RNA–Protein interactions for RNA: ENST00000622062.1

WHAMMP3-204, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3, humanhuman

TSL 1 (best)

Gene WHAMMP3, Length 2,944 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMMP3-204ENST00000622062 ERICH6Q7L0X2 663 aa11.28□□□□□ -0.6
WHAMMP3-204ENST00000622062 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
WHAMMP3-204ENST00000622062 UNC13BO14795 1591 aa11.27□□□□□ -0.6
WHAMMP3-204ENST00000622062 ATP10AO60312 1499 aa11.27□□□□□ -0.6
WHAMMP3-204ENST00000622062 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
WHAMMP3-204ENST00000622062 STK26Q9P289 416 aa11.27□□□□□ -0.61
WHAMMP3-204ENST00000622062 IQGAP3Q86VI3 1631 aa11.27□□□□□ -0.61
WHAMMP3-204ENST00000622062 BRD4O60885 1362 aaPredicted RBP11.26□□□□□ -0.61
WHAMMP3-204ENST00000622062 ATP7AQ04656 1500 aa11.26□□□□□ -0.61
WHAMMP3-204ENST00000622062 ZFYVE16Q7Z3T8 1539 aa11.26□□□□□ -0.61
WHAMMP3-204ENST00000622062 MLECQ14165 292 aa11.26□□□□□ -0.61
WHAMMP3-204ENST00000622062 TRPM1Q7Z4N2 1603 aa11.26□□□□□ -0.61
WHAMMP3-204ENST00000622062 WDR43Q15061 677 aaKnown RBP eCLIP11.25□□□□□ -0.61
WHAMMP3-204ENST00000622062 GPRASP1Q5JY77 1395 aa11.25□□□□□ -0.61
WHAMMP3-204ENST00000622062 POLR1AO95602 1720 aaPredicted RBP11.24□□□□□ -0.61
WHAMMP3-204ENST00000622062 RTEL1-TNFRSF6BF6WH68 1400 aa11.24□□□□□ -0.61
WHAMMP3-204ENST00000622062 E9PCH4 1651 aa11.24□□□□□ -0.61
WHAMMP3-204ENST00000622062 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
WHAMMP3-204ENST00000622062 PARD3Q8TEW0 1356 aa11.24□□□□□ -0.61
WHAMMP3-204ENST00000622062 PPP2R1AP30153 589 aa11.23□□□□□ -0.61
WHAMMP3-204ENST00000622062 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
WHAMMP3-204ENST00000622062 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
WHAMMP3-204ENST00000622062 COL17A1Q9UMD9 1497 aaPredicted RBP11.22□□□□□ -0.61
WHAMMP3-204ENST00000622062 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
WHAMMP3-204ENST00000622062 CDCA8Q53HL2 280 aa11.22□□□□□ -0.61
WHAMMP3-204ENST00000622062 EXOC6Q8TAG9 804 aa11.22□□□□□ -0.61
WHAMMP3-204ENST00000622062 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
WHAMMP3-204ENST00000622062 KIF13AQ9H1H9 1805 aa11.21□□□□□ -0.61
WHAMMP3-204ENST00000622062 NOS1P29475 1434 aa11.21□□□□□ -0.62
WHAMMP3-204ENST00000622062 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.62
WHAMMP3-204ENST00000622062 MAGI2Q86UL8 1455 aa11.21□□□□□ -0.62
WHAMMP3-204ENST00000622062 LRPPRCP42704 1394 aaKnown RBP11.2□□□□□ -0.62
WHAMMP3-204ENST00000622062 FBXO31Q5XUX0 539 aaPredicted RBP11.2□□□□□ -0.62
WHAMMP3-204ENST00000622062 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
WHAMMP3-204ENST00000622062 CLTCL1P53675 1640 aa11.2□□□□□ -0.62
WHAMMP3-204ENST00000622062 PRDM15P57071 1507 aaPredicted RBP11.19□□□□□ -0.62
WHAMMP3-204ENST00000622062 ZNF518AQ6AHZ1 1483 aa11.19□□□□□ -0.62
WHAMMP3-204ENST00000622062 IDI1Q13907 227 aa11.19□□□□□ -0.62
WHAMMP3-204ENST00000622062 SKAP1Q86WV1 359 aa11.19□□□□□ -0.62
WHAMMP3-204ENST00000622062 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
WHAMMP3-204ENST00000622062 PTPRTO14522 1441 aa11.18□□□□□ -0.62
WHAMMP3-204ENST00000622062 RRP1P56182 461 aaKnown RBP11.18□□□□□ -0.62
WHAMMP3-204ENST00000622062 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
WHAMMP3-204ENST00000622062 APAF1O14727 1248 aa11.18□□□□□ -0.62
WHAMMP3-204ENST00000622062 EIF3AQ14152 1382 aaKnown RBP11.18□□□□□ -0.62
WHAMMP3-204ENST00000622062 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
WHAMMP3-204ENST00000622062 ABCA9Q8IUA7 1624 aa11.17□□□□□ -0.62
WHAMMP3-204ENST00000622062 TRPM2O94759 1503 aa11.17□□□□□ -0.62
WHAMMP3-204ENST00000622062 NPATQ14207 1427 aa11.17□□□□□ -0.62
WHAMMP3-204ENST00000622062 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
WHAMMP3-204ENST00000622062 ERICH6BQ5W0A0 696 aa11.16□□□□□ -0.62
WHAMMP3-204ENST00000622062 C20orf194Q5TEA3 1177 aa11.15□□□□□ -0.62
WHAMMP3-204ENST00000622062 MORC1Q86VD1 984 aa11.15□□□□□ -0.62
WHAMMP3-204ENST00000622062 SPHKAPQ2M3C7 1700 aa11.15□□□□□ -0.62
WHAMMP3-204ENST00000622062 EIF2AK4Q9P2K8 1649 aaKnown RBP11.15□□□□□ -0.63
WHAMMP3-204ENST00000622062 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.63
WHAMMP3-204ENST00000622062 KIDINS220Q9ULH0 1771 aa11.14□□□□□ -0.63
WHAMMP3-204ENST00000622062 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
WHAMMP3-204ENST00000622062 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
WHAMMP3-204ENST00000622062 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
WHAMMP3-204ENST00000622062 GLI2P10070 1586 aa11.14□□□□□ -0.63
WHAMMP3-204ENST00000622062 INO80Q9ULG1 1556 aaPredicted RBP11.14□□□□□ -0.63
WHAMMP3-204ENST00000622062 MADDQ8WXG6 1647 aa11.14□□□□□ -0.63
WHAMMP3-204ENST00000622062 YEATS2Q9ULM3 1422 aa11.13□□□□□ -0.63
WHAMMP3-204ENST00000622062 MINK1Q8N4C8 1332 aaPredicted RBP11.13□□□□□ -0.63
WHAMMP3-204ENST00000622062 ARAP3Q8WWN8 1544 aa11.13□□□□□ -0.63
WHAMMP3-204ENST00000622062 C14orf93Q9H972 538 aaKnown RBP11.13□□□□□ -0.63
WHAMMP3-204ENST00000622062 VGFO15240 615 aaPredicted RBP11.12□□□□□ -0.63
WHAMMP3-204ENST00000622062 TET3O43151 1660 aa11.12□□□□□ -0.63
WHAMMP3-204ENST00000622062 CRBNQ96SW2 442 aa11.12□□□□□ -0.63
WHAMMP3-204ENST00000622062 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
WHAMMP3-204ENST00000622062 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
WHAMMP3-204ENST00000622062 POGKQ9P215 609 aa11.12□□□□□ -0.63
WHAMMP3-204ENST00000622062 DIP2BQ9P265 1576 aa11.12□□□□□ -0.63
WHAMMP3-204ENST00000622062 PLEKHH1Q9ULM0 1364 aa11.12□□□□□ -0.63
WHAMMP3-204ENST00000622062 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
WHAMMP3-204ENST00000622062 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
WHAMMP3-204ENST00000622062 TMEM132AQ24JP5 1023 aa11.11□□□□□ -0.63
WHAMMP3-204ENST00000622062 PODXL2Q9NZ53 605 aa11.11□□□□□ -0.63
WHAMMP3-204ENST00000622062 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
WHAMMP3-204ENST00000622062 CEP152O94986 1710 aa11.11□□□□□ -0.63
WHAMMP3-204ENST00000622062 PPM1GO15355 546 aaPredicted RBP11.1□□□□□ -0.63
WHAMMP3-204ENST00000622062 PPRC1Q5VV67 1664 aaKnown RBP11.1□□□□□ -0.63
WHAMMP3-204ENST00000622062 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
WHAMMP3-204ENST00000622062 MROH1Q8NDA8 1641 aa11.1□□□□□ -0.63
WHAMMP3-204ENST00000622062 MTHFSP49914 203 aa11.1□□□□□ -0.63
WHAMMP3-204ENST00000622062 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
WHAMMP3-204ENST00000622062 FBLN1P23142 703 aa11.09□□□□□ -0.63
WHAMMP3-204ENST00000622062 PRAM1Q96QH2 718 aa11.09□□□□□ -0.63
WHAMMP3-204ENST00000622062 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
WHAMMP3-204ENST00000622062 ERVK-7P63135 1459 aa11.09□□□□□ -0.63
WHAMMP3-204ENST00000622062 RNF17Q9BXT8 1623 aaKnown RBP11.08□□□□□ -0.63
WHAMMP3-204ENST00000622062 NSD3Q9BZ95 1437 aa11.08□□□□□ -0.64
WHAMMP3-204ENST00000622062 BCAR3O75815 825 aa11.08□□□□□ -0.64
WHAMMP3-204ENST00000622062 PIAS4Q8N2W9 510 aaPredicted RBP11.08□□□□□ -0.64
WHAMMP3-204ENST00000622062 DEPDC5O75140 1603 aa11.08□□□□□ -0.64
WHAMMP3-204ENST00000622062 DUSP27Q5VZP5 1158 aa11.08□□□□□ -0.64
WHAMMP3-204ENST00000622062 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
WHAMMP3-204ENST00000622062 BCL2L13Q9BXK5 485 aa11.07□□□□□ -0.64
WHAMMP3-204ENST00000622062 ESF1Q9H501 851 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms