RNA–Protein interactions for RNA: ENST00000624680.1

AP003499.3-201, humanhuman

BASIC

Gene AP003499.3, Length 857 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003499.3-201ENST00000624680 PTPRTO14522 1441 aa13.19□□□□□ -0.3
AP003499.3-201ENST00000624680 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
AP003499.3-201ENST00000624680 PLXNC1O60486 1568 aa13.18□□□□□ -0.3
AP003499.3-201ENST00000624680 DHX29Q7Z478 1369 aaKnown RBP13.18□□□□□ -0.3
AP003499.3-201ENST00000624680 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
AP003499.3-201ENST00000624680 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
AP003499.3-201ENST00000624680 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
AP003499.3-201ENST00000624680 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
AP003499.3-201ENST00000624680 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
AP003499.3-201ENST00000624680 NCOA1Q15788 1441 aa13.15□□□□□ -0.3
AP003499.3-201ENST00000624680 PTPRKQ15262 1439 aa13.14□□□□□ -0.31
AP003499.3-201ENST00000624680 VPS8Q8N3P4 1428 aa13.14□□□□□ -0.31
AP003499.3-201ENST00000624680 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
AP003499.3-201ENST00000624680 CLCN6P51797 869 aa13.14□□□□□ -0.31
AP003499.3-201ENST00000624680 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
AP003499.3-201ENST00000624680 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
AP003499.3-201ENST00000624680 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
AP003499.3-201ENST00000624680 KANK4Q5T7N3 995 aaPredicted RBP13.13□□□□□ -0.31
AP003499.3-201ENST00000624680 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
AP003499.3-201ENST00000624680 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
AP003499.3-201ENST00000624680 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
AP003499.3-201ENST00000624680 ZNF142P52746 1687 aaPredicted RBP13.09□□□□□ -0.31
AP003499.3-201ENST00000624680 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
AP003499.3-201ENST00000624680 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
AP003499.3-201ENST00000624680 CFAP65Q6ZU64 1925 aaKnown RBP13.09□□□□□ -0.31
AP003499.3-201ENST00000624680 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
AP003499.3-201ENST00000624680 TNRQ92752 1358 aa13.08□□□□□ -0.31
AP003499.3-201ENST00000624680 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
AP003499.3-201ENST00000624680 LTBP4Q8N2S1 1624 aa13.08□□□□□ -0.32
AP003499.3-201ENST00000624680 PAXIP1Q6ZW49 1069 aaPredicted RBP13.07□□□□□ -0.32
AP003499.3-201ENST00000624680 THEMISQ8N1K5 641 aaPredicted RBP13.07□□□□□ -0.32
AP003499.3-201ENST00000624680 A2ML1A8K2U0 1454 aa13.07□□□□□ -0.32
AP003499.3-201ENST00000624680 PLA2R1Q13018 1463 aa13.07□□□□□ -0.32
AP003499.3-201ENST00000624680 KDM5DQ9BY66 1539 aa13.07□□□□□ -0.32
AP003499.3-201ENST00000624680 DNMT1P26358 1616 aaKnown RBP13.06□□□□□ -0.32
AP003499.3-201ENST00000624680 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
AP003499.3-201ENST00000624680 GABBR2O75899 941 aa13.06□□□□□ -0.32
AP003499.3-201ENST00000624680 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
AP003499.3-201ENST00000624680 MAP3K1Q13233 1512 aa13.06□□□□□ -0.32
AP003499.3-201ENST00000624680 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
AP003499.3-201ENST00000624680 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
AP003499.3-201ENST00000624680 TIE1P35590 1138 aa13.05□□□□□ -0.32
AP003499.3-201ENST00000624680 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
AP003499.3-201ENST00000624680 CFAP44Q96MT7 982 aa13.05□□□□□ -0.32
AP003499.3-201ENST00000624680 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
AP003499.3-201ENST00000624680 PZPP20742 1482 aa13.04□□□□□ -0.32
AP003499.3-201ENST00000624680 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
AP003499.3-201ENST00000624680 DISP3Q9P2K9 1392 aa13.04□□□□□ -0.32
AP003499.3-201ENST00000624680 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
AP003499.3-201ENST00000624680 IQSEC2Q5JU85 1478 aa13.04□□□□□ -0.32
AP003499.3-201ENST00000624680 BMP2KQ9NSY1 1161 aaPredicted RBP13.03□□□□□ -0.32
AP003499.3-201ENST00000624680 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
AP003499.3-201ENST00000624680 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
AP003499.3-201ENST00000624680 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
AP003499.3-201ENST00000624680 RRP7BPQ9NSQ0 103 aa13.02□□□□□ -0.33
AP003499.3-201ENST00000624680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.02□□□□□ -0.33
AP003499.3-201ENST00000624680 POLR1AO95602 1720 aaPredicted RBP13.02□□□□□ -0.33
AP003499.3-201ENST00000624680 UGGT1Q9NYU2 1555 aa13□□□□□ -0.33
AP003499.3-201ENST00000624680 NLRP1Q9C000 1473 aa12.99□□□□□ -0.33
AP003499.3-201ENST00000624680 EFCAB3Q8N7B9 438 aa12.99□□□□□ -0.33
AP003499.3-201ENST00000624680 CHIC2Q9UKJ5 165 aa12.99□□□□□ -0.33
AP003499.3-201ENST00000624680 CEP152O94986 1710 aa12.99□□□□□ -0.33
AP003499.3-201ENST00000624680 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
AP003499.3-201ENST00000624680 EIF2AK4Q9P2K8 1649 aaKnown RBP12.99□□□□□ -0.33
AP003499.3-201ENST00000624680 DUOX2Q9NRD8 1548 aa12.98□□□□□ -0.33
AP003499.3-201ENST00000624680 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
AP003499.3-201ENST00000624680 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
AP003499.3-201ENST00000624680 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
AP003499.3-201ENST00000624680 PTPN23Q9H3S7 1636 aa12.98□□□□□ -0.33
AP003499.3-201ENST00000624680 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
AP003499.3-201ENST00000624680 ABCC3O15438 1527 aa12.97□□□□□ -0.33
AP003499.3-201ENST00000624680 KIF15Q9NS87 1388 aa12.96□□□□□ -0.33
AP003499.3-201ENST00000624680 TOM1O60784 492 aa12.96□□□□□ -0.33
AP003499.3-201ENST00000624680 ABCC5O15440 1437 aa12.96□□□□□ -0.34
AP003499.3-201ENST00000624680 NPHP4O75161 1426 aaPredicted RBP12.96□□□□□ -0.34
AP003499.3-201ENST00000624680 KANK1Q14678 1352 aa12.95□□□□□ -0.34
AP003499.3-201ENST00000624680 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
AP003499.3-201ENST00000624680 FAM50AQ14320 339 aaKnown RBP12.95□□□□□ -0.34
AP003499.3-201ENST00000624680 SHANK2Q9UPX8 1470 aa12.95□□□□□ -0.34
AP003499.3-201ENST00000624680 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
AP003499.3-201ENST00000624680 MFRPQ9BY79 579 aa12.94□□□□□ -0.34
AP003499.3-201ENST00000624680 DAPK1P53355 1430 aa12.94□□□□□ -0.34
AP003499.3-201ENST00000624680 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
AP003499.3-201ENST00000624680 CROCC2H7BZ55 1655 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 ERVK-7P63135 1459 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 SOX12O15370 315 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 TXNDC2Q86VQ3 553 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 RYDENQ9NUL5 291 aaKnown RBP12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 FGD6Q6ZV73 1430 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 SPATA31D1Q6ZQQ2 1576 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 ANKRD30AQ9BXX3 1397 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 CPS1P31327 1500 aa12.93□□□□□ -0.34
AP003499.3-201ENST00000624680 ATN1P54259 1190 aaPredicted RBP12.92□□□□□ -0.34
AP003499.3-201ENST00000624680 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
AP003499.3-201ENST00000624680 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
AP003499.3-201ENST00000624680 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
AP003499.3-201ENST00000624680 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms