-211ENST00000628569 NPC1L1Q9UHC9 1359 aa17.73■□□□□ 0.43
RAB5B-211ENST00000628569 DIP2AQ14689 1571 aa17.73■□□□□ 0.43
RAB5B-211ENST00000628569 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
RAB5B-211ENST00000628569 HSPA2P54652 639 aa17.71■□□□□ 0.43
RAB5B-211ENST00000628569 SIRT1Q96EB6 747 aa17.71■□□□□ 0.43
RAB5B-211ENST00000628569 USP32Q8NFA0 1604 aa17.71■□□□□ 0.43
RAB5B-211ENST00000628569 FAM135BQ49AJ0 1406 aa17.7■□□□□ 0.42
RAB5B-211ENST00000628569 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
RAB5B-211ENST00000628569 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
RAB5B-211ENST00000628569 BRD4O60885 1362 aaPredicted RBP17.68■□□□□ 0.42
RAB5B-211ENST00000628569 NINLQ9Y2I6 1382 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms