RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.33□□□□□ -0.6
LINC01338-201ENST00000627179 GNPATO15228 680 aa11.32□□□□□ -0.6
LINC01338-201ENST00000627179 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
LINC01338-201ENST00000627179 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
LINC01338-201ENST00000627179 GPR37O15354 613 aa11.29□□□□□ -0.6
LINC01338-201ENST00000627179 ZNF516Q92618 1163 aa11.28□□□□□ -0.6
LINC01338-201ENST00000627179 METTL3Q86U44 580 aaKnown RBP11.27□□□□□ -0.61
LINC01338-201ENST00000627179 KMT5BQ4FZB7 885 aa11.26□□□□□ -0.61
LINC01338-201ENST00000627179 PCDHB3Q9Y5E6 796 aa11.26□□□□□ -0.61
LINC01338-201ENST00000627179 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
LINC01338-201ENST00000627179 FECHP22830 423 aa11.25□□□□□ -0.61
LINC01338-201ENST00000627179 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
LINC01338-201ENST00000627179 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
LINC01338-201ENST00000627179 ACTN4O43707 911 aaKnown RBP11.24□□□□□ -0.61
LINC01338-201ENST00000627179 ZPR1O75312 459 aa11.24□□□□□ -0.61
LINC01338-201ENST00000627179 COPS2P61201 443 aa11.24□□□□□ -0.61
LINC01338-201ENST00000627179 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
LINC01338-201ENST00000627179 PPP1R18Q6NYC8 613 aa11.23□□□□□ -0.61
LINC01338-201ENST00000627179 SLC10A3P09131 477 aa11.22□□□□□ -0.61
LINC01338-201ENST00000627179 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
LINC01338-201ENST00000627179 NKX2-3Q8TAU0 364 aa11.21□□□□□ -0.61
LINC01338-201ENST00000627179 CFHP08603 1231 aa11.2□□□□□ -0.62
LINC01338-201ENST00000627179 GGCXP38435 758 aa11.2□□□□□ -0.62
LINC01338-201ENST00000627179 DAXXQ9UER7 740 aaPredicted RBP11.2□□□□□ -0.62
LINC01338-201ENST00000627179 BLOC1S3Q6QNY0 202 aa11.19□□□□□ -0.62
LINC01338-201ENST00000627179 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
LINC01338-201ENST00000627179 PRKD2Q9BZL6 878 aa11.15□□□□□ -0.62
LINC01338-201ENST00000627179 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
LINC01338-201ENST00000627179 NR1I2O75469 434 aa11.14□□□□□ -0.63
LINC01338-201ENST00000627179 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
LINC01338-201ENST00000627179 SULF1Q8IWU6 871 aa11.12□□□□□ -0.63
LINC01338-201ENST00000627179 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
LINC01338-201ENST00000627179 RDH13Q8NBN7 331 aa11.11□□□□□ -0.63
LINC01338-201ENST00000627179 PHOX2BQ99453 314 aa11.11□□□□□ -0.63
LINC01338-201ENST00000627179 DDX11L8A8MPP1 907 aa11.1□□□□□ -0.63
LINC01338-201ENST00000627179 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
LINC01338-201ENST00000627179 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
LINC01338-201ENST00000627179 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
LINC01338-201ENST00000627179 IRF6O14896 467 aa11.08□□□□□ -0.64
LINC01338-201ENST00000627179 TLL1O43897 1013 aa11.07□□□□□ -0.64
LINC01338-201ENST00000627179 ADH1BP00325 375 aa11.07□□□□□ -0.64
LINC01338-201ENST00000627179 GCGRP47871 477 aa11.07□□□□□ -0.64
LINC01338-201ENST00000627179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC01338-201ENST00000627179 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
LINC01338-201ENST00000627179 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
LINC01338-201ENST00000627179 ANKLE1Q8NAG6 615 aa11.05□□□□□ -0.64
LINC01338-201ENST00000627179 ATP6V1AP38606 617 aa11.04□□□□□ -0.64
LINC01338-201ENST00000627179 GFRA3O60609 400 aa11.03□□□□□ -0.64
LINC01338-201ENST00000627179 S1PR4O95977 384 aa11.03□□□□□ -0.64
LINC01338-201ENST00000627179 FUT2Q10981 343 aa11.03□□□□□ -0.64
LINC01338-201ENST00000627179 MORN1Q5T089 497 aa11.03□□□□□ -0.64
LINC01338-201ENST00000627179 SPSB2Q99619 263 aa11.02□□□□□ -0.65
LINC01338-201ENST00000627179 SLC6A16Q9GZN6 736 aa11.02□□□□□ -0.65
LINC01338-201ENST00000627179 Q6ZNB5 142 aa11.01□□□□□ -0.65
LINC01338-201ENST00000627179 SLC19A1P41440 591 aa11□□□□□ -0.65
LINC01338-201ENST00000627179 GRIPAP1Q4V328 841 aa11□□□□□ -0.65
LINC01338-201ENST00000627179 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
LINC01338-201ENST00000627179 NRG2O14511 850 aaPredicted RBP10.99□□□□□ -0.65
LINC01338-201ENST00000627179 CD46P15529 392 aa10.99□□□□□ -0.65
LINC01338-201ENST00000627179 PPEF1O14829 653 aaPredicted RBP10.98□□□□□ -0.65
LINC01338-201ENST00000627179 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
LINC01338-201ENST00000627179 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
LINC01338-201ENST00000627179 THAP11Q96EK4 314 aa10.98□□□□□ -0.65
LINC01338-201ENST00000627179 FMNL1O95466 1100 aaPredicted RBP10.97□□□□□ -0.65
LINC01338-201ENST00000627179 SLC27A5Q9Y2P5 690 aa10.97□□□□□ -0.65
LINC01338-201ENST00000627179 MDM2Q00987 491 aaPredicted RBP10.96□□□□□ -0.65
LINC01338-201ENST00000627179 EMID1Q96A84 441 aaPredicted RBP10.96□□□□□ -0.65
LINC01338-201ENST00000627179 CLCN1P35523 988 aa10.95□□□□□ -0.66
LINC01338-201ENST00000627179 SPRYD7Q5W111 196 aa10.95□□□□□ -0.66
LINC01338-201ENST00000627179 BRICD5Q6PL45 260 aa10.94□□□□□ -0.66
LINC01338-201ENST00000627179 ZNF598Q86UK7 904 aaKnown RBP10.94□□□□□ -0.66
LINC01338-201ENST00000627179 GPCPD1Q9NPB8 672 aa10.94□□□□□ -0.66
LINC01338-201ENST00000627179 PDZRN3Q9UPQ7 1066 aa10.94□□□□□ -0.66
LINC01338-201ENST00000627179 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
LINC01338-201ENST00000627179 KDM4AO75164 1064 aa10.92□□□□□ -0.66
LINC01338-201ENST00000627179 USP46P62068 366 aa10.92□□□□□ -0.66
LINC01338-201ENST00000627179 Q3C1V9 767 aa10.92□□□□□ -0.66
LINC01338-201ENST00000627179 BARGINQ6ZT62 677 aa10.92□□□□□ -0.66
LINC01338-201ENST00000627179 KRI1Q8N9T8 703 aaKnown RBP10.92□□□□□ -0.66
LINC01338-201ENST00000627179 TRAF7Q6Q0C0 670 aa10.91□□□□□ -0.66
LINC01338-201ENST00000627179 FAM160A2Q8N612 972 aaPredicted RBP10.91□□□□□ -0.66
LINC01338-201ENST00000627179 ZMYND10O75800 440 aa10.9□□□□□ -0.66
LINC01338-201ENST00000627179 PRR20EP86478 221 aa10.89□□□□□ -0.67
LINC01338-201ENST00000627179 PRR20CP86479 221 aa10.89□□□□□ -0.67
LINC01338-201ENST00000627179 PRR20DP86480 221 aa10.89□□□□□ -0.67
LINC01338-201ENST00000627179 PRR20BP86481 221 aa10.89□□□□□ -0.67
LINC01338-201ENST00000627179 PRR20AP86496 221 aa10.89□□□□□ -0.67
LINC01338-201ENST00000627179 MSS51Q4VC12 460 aa10.89□□□□□ -0.67
LINC01338-201ENST00000627179 FAM217BQ9NTX9 383 aaPredicted RBP10.89□□□□□ -0.67
LINC01338-201ENST00000627179 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
LINC01338-201ENST00000627179 TRIM67Q6ZTA4 783 aa10.88□□□□□ -0.67
LINC01338-201ENST00000627179 ZC3H15Q8WU90 426 aaKnown RBP10.88□□□□□ -0.67
LINC01338-201ENST00000627179 ZNF697Q5TEC3 545 aa10.87□□□□□ -0.67
LINC01338-201ENST00000627179 RNF19BQ6ZMZ0 732 aa10.87□□□□□ -0.67
LINC01338-201ENST00000627179 RPIAP49247 311 aa10.86□□□□□ -0.67
LINC01338-201ENST00000627179 FCF1Q9Y324 198 aaKnown RBP10.85□□□□□ -0.67
LINC01338-201ENST00000627179 LCE2BO14633 110 aa10.84□□□□□ -0.67
LINC01338-201ENST00000627179 HOXA2O43364 376 aa10.83□□□□□ -0.68
LINC01338-201ENST00000627179 GDF9O60383 454 aa10.83□□□□□ -0.68
LINC01338-201ENST00000627179 CD2BP2O95400 341 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms