RNA–Protein interactions for RNA: ENST00000620706.1

UBXN8-210, Transcript of UBX domain protein 8, humanhuman

TSL 3

Gene UBXN8, Length 654 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-210ENST00000620706 ARHGAP23Q9P227 1491 aa13.78□□□□□ -0.2
UBXN8-210ENST00000620706 ABCC3O15438 1527 aa13.78□□□□□ -0.2
UBXN8-210ENST00000620706 DIP2AQ14689 1571 aa13.77□□□□□ -0.21
UBXN8-210ENST00000620706 R3HDM1Q15032 1099 aaKnown RBP13.77□□□□□ -0.21
UBXN8-210ENST00000620706 UBR1Q8IWV7 1749 aa13.77□□□□□ -0.21
UBXN8-210ENST00000620706 CDC42BPAQ5VT25 1732 aa13.76□□□□□ -0.21
UBXN8-210ENST00000620706 SLIT1O75093 1534 aa13.76□□□□□ -0.21
UBXN8-210ENST00000620706 CFDP1Q9UEE9 299 aaPredicted RBP13.76□□□□□ -0.21
UBXN8-210ENST00000620706 NKTRP30414 1462 aaKnown RBP13.75□□□□□ -0.21
UBXN8-210ENST00000620706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBXN8-210ENST00000620706 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
UBXN8-210ENST00000620706 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
UBXN8-210ENST00000620706 KDM5AP29375 1690 aaKnown RBP13.74□□□□□ -0.21
UBXN8-210ENST00000620706 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
UBXN8-210ENST00000620706 BCL9LQ86UU0 1499 aa13.73□□□□□ -0.21
UBXN8-210ENST00000620706 TMEM2Q9UHN6 1383 aa13.72□□□□□ -0.21
UBXN8-210ENST00000620706 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
UBXN8-210ENST00000620706 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
UBXN8-210ENST00000620706 SETD5Q9C0A6 1442 aa13.72□□□□□ -0.21
UBXN8-210ENST00000620706 DDX17Q92841 729 aaKnown RBP13.71□□□□□ -0.21
UBXN8-210ENST00000620706 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.21
UBXN8-210ENST00000620706 ARHGAP35Q9NRY4 1499 aa13.71□□□□□ -0.21
UBXN8-210ENST00000620706 ATRNO75882 1429 aa13.71□□□□□ -0.22
UBXN8-210ENST00000620706 PNPLA6Q8IY17 1366 aa13.71□□□□□ -0.22
UBXN8-210ENST00000620706 BAG6P46379 1132 aa13.7□□□□□ -0.22
UBXN8-210ENST00000620706 APLP2Q06481 763 aa13.7□□□□□ -0.22
UBXN8-210ENST00000620706 FNBP4Q8N3X1 1017 aaPredicted RBP13.7□□□□□ -0.22
UBXN8-210ENST00000620706 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
UBXN8-210ENST00000620706 CEP350Q5VT06 3117 aa13.69□□□□□ -0.22
UBXN8-210ENST00000620706 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
UBXN8-210ENST00000620706 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
UBXN8-210ENST00000620706 GJD4Q96KN9 370 aaPredicted RBP13.68□□□□□ -0.22
UBXN8-210ENST00000620706 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
UBXN8-210ENST00000620706 RTEL1-TNFRSF6BF6WH68 1400 aa13.67□□□□□ -0.22
UBXN8-210ENST00000620706 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
UBXN8-210ENST00000620706 TET3O43151 1660 aa13.66□□□□□ -0.22
UBXN8-210ENST00000620706 MYT1Q01538 1121 aa13.64□□□□□ -0.23
UBXN8-210ENST00000620706 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
UBXN8-210ENST00000620706 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
UBXN8-210ENST00000620706 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
UBXN8-210ENST00000620706 NCOA3Q9Y6Q9 1424 aa13.63□□□□□ -0.23
UBXN8-210ENST00000620706 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
UBXN8-210ENST00000620706 ASXL1Q8IXJ9 1541 aa13.61□□□□□ -0.23
UBXN8-210ENST00000620706 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
UBXN8-210ENST00000620706 RRBP1Q9P2E9 1410 aaKnown RBP13.59□□□□□ -0.23
UBXN8-210ENST00000620706 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
UBXN8-210ENST00000620706 MROH1Q8NDA8 1641 aa13.59□□□□□ -0.23
UBXN8-210ENST00000620706 CAPN15O75808 1086 aa13.58□□□□□ -0.24
UBXN8-210ENST00000620706 IDI1Q13907 227 aa13.58□□□□□ -0.24
UBXN8-210ENST00000620706 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
UBXN8-210ENST00000620706 CCDC18Q5T9S5 1454 aa13.57□□□□□ -0.24
UBXN8-210ENST00000620706 MBD5Q9P267 1494 aa13.57□□□□□ -0.24
UBXN8-210ENST00000620706 PTCH1Q13635 1447 aa13.56□□□□□ -0.24
UBXN8-210ENST00000620706 EFCAB6Q5THR3 1501 aa13.56□□□□□ -0.24
UBXN8-210ENST00000620706 CHD2O14647 1828 aaKnown RBP13.56□□□□□ -0.24
UBXN8-210ENST00000620706 GIGYF1O75420 1035 aaPredicted RBP13.56□□□□□ -0.24
UBXN8-210ENST00000620706 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
UBXN8-210ENST00000620706 KRT27Q7Z3Y8 459 aa13.56□□□□□ -0.24
UBXN8-210ENST00000620706 UNC13BO14795 1591 aa13.56□□□□□ -0.24
UBXN8-210ENST00000620706 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
UBXN8-210ENST00000620706 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
UBXN8-210ENST00000620706 BRWD3Q6RI45 1802 aa13.53□□□□□ -0.24
UBXN8-210ENST00000620706 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
UBXN8-210ENST00000620706 SPON1Q9HCB6 807 aa13.52□□□□□ -0.25
UBXN8-210ENST00000620706 TBX22Q9Y458 520 aa13.52□□□□□ -0.25
UBXN8-210ENST00000620706 NINLQ9Y2I6 1382 aa13.52□□□□□ -0.25
UBXN8-210ENST00000620706 UTRNP46939 3433 aa13.51□□□□□ -0.25
UBXN8-210ENST00000620706 CAMTA1Q9Y6Y1 1673 aa13.51□□□□□ -0.25
UBXN8-210ENST00000620706 A0A0G2JS52 829 aa13.51□□□□□ -0.25
UBXN8-210ENST00000620706 SLC34A2O95436 690 aa13.51□□□□□ -0.25
UBXN8-210ENST00000620706 UNC5CLQ8IV45 518 aa13.51□□□□□ -0.25
UBXN8-210ENST00000620706 MST1RQ04912 1400 aa13.5□□□□□ -0.25
UBXN8-210ENST00000620706 CCDC9Q9Y3X0 531 aaKnown RBP13.5□□□□□ -0.25
UBXN8-210ENST00000620706 CEP152O94986 1710 aa13.5□□□□□ -0.25
UBXN8-210ENST00000620706 TSPY4P0CV99 314 aa13.49□□□□□ -0.25
UBXN8-210ENST00000620706 TSPY10P0CW01 314 aa13.49□□□□□ -0.25
UBXN8-210ENST00000620706 AMOTL2Q9Y2J4 779 aa13.49□□□□□ -0.25
UBXN8-210ENST00000620706 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
UBXN8-210ENST00000620706 KCNQ2O43526 872 aa13.48□□□□□ -0.25
UBXN8-210ENST00000620706 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
UBXN8-210ENST00000620706 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
UBXN8-210ENST00000620706 GLI3P10071 1580 aa13.47□□□□□ -0.25
UBXN8-210ENST00000620706 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
UBXN8-210ENST00000620706 CASKIN1Q8WXD9 1431 aa13.47□□□□□ -0.25
UBXN8-210ENST00000620706 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.25
UBXN8-210ENST00000620706 CCDC141Q6ZP82 1450 aa13.46□□□□□ -0.25
UBXN8-210ENST00000620706 FAM182BQ5T319 152 aa13.45□□□□□ -0.26
UBXN8-210ENST00000620706 DCCP43146 1447 aa13.45□□□□□ -0.26
UBXN8-210ENST00000620706 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
UBXN8-210ENST00000620706 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
UBXN8-210ENST00000620706 ARHGAP31Q2M1Z3 1444 aa13.43□□□□□ -0.26
UBXN8-210ENST00000620706 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
UBXN8-210ENST00000620706 NBPF14Q5TI25 921 aa13.42□□□□□ -0.26
UBXN8-210ENST00000620706 MTUS2Q5JR59 1369 aa13.42□□□□□ -0.26
UBXN8-210ENST00000620706 CAMKK2Q96RR4 588 aa13.41□□□□□ -0.26
UBXN8-210ENST00000620706 ORAI2Q96SN7 254 aa13.41□□□□□ -0.26
UBXN8-210ENST00000620706 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
UBXN8-210ENST00000620706 DHX57Q6P158 1386 aaKnown RBP13.4□□□□□ -0.26
UBXN8-210ENST00000620706 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
UBXN8-210ENST00000620706 VPS72Q15906 364 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms