RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 DIP2AQ14689 1571 aa11.66□□□□□ -0.54
LINC00963-218ENST00000624138 ADGRB3O60242 1522 aa11.65□□□□□ -0.54
LINC00963-218ENST00000624138 MEX3CQ5U5Q3 659 aaKnown RBP11.65□□□□□ -0.54
LINC00963-218ENST00000624138 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.55
LINC00963-218ENST00000624138 ERBINQ96RT1 1412 aa11.64□□□□□ -0.55
LINC00963-218ENST00000624138 GCC2Q8IWJ2 1684 aa11.63□□□□□ -0.55
LINC00963-218ENST00000624138 NOS1P29475 1434 aa11.62□□□□□ -0.55
LINC00963-218ENST00000624138 SRCAPQ6ZRS2 3230 aa11.62□□□□□ -0.55
LINC00963-218ENST00000624138 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
LINC00963-218ENST00000624138 KIF15Q9NS87 1388 aa11.61□□□□□ -0.55
LINC00963-218ENST00000624138 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
LINC00963-218ENST00000624138 NHSL1Q5SYE7 1610 aa11.6□□□□□ -0.55
LINC00963-218ENST00000624138 KANK1Q14678 1352 aa11.6□□□□□ -0.55
LINC00963-218ENST00000624138 PLEKHG1Q9ULL1 1385 aa11.6□□□□□ -0.55
LINC00963-218ENST00000624138 TMEM131LA2VDJ0 1609 aa11.6□□□□□ -0.55
LINC00963-218ENST00000624138 CADPS2Q86UW7 1296 aa11.59□□□□□ -0.55
LINC00963-218ENST00000624138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC00963-218ENST00000624138 SLC52A1Q9NWF4 448 aa11.59□□□□□ -0.55
LINC00963-218ENST00000624138 TBX22Q9Y458 520 aa11.59□□□□□ -0.55
LINC00963-218ENST00000624138 RGS12O14924 1447 aa11.59□□□□□ -0.55
LINC00963-218ENST00000624138 AFF2P51816 1311 aa11.59□□□□□ -0.55
LINC00963-218ENST00000624138 BCANQ96GW7 911 aa11.58□□□□□ -0.56
LINC00963-218ENST00000624138 C19orf44Q9H6X5 657 aa11.58□□□□□ -0.56
LINC00963-218ENST00000624138 RBM6P78332 1123 aaKnown RBP11.57□□□□□ -0.56
LINC00963-218ENST00000624138 RRP7BPQ9NSQ0 103 aa11.57□□□□□ -0.56
LINC00963-218ENST00000624138 ABCC5O15440 1437 aa11.57□□□□□ -0.56
LINC00963-218ENST00000624138 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
LINC00963-218ENST00000624138 NUTM2BA6NNL0 878 aaPredicted RBP11.56□□□□□ -0.56
LINC00963-218ENST00000624138 NUTM2EB1AL46 878 aaPredicted RBP11.56□□□□□ -0.56
LINC00963-218ENST00000624138 BRINP3Q76B58 766 aa11.56□□□□□ -0.56
LINC00963-218ENST00000624138 NUTM2AQ8IVF1 878 aaPredicted RBP11.56□□□□□ -0.56
LINC00963-218ENST00000624138 PIK3R4Q99570 1358 aa11.55□□□□□ -0.56
LINC00963-218ENST00000624138 RIMS2Q9UQ26 1411 aa11.55□□□□□ -0.56
LINC00963-218ENST00000624138 ATF3P18847 181 aa11.55□□□□□ -0.56
LINC00963-218ENST00000624138 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
LINC00963-218ENST00000624138 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
LINC00963-218ENST00000624138 PTPN23Q9H3S7 1636 aa11.55□□□□□ -0.56
LINC00963-218ENST00000624138 ADAMTS13Q76LX8 1427 aa11.54□□□□□ -0.56
LINC00963-218ENST00000624138 RPRD2Q5VT52 1461 aaKnown RBP11.54□□□□□ -0.56
LINC00963-218ENST00000624138 ASXL1Q8IXJ9 1541 aa11.54□□□□□ -0.56
LINC00963-218ENST00000624138 C14orf37Q86TY3 774 aa11.53□□□□□ -0.56
LINC00963-218ENST00000624138 SETBP1Q9Y6X0 1596 aa11.53□□□□□ -0.56
LINC00963-218ENST00000624138 DCCP43146 1447 aa11.52□□□□□ -0.56
LINC00963-218ENST00000624138 NUTM2DQ5VT03 806 aaPredicted RBP11.52□□□□□ -0.57
LINC00963-218ENST00000624138 ATAD2Q6PL18 1390 aa11.52□□□□□ -0.57
LINC00963-218ENST00000624138 DAPK1P53355 1430 aa11.52□□□□□ -0.57
LINC00963-218ENST00000624138 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-218ENST00000624138 FOXD1Q16676 465 aa11.51□□□□□ -0.57
LINC00963-218ENST00000624138 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-218ENST00000624138 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC00963-218ENST00000624138 LRRC59Q96AG4 307 aaKnown RBP11.51□□□□□ -0.57
LINC00963-218ENST00000624138 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
LINC00963-218ENST00000624138 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
LINC00963-218ENST00000624138 TRPM2O94759 1503 aa11.5□□□□□ -0.57
LINC00963-218ENST00000624138 LAMC1P11047 1609 aa11.5□□□□□ -0.57
LINC00963-218ENST00000624138 MARF1Q9Y4F3 1742 aaKnown RBP11.5□□□□□ -0.57
LINC00963-218ENST00000624138 C8orf37Q96NL8 207 aa11.5□□□□□ -0.57
LINC00963-218ENST00000624138 MST1RQ04912 1400 aa11.5□□□□□ -0.57
LINC00963-218ENST00000624138 PTPRUQ92729 1446 aa11.5□□□□□ -0.57
LINC00963-218ENST00000624138 EP400Q96L91 3159 aa11.5□□□□□ -0.57
LINC00963-218ENST00000624138 UNC13BO14795 1591 aa11.5□□□□□ -0.57
LINC00963-218ENST00000624138 NGLY1Q96IV0 654 aa11.49□□□□□ -0.57
LINC00963-218ENST00000624138 PNPLA6Q8IY17 1366 aa11.49□□□□□ -0.57
LINC00963-218ENST00000624138 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
LINC00963-218ENST00000624138 AMOTL2Q9Y2J4 779 aa11.48□□□□□ -0.57
LINC00963-218ENST00000624138 VPS8Q8N3P4 1428 aa11.48□□□□□ -0.57
LINC00963-218ENST00000624138 NRXN3Q9Y4C0 1643 aa11.48□□□□□ -0.57
LINC00963-218ENST00000624138 E9PCH4 1651 aa11.48□□□□□ -0.57
LINC00963-218ENST00000624138 CCDC125Q86Z20 511 aa11.47□□□□□ -0.57
LINC00963-218ENST00000624138 NALCNQ8IZF0 1738 aa11.46□□□□□ -0.57
LINC00963-218ENST00000624138 ADGRL2O95490 1459 aa11.45□□□□□ -0.58
LINC00963-218ENST00000624138 BRWD3Q6RI45 1802 aa11.45□□□□□ -0.58
LINC00963-218ENST00000624138 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
LINC00963-218ENST00000624138 TRPC5Q9UL62 973 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-218ENST00000624138 LRP5O75197 1615 aa11.44□□□□□ -0.58
LINC00963-218ENST00000624138 COL22A1Q8NFW1 1626 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-218ENST00000624138 ATRNO75882 1429 aa11.43□□□□□ -0.58
LINC00963-218ENST00000624138 IQGAP3Q86VI3 1631 aa11.43□□□□□ -0.58
LINC00963-218ENST00000624138 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
LINC00963-218ENST00000624138 DDX17Q92841 729 aaKnown RBP11.43□□□□□ -0.58
LINC00963-218ENST00000624138 USP21Q9UK80 565 aa11.43□□□□□ -0.58
LINC00963-218ENST00000624138 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
LINC00963-218ENST00000624138 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
LINC00963-218ENST00000624138 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.42□□□□□ -0.58
LINC00963-218ENST00000624138 PTCH1Q13635 1447 aa11.42□□□□□ -0.58
LINC00963-218ENST00000624138 ADGRL3Q9HAR2 1447 aa11.41□□□□□ -0.58
LINC00963-218ENST00000624138 ANKRD50Q9ULJ7 1429 aa11.4□□□□□ -0.58
LINC00963-218ENST00000624138 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
LINC00963-218ENST00000624138 SPHKAPQ2M3C7 1700 aa11.39□□□□□ -0.59
LINC00963-218ENST00000624138 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
LINC00963-218ENST00000624138 BCL9LQ86UU0 1499 aa11.38□□□□□ -0.59
LINC00963-218ENST00000624138 METP08581 1390 aa11.37□□□□□ -0.59
LINC00963-218ENST00000624138 BLMP54132 1417 aaPredicted RBP11.35□□□□□ -0.59
LINC00963-218ENST00000624138 MYOM2P54296 1465 aa11.35□□□□□ -0.59
LINC00963-218ENST00000624138 GLI3P10071 1580 aa11.35□□□□□ -0.59
LINC00963-218ENST00000624138 KIF1BO60333 1816 aa11.35□□□□□ -0.59
LINC00963-218ENST00000624138 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
LINC00963-218ENST00000624138 ORAI2Q96SN7 254 aa11.33□□□□□ -0.6
LINC00963-218ENST00000624138 NEXMIFQ5QGS0 1516 aa11.31□□□□□ -0.6
LINC00963-218ENST00000624138 DEFB132Q7Z7B7 95 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms