RNA–Protein interactions for RNA: ENST00000623788.1

ERCC6-212, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 4

Gene ERCC6, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-212ENST00000623788 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
ERCC6-212ENST00000623788 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
ERCC6-212ENST00000623788 REPIN1Q9BWE0 567 aaKnown RBP9.17□□□□□ -0.94
ERCC6-212ENST00000623788 TSKSQ9UJT2 592 aa9.17□□□□□ -0.94
ERCC6-212ENST00000623788 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
ERCC6-212ENST00000623788 CLCN1P35523 988 aa9.16□□□□□ -0.94
ERCC6-212ENST00000623788 GIGYF2Q6Y7W6 1299 aaKnown RBP9.16□□□□□ -0.94
ERCC6-212ENST00000623788 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
ERCC6-212ENST00000623788 LAPTM4AQ15012 233 aa9.15□□□□□ -0.94
ERCC6-212ENST00000623788 EYA1Q99502 592 aa9.15□□□□□ -0.94
ERCC6-212ENST00000623788 GPCPD1Q9NPB8 672 aa9.15□□□□□ -0.94
ERCC6-212ENST00000623788 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
ERCC6-212ENST00000623788 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
ERCC6-212ENST00000623788 DDRGK1Q96HY6 314 aa9.14□□□□□ -0.95
ERCC6-212ENST00000623788 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
ERCC6-212ENST00000623788 WBP1LQ9NX94 342 aa9.14□□□□□ -0.95
ERCC6-212ENST00000623788 PLEKHG3A1L390 1219 aa9.13□□□□□ -0.95
ERCC6-212ENST00000623788 FAM98CQ17RN3 349 aaKnown RBP9.13□□□□□ -0.95
ERCC6-212ENST00000623788 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
ERCC6-212ENST00000623788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.12□□□□□ -0.95
ERCC6-212ENST00000623788 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
ERCC6-212ENST00000623788 MS4A1P11836 297 aa9.12□□□□□ -0.95
ERCC6-212ENST00000623788 MDM2Q00987 491 aaPredicted RBP9.12□□□□□ -0.95
ERCC6-212ENST00000623788 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
ERCC6-212ENST00000623788 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
ERCC6-212ENST00000623788 C3orf80F5H4A9 247 aa9.11□□□□□ -0.95
ERCC6-212ENST00000623788 FAM217BQ9NTX9 383 aaPredicted RBP9.11□□□□□ -0.95
ERCC6-212ENST00000623788 SEPT9Q9UHD8 586 aaPredicted RBP9.11□□□□□ -0.95
ERCC6-212ENST00000623788 GTF3C3Q9Y5Q9 886 aa9.11□□□□□ -0.95
ERCC6-212ENST00000623788 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
ERCC6-212ENST00000623788 IL27Q8NEV9 243 aa9.09□□□□□ -0.95
ERCC6-212ENST00000623788 TATDN2Q93075 761 aa9.09□□□□□ -0.95
ERCC6-212ENST00000623788 GOPCQ9HD26 462 aa9.09□□□□□ -0.95
ERCC6-212ENST00000623788 RCCD1A6NED2 376 aa9.08□□□□□ -0.96
ERCC6-212ENST00000623788 NUDT18Q6ZVK8 323 aa9.08□□□□□ -0.96
ERCC6-212ENST00000623788 HPS5Q9UPZ3 1129 aa9.08□□□□□ -0.96
ERCC6-212ENST00000623788 DNAJB2P25686 324 aa9.07□□□□□ -0.96
ERCC6-212ENST00000623788 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
ERCC6-212ENST00000623788 PPP4CP60510 307 aa9.06□□□□□ -0.96
ERCC6-212ENST00000623788 NLRP7Q8WX94 980 aa9.06□□□□□ -0.96
ERCC6-212ENST00000623788 TMEM134Q9H6X4 195 aa9.06□□□□□ -0.96
ERCC6-212ENST00000623788 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
ERCC6-212ENST00000623788 GFRA3O60609 400 aa9.03□□□□□ -0.96
ERCC6-212ENST00000623788 SH3D19Q5HYK7 790 aa9.02□□□□□ -0.97
ERCC6-212ENST00000623788 TRAF7Q6Q0C0 670 aa9.02□□□□□ -0.97
ERCC6-212ENST00000623788 CD46P15529 392 aa9.01□□□□□ -0.97
ERCC6-212ENST00000623788 BEGAINQ9BUH8 593 aa9.01□□□□□ -0.97
ERCC6-212ENST00000623788 SMAPO00193 183 aa9□□□□□ -0.97
ERCC6-212ENST00000623788 SULF1Q8IWU6 871 aa9□□□□□ -0.97
ERCC6-212ENST00000623788 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
ERCC6-212ENST00000623788 ERICH6Q7L0X2 663 aa8.98□□□□□ -0.97
ERCC6-212ENST00000623788 RSPH6AQ9H0K4 717 aa8.98□□□□□ -0.97
ERCC6-212ENST00000623788 NRG2O14511 850 aaPredicted RBP8.96□□□□□ -0.98
ERCC6-212ENST00000623788 SKIV2LQ15477 1246 aaKnown RBP8.96□□□□□ -0.98
ERCC6-212ENST00000623788 DIXDC1Q155Q3 683 aa8.96□□□□□ -0.98
ERCC6-212ENST00000623788 PRKD2Q9BZL6 878 aa8.96□□□□□ -0.98
ERCC6-212ENST00000623788 IL21Q9HBE4 155 aa8.96□□□□□ -0.98
ERCC6-212ENST00000623788 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
ERCC6-212ENST00000623788 MYSM1Q5VVJ2 828 aa8.95□□□□□ -0.98
ERCC6-212ENST00000623788 V9GY48 417 aaPredicted RBP8.95□□□□□ -0.98
ERCC6-212ENST00000623788 SWT1Q5T5J6 900 aaKnown RBP8.94□□□□□ -0.98
ERCC6-212ENST00000623788 SAMD7Q7Z3H4 446 aa8.94□□□□□ -0.98
ERCC6-212ENST00000623788 NECTIN2Q92692 538 aa8.94□□□□□ -0.98
ERCC6-212ENST00000623788 TBC1D2Q9BYX2 928 aa8.94□□□□□ -0.98
ERCC6-212ENST00000623788 TIMELESSQ9UNS1 1208 aa8.94□□□□□ -0.98
ERCC6-212ENST00000623788 TUSC1Q2TAM9 212 aa8.93□□□□□ -0.98
ERCC6-212ENST00000623788 PCMTD1Q96MG8 357 aaPredicted RBP8.93□□□□□ -0.98
ERCC6-212ENST00000623788 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
ERCC6-212ENST00000623788 GJA5P36382 358 aa8.92□□□□□ -0.98
ERCC6-212ENST00000623788 PPP1R18Q6NYC8 613 aa8.92□□□□□ -0.98
ERCC6-212ENST00000623788 SPIRE2Q8WWL2 714 aa8.92□□□□□ -0.98
ERCC6-212ENST00000623788 MTRQ99707 1265 aa8.92□□□□□ -0.98
ERCC6-212ENST00000623788 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.92□□□□□ -0.98
ERCC6-212ENST00000623788 SLC10A3P09131 477 aa8.91□□□□□ -0.98
ERCC6-212ENST00000623788 GGCXP38435 758 aa8.91□□□□□ -0.98
ERCC6-212ENST00000623788 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.91□□□□□ -0.98
ERCC6-212ENST00000623788 GCGRP47871 477 aa8.9□□□□□ -0.98
ERCC6-212ENST00000623788 SPTLC1O15269 473 aa8.89□□□□□ -0.99
ERCC6-212ENST00000623788 CLK2P49760 499 aaKnown RBP8.89□□□□□ -0.99
ERCC6-212ENST00000623788 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
ERCC6-212ENST00000623788 RNF40O75150 1001 aa8.88□□□□□ -0.99
ERCC6-212ENST00000623788 USP46P62068 366 aa8.88□□□□□ -0.99
ERCC6-212ENST00000623788 RSPH4AQ5TD94 716 aa8.88□□□□□ -0.99
ERCC6-212ENST00000623788 SLC4A3P48751 1232 aa8.87□□□□□ -0.99
ERCC6-212ENST00000623788 RSBN1LQ6PCB5 846 aaPredicted RBP8.87□□□□□ -0.99
ERCC6-212ENST00000623788 RDH13Q8NBN7 331 aa8.87□□□□□ -0.99
ERCC6-212ENST00000623788 PDZRN3Q9UPQ7 1066 aa8.87□□□□□ -0.99
ERCC6-212ENST00000623788 LCE2BO14633 110 aa8.86□□□□□ -0.99
ERCC6-212ENST00000623788 KDM4AO75164 1064 aa8.86□□□□□ -0.99
ERCC6-212ENST00000623788 ZNF787Q6DD87 383 aa8.86□□□□□ -0.99
ERCC6-212ENST00000623788 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
ERCC6-212ENST00000623788 LIMD1Q9UGP4 676 aa8.86□□□□□ -0.99
ERCC6-212ENST00000623788 PPP2R2DQ66LE6 453 aa8.85□□□□□ -0.99
ERCC6-212ENST00000623788 RIC3Q7Z5B4 369 aa8.85□□□□□ -0.99
ERCC6-212ENST00000623788 NUTM1Q86Y26 1132 aa8.85□□□□□ -0.99
ERCC6-212ENST00000623788 POLR3EQ9NVU0 708 aa8.85□□□□□ -0.99
ERCC6-212ENST00000623788 MOXD2PA6NHM9 499 aa8.84□□□□□ -0.99
ERCC6-212ENST00000623788 HOXA2O43364 376 aa8.84□□□□□ -0.99
ERCC6-212ENST00000623788 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
ERCC6-212ENST00000623788 C14orf37Q86TY3 774 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms