RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.52
SMN2-214ENST00000626847 BRD2P25440 801 aaKnown RBP11.77□□□□□ -0.52
SMN2-214ENST00000626847 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.52
SMN2-214ENST00000626847 BARGINQ6ZT62 677 aa11.77□□□□□ -0.53
SMN2-214ENST00000626847 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
SMN2-214ENST00000626847 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
SMN2-214ENST00000626847 FOXK1P85037 733 aa11.76□□□□□ -0.53
SMN2-214ENST00000626847 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
SMN2-214ENST00000626847 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
SMN2-214ENST00000626847 WRNQ14191 1432 aaPredicted RBP eCLIP11.75□□□□□ -0.53
SMN2-214ENST00000626847 KIF21BO75037 1637 aa11.75□□□□□ -0.53
SMN2-214ENST00000626847 BOLA1Q9Y3E2 137 aa11.74□□□□□ -0.53
SMN2-214ENST00000626847 PTPRGP23470 1445 aa11.74□□□□□ -0.53
SMN2-214ENST00000626847 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
SMN2-214ENST00000626847 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
SMN2-214ENST00000626847 PDIA6Q15084 440 aa11.72□□□□□ -0.53
SMN2-214ENST00000626847 IER5LQ5T953 404 aa11.72□□□□□ -0.53
SMN2-214ENST00000626847 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.53
SMN2-214ENST00000626847 EMP3P54852 163 aa11.71□□□□□ -0.53
SMN2-214ENST00000626847 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
SMN2-214ENST00000626847 AK7Q96M32 723 aa11.71□□□□□ -0.53
SMN2-214ENST00000626847 PLCG2P16885 1265 aa11.7□□□□□ -0.54
SMN2-214ENST00000626847 HSPA2P54652 639 aa11.7□□□□□ -0.54
SMN2-214ENST00000626847 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
SMN2-214ENST00000626847 C2orf72A6NCS6 295 aa11.69□□□□□ -0.54
SMN2-214ENST00000626847 MAP3K9P80192 1104 aa11.69□□□□□ -0.54
SMN2-214ENST00000626847 CUL7Q14999 1698 aa11.69□□□□□ -0.54
SMN2-214ENST00000626847 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
SMN2-214ENST00000626847 AAMPQ13685 434 aa11.68□□□□□ -0.54
SMN2-214ENST00000626847 UHRF1BP1LA0JNW5 1464 aa11.67□□□□□ -0.54
SMN2-214ENST00000626847 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
SMN2-214ENST00000626847 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
SMN2-214ENST00000626847 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
SMN2-214ENST00000626847 RSPH4AQ5TD94 716 aa11.65□□□□□ -0.54
SMN2-214ENST00000626847 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
SMN2-214ENST00000626847 TNIKQ9UKE5 1360 aa11.65□□□□□ -0.54
SMN2-214ENST00000626847 UACAQ9BZF9 1416 aa11.63□□□□□ -0.55
SMN2-214ENST00000626847 UPF1Q92900 1129 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMN2-214ENST00000626847 MAGI3Q5TCQ9 1506 aa11.62□□□□□ -0.55
SMN2-214ENST00000626847 KDM5BQ9UGL1 1544 aa11.62□□□□□ -0.55
SMN2-214ENST00000626847 KIF3CO14782 793 aa11.62□□□□□ -0.55
SMN2-214ENST00000626847 MADDQ8WXG6 1647 aa11.61□□□□□ -0.55
SMN2-214ENST00000626847 NUTM2FA1L443 756 aa11.6□□□□□ -0.55
SMN2-214ENST00000626847 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
SMN2-214ENST00000626847 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
SMN2-214ENST00000626847 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
SMN2-214ENST00000626847 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
SMN2-214ENST00000626847 DEKP35659 375 aaKnown RBP11.6□□□□□ -0.55
SMN2-214ENST00000626847 GPBP1L1Q9HC44 474 aaPredicted RBP11.6□□□□□ -0.55
SMN2-214ENST00000626847 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
SMN2-214ENST00000626847 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMN2-214ENST00000626847 WDR7Q9Y4E6 1490 aa11.58□□□□□ -0.56
SMN2-214ENST00000626847 TBC1D12O60347 775 aa11.58□□□□□ -0.56
SMN2-214ENST00000626847 CDK11BP21127 795 aaKnown RBP11.58□□□□□ -0.56
SMN2-214ENST00000626847 CCDC136Q96JN2 1154 aa11.58□□□□□ -0.56
SMN2-214ENST00000626847 YTHDC1Q96MU7 727 aaKnown RBP11.58□□□□□ -0.56
SMN2-214ENST00000626847 ZCCHC11Q5TAX3 1644 aaKnown RBP11.58□□□□□ -0.56
SMN2-214ENST00000626847 BIVM-ERCC5R4GMW8 1640 aa11.58□□□□□ -0.56
SMN2-214ENST00000626847 CARMIL2Q6F5E8 1435 aa11.58□□□□□ -0.56
SMN2-214ENST00000626847 FAM205CA6NFA0 338 aa11.57□□□□□ -0.56
SMN2-214ENST00000626847 TRIM66O15016 1216 aa11.57□□□□□ -0.56
SMN2-214ENST00000626847 ZMYND15Q9H091 742 aa11.56□□□□□ -0.56
SMN2-214ENST00000626847 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
SMN2-214ENST00000626847 PDE4DQ08499 809 aa11.55□□□□□ -0.56
SMN2-214ENST00000626847 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
SMN2-214ENST00000626847 KDM4CQ9H3R0 1056 aa11.55□□□□□ -0.56
SMN2-214ENST00000626847 RBM10P98175 930 aaKnown RBP11.54□□□□□ -0.56
SMN2-214ENST00000626847 RIMS1Q86UR5 1692 aaKnown RBP11.54□□□□□ -0.56
SMN2-214ENST00000626847 CFAP43Q8NDM7 1665 aa11.54□□□□□ -0.56
SMN2-214ENST00000626847 ARID4BQ4LE39 1312 aaPredicted RBP11.54□□□□□ -0.56
SMN2-214ENST00000626847 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
SMN2-214ENST00000626847 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
SMN2-214ENST00000626847 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
SMN2-214ENST00000626847 DDX12PQ92771 950 aa11.53□□□□□ -0.56
SMN2-214ENST00000626847 ZNF316A6NFI3 1004 aaPredicted RBP11.52□□□□□ -0.56
SMN2-214ENST00000626847 TMEM92Q6UXU6 159 aa11.52□□□□□ -0.56
SMN2-214ENST00000626847 OXER1Q8TDS5 423 aa11.52□□□□□ -0.56
SMN2-214ENST00000626847 MINK1Q8N4C8 1332 aaPredicted RBP11.52□□□□□ -0.57
SMN2-214ENST00000626847 GPR37O15354 613 aa11.51□□□□□ -0.57
SMN2-214ENST00000626847 OSBPP22059 807 aa11.5□□□□□ -0.57
SMN2-214ENST00000626847 CCER1Q8TC90 406 aaPredicted RBP11.5□□□□□ -0.57
SMN2-214ENST00000626847 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
SMN2-214ENST00000626847 EVI5O60447 810 aa11.49□□□□□ -0.57
SMN2-214ENST00000626847 FCHSD2O94868 740 aa11.49□□□□□ -0.57
SMN2-214ENST00000626847 PTGER2P43116 358 aa11.49□□□□□ -0.57
SMN2-214ENST00000626847 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
SMN2-214ENST00000626847 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
SMN2-214ENST00000626847 YEATS2Q9ULM3 1422 aa11.49□□□□□ -0.57
SMN2-214ENST00000626847 DISP1Q96F81 1524 aa11.48□□□□□ -0.57
SMN2-214ENST00000626847 GNPATO15228 680 aa11.48□□□□□ -0.57
SMN2-214ENST00000626847 RAPGEF3O95398 923 aa11.48□□□□□ -0.57
SMN2-214ENST00000626847 NAP1L5Q96NT1 182 aaPredicted RBP11.48□□□□□ -0.57
SMN2-214ENST00000626847 FANCIQ9NVI1 1328 aa11.48□□□□□ -0.57
SMN2-214ENST00000626847 IGF1RP08069 1367 aa11.47□□□□□ -0.57
SMN2-214ENST00000626847 HIC1Q14526 733 aa11.47□□□□□ -0.57
SMN2-214ENST00000626847 DIEXFQ68CQ4 756 aaKnown RBP11.46□□□□□ -0.57
SMN2-214ENST00000626847 CCDC102AQ96A19 550 aa11.46□□□□□ -0.57
SMN2-214ENST00000626847 STRCQ7RTU9 1775 aa11.45□□□□□ -0.58
SMN2-214ENST00000626847 IRF6O14896 467 aa11.45□□□□□ -0.58
SMN2-214ENST00000626847 IQSEC2Q5JU85 1478 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms