RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	ZPR1	O75312	459 aa		13.06	□□□□□ -0.32
NRXN1-223	ENST00000625891	GGCX	P38435	758 aa		13.05	□□□□□ -0.32
NRXN1-223	ENST00000625891	PTGDR	Q13258	359 aa		13.05	□□□□□ -0.32
NRXN1-223	ENST00000625891	TMUB1	Q9BVT8	246 aa		13.04	□□□□□ -0.32
NRXN1-223	ENST00000625891	PRR14	Q9BWN1	585 aa		13.04	□□□□□ -0.32
NRXN1-223	ENST00000625891	DNAJB2	P25686	324 aa		13.02	□□□□□ -0.33
NRXN1-223	ENST00000625891	PCDHB3	Q9Y5E6	796 aa		13.02	□□□□□ -0.33
NRXN1-223	ENST00000625891	SEMA3E	O15041	775 aa		13	□□□□□ -0.33
NRXN1-223	ENST00000625891	RBM46	Q8TBY0	533 aa	Known RBP	13	□□□□□ -0.33
NRXN1-223	ENST00000625891	PDZRN3	Q9UPQ7	1066 aa		13	□□□□□ -0.33
NRXN1-223	ENST00000625891	ADGRG1	Q9Y653	693 aa		13	□□□□□ -0.33
NRXN1-223	ENST00000625891	BLOC1S3	Q6QNY0	202 aa		12.99	□□□□□ -0.33
NRXN1-223	ENST00000625891	TMEM134	Q9H6X4	195 aa		12.99	□□□□□ -0.33
NRXN1-223	ENST00000625891	TESPA1	A2RU30	521 aa	Predicted RBP	12.98	□□□□□ -0.33
NRXN1-223	ENST00000625891	NUTM2F	A1L443	756 aa		12.95	□□□□□ -0.34
NRXN1-223	ENST00000625891	RCCD1	A6NED2	376 aa		12.94	□□□□□ -0.34
NRXN1-223	ENST00000625891	RNF223	E7ERA6	249 aa		12.94	□□□□□ -0.34
NRXN1-223	ENST00000625891	FAM161A	Q3B820	660 aa		12.94	□□□□□ -0.34
NRXN1-223	ENST00000625891	ACTN4	O43707	911 aa	Known RBP	12.92	□□□□□ -0.34
NRXN1-223	ENST00000625891	TLL1	O43897	1013 aa		12.92	□□□□□ -0.34
NRXN1-223	ENST00000625891	EMID1	Q96A84	441 aa	Predicted RBP	12.92	□□□□□ -0.34
NRXN1-223	ENST00000625891	KMT5B	Q4FZB7	885 aa		12.91	□□□□□ -0.34
NRXN1-223	ENST00000625891	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
NRXN1-223	ENST00000625891	SLC19A1	P41440	591 aa		12.9	□□□□□ -0.34
NRXN1-223	ENST00000625891	CFH	P08603	1231 aa		12.89	□□□□□ -0.35
NRXN1-223	ENST00000625891	PRKCSH	P14314	528 aa	Predicted RBP	12.89	□□□□□ -0.35
NRXN1-223	ENST00000625891	TRIM67	Q6ZTA4	783 aa		12.89	□□□□□ -0.35
NRXN1-223	ENST00000625891	FCHSD2	O94868	740 aa		12.88	□□□□□ -0.35
NRXN1-223	ENST00000625891	TPRN	Q4KMQ1	711 aa		12.88	□□□□□ -0.35
NRXN1-223	ENST00000625891	SLC10A3	P09131	477 aa		12.87	□□□□□ -0.35
NRXN1-223	ENST00000625891	ANKLE1	Q8NAG6	615 aa		12.87	□□□□□ -0.35
NRXN1-223	ENST00000625891	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.86	□□□□□ -0.35
NRXN1-223	ENST00000625891	LMOD2	Q6P5Q4	547 aa		12.86	□□□□□ -0.35
NRXN1-223	ENST00000625891	SPRYD7	Q5W111	196 aa		12.85	□□□□□ -0.35
NRXN1-223	ENST00000625891	PPEF1	O14829	653 aa	Predicted RBP	12.84	□□□□□ -0.35
NRXN1-223	ENST00000625891	S1PR4	O95977	384 aa		12.84	□□□□□ -0.35
NRXN1-223	ENST00000625891	ZNF787	Q6DD87	383 aa		12.84	□□□□□ -0.35
NRXN1-223	ENST00000625891	PXYLP1	Q8TE99	480 aa		12.83	□□□□□ -0.36
NRXN1-223	ENST00000625891	OAT	P04181	439 aa		12.82	□□□□□ -0.36
NRXN1-223	ENST00000625891	LIAT1	Q6ZQX7	453 aa		12.82	□□□□□ -0.36
NRXN1-223	ENST00000625891	ZNF598	Q86UK7	904 aa	Known RBP	12.82	□□□□□ -0.36
NRXN1-223	ENST00000625891	NR1I2	O75469	434 aa		12.81	□□□□□ -0.36
NRXN1-223	ENST00000625891	ADH1B	P00325	375 aa		12.81	□□□□□ -0.36
NRXN1-223	ENST00000625891	SMYD5	Q6GMV2	418 aa		12.8	□□□□□ -0.36
NRXN1-223	ENST00000625891	TULP1	O00294	542 aa	Predicted RBP	12.79	□□□□□ -0.36
NRXN1-223	ENST00000625891	PRR20E	P86478	221 aa		12.79	□□□□□ -0.36
NRXN1-223	ENST00000625891	PRR20C	P86479	221 aa		12.79	□□□□□ -0.36
NRXN1-223	ENST00000625891	PRR20D	P86480	221 aa		12.79	□□□□□ -0.36
NRXN1-223	ENST00000625891	PRR20B	P86481	221 aa		12.79	□□□□□ -0.36
NRXN1-223	ENST00000625891	PRR20A	P86496	221 aa		12.79	□□□□□ -0.36
NRXN1-223	ENST00000625891	HIC1	Q14526	733 aa		12.77	□□□□□ -0.37
NRXN1-223	ENST00000625891	METTL3	Q86U44	580 aa	Known RBP	12.77	□□□□□ -0.37
NRXN1-223	ENST00000625891	SCUBE3	Q8IX30	993 aa		12.77	□□□□□ -0.37
NRXN1-223	ENST00000625891	ZNF697	Q5TEC3	545 aa		12.76	□□□□□ -0.37
NRXN1-223	ENST00000625891	SLC6A16	Q9GZN6	736 aa		12.76	□□□□□ -0.37
NRXN1-223	ENST00000625891	DGAT1	O75907	488 aa		12.75	□□□□□ -0.37
NRXN1-223	ENST00000625891	PKDCC	Q504Y2	493 aa		12.75	□□□□□ -0.37
NRXN1-223	ENST00000625891	MYT1	Q01538	1121 aa		12.74	□□□□□ -0.37
NRXN1-223	ENST00000625891	RBM26	Q5T8P6	1007 aa	Known RBP	12.74	□□□□□ -0.37
NRXN1-223	ENST00000625891	RSPH4A	Q5TD94	716 aa		12.74	□□□□□ -0.37
NRXN1-223	ENST00000625891	GDF9	O60383	454 aa		12.73	□□□□□ -0.37
NRXN1-223	ENST00000625891	PUS10	Q3MIT2	529 aa	Known RBP	12.73	□□□□□ -0.37
NRXN1-223	ENST00000625891	PLA2G2C	Q5R387	149 aa		12.73	□□□□□ -0.37
NRXN1-223	ENST00000625891	FECH	P22830	423 aa		12.7	□□□□□ -0.38
NRXN1-223	ENST00000625891	ZC3H15	Q8WU90	426 aa	Known RBP	12.7	□□□□□ -0.38
NRXN1-223	ENST00000625891	ZNF775	Q96BV0	537 aa	Predicted RBP	12.7	□□□□□ -0.38
NRXN1-223	ENST00000625891	SPSB2	Q99619	263 aa		12.7	□□□□□ -0.38
NRXN1-223	ENST00000625891	TNFRSF10A	O00220	468 aa		12.69	□□□□□ -0.38
NRXN1-223	ENST00000625891	GNPAT	O15228	680 aa		12.68	□□□□□ -0.38
NRXN1-223	ENST00000625891	DAXX	Q9UER7	740 aa	Predicted RBP	12.68	□□□□□ -0.38
NRXN1-223	ENST00000625891	FAM187A	A6NFU0	413 aa		12.66	□□□□□ -0.38
NRXN1-223	ENST00000625891	GPR37	O15354	613 aa		12.66	□□□□□ -0.38
NRXN1-223	ENST00000625891	MORN1	Q5T089	497 aa		12.65	□□□□□ -0.38
NRXN1-223	ENST00000625891	RDH13	Q8NBN7	331 aa		12.64	□□□□□ -0.39
NRXN1-223	ENST00000625891	POTEC	B2RU33	542 aa		12.63	□□□□□ -0.39
NRXN1-223	ENST00000625891	GPIHBP1	Q8IV16	184 aa		12.63	□□□□□ -0.39
NRXN1-223	ENST00000625891	THAP11	Q96EK4	314 aa		12.63	□□□□□ -0.39
NRXN1-223	ENST00000625891	PKD2L1	Q9P0L9	805 aa		12.63	□□□□□ -0.39
NRXN1-223	ENST00000625891	ZMYND10	O75800	440 aa		12.62	□□□□□ -0.39
NRXN1-223	ENST00000625891	FUT2	Q10981	343 aa		12.62	□□□□□ -0.39
NRXN1-223	ENST00000625891	DDX11L8	A8MPP1	907 aa		12.61	□□□□□ -0.39
NRXN1-223	ENST00000625891	NLRP7	Q8WX94	980 aa		12.61	□□□□□ -0.39
NRXN1-223	ENST00000625891	ATP6V1A	P38606	617 aa		12.6	□□□□□ -0.39
NRXN1-223	ENST00000625891	RPIA	P49247	311 aa		12.6	□□□□□ -0.39
NRXN1-223	ENST00000625891	GCGR	P47871	477 aa		12.59	□□□□□ -0.39
NRXN1-223	ENST00000625891	FOXC1	Q12948	553 aa		12.59	□□□□□ -0.39
NRXN1-223	ENST00000625891	FAM160A2	Q8N612	972 aa	Predicted RBP	12.59	□□□□□ -0.39
NRXN1-223	ENST00000625891	PHOX2B	Q99453	314 aa		12.58	□□□□□ -0.4
NRXN1-223	ENST00000625891	SLC27A5	Q9Y2P5	690 aa		12.58	□□□□□ -0.4
NRXN1-223	ENST00000625891	FMNL1	O95466	1100 aa	Predicted RBP	12.57	□□□□□ -0.4
NRXN1-223	ENST00000625891	AAAS	Q9NRG9	546 aa		12.57	□□□□□ -0.4
NRXN1-223	ENST00000625891	FCF1	Q9Y324	198 aa	Known RBP	12.57	□□□□□ -0.4
NRXN1-223	ENST00000625891	ST8SIA5	O15466	376 aa		12.56	□□□□□ -0.4
NRXN1-223	ENST00000625891	BARGIN	Q6ZT62	677 aa		12.56	□□□□□ -0.4
NRXN1-223	ENST00000625891	SULF1	Q8IWU6	871 aa		12.56	□□□□□ -0.4
NRXN1-223	ENST00000625891	SALL2	Q9Y467	1007 aa	Predicted RBP	12.56	□□□□□ -0.4
NRXN1-223	ENST00000625891	CD2BP2	O95400	341 aa	Known RBP	12.54	□□□□□ -0.4
NRXN1-223	ENST00000625891	BRICD5	Q6PL45	260 aa		12.53	□□□□□ -0.4
NRXN1-223	ENST00000625891	PRDM9	Q9NQV7	894 aa		12.52	□□□□□ -0.41
NRXN1-223	ENST00000625891	TOR4A	Q9NXH8	423 aa		12.52	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms