RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
AGRN-210ENST00000620552 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
AGRN-210ENST00000620552 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.39■□□□□ 0.376e-7■■□□□ 11.5
AGRN-210ENST00000620552 USP47Q96K76 1375 aa17.39■□□□□ 0.37
AGRN-210ENST00000620552 DIAPH1O60610 1272 aaKnown RBP17.38■□□□□ 0.37
AGRN-210ENST00000620552 PHF14O94880 888 aa17.37■□□□□ 0.37
AGRN-210ENST00000620552 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
AGRN-210ENST00000620552 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
AGRN-210ENST00000620552 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
AGRN-210ENST00000620552 RUSC2Q8N2Y8 1516 aa17.37■□□□□ 0.37
AGRN-210ENST00000620552 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
AGRN-210ENST00000620552 ZKSCAN2Q63HK3 967 aa17.37■□□□□ 0.37
AGRN-210ENST00000620552 DDX58O95786 925 aaKnown RBP17.36■□□□□ 0.37
AGRN-210ENST00000620552 ARHGAP5Q13017 1502 aa17.36■□□□□ 0.37
AGRN-210ENST00000620552 E9PSI1 815 aa17.36■□□□□ 0.37
AGRN-210ENST00000620552 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
AGRN-210ENST00000620552 RIPK4P57078 832 aa17.36■□□□□ 0.37
AGRN-210ENST00000620552 DHX16O60231 1041 aaKnown RBP17.35■□□□□ 0.37
AGRN-210ENST00000620552 GOLGA6L3A6NEY3 463 aa17.35■□□□□ 0.37
AGRN-210ENST00000620552 IFIT2P09913 472 aaKnown RBP17.35■□□□□ 0.37
AGRN-210ENST00000620552 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
AGRN-210ENST00000620552 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
AGRN-210ENST00000620552 RBM33Q96EV2 1170 aaKnown RBP17.34■□□□□ 0.37
AGRN-210ENST00000620552 HMOX1P09601 288 aa17.33■□□□□ 0.37
AGRN-210ENST00000620552 TPM3P06753 285 aa17.33■□□□□ 0.37
AGRN-210ENST00000620552 FBXO3Q9UK99 471 aa17.33■□□□□ 0.36
AGRN-210ENST00000620552 TRIM29Q14134 588 aa17.32■□□□□ 0.36
AGRN-210ENST00000620552 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
AGRN-210ENST00000620552 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
AGRN-210ENST00000620552 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
AGRN-210ENST00000620552 TPM2P07951 284 aa17.32■□□□□ 0.36
AGRN-210ENST00000620552 AIMP1Q12904 312 aaKnown RBP17.32■□□□□ 0.36
AGRN-210ENST00000620552 FKBP5Q13451 457 aaPredicted RBP17.31■□□□□ 0.36
AGRN-210ENST00000620552 TSR1Q2NL82 804 aaKnown RBP17.31■□□□□ 0.36
AGRN-210ENST00000620552 CRBNQ96SW2 442 aa17.31■□□□□ 0.36
AGRN-210ENST00000620552 COG6Q9Y2V7 657 aa17.31■□□□□ 0.36
AGRN-210ENST00000620552 CUX1P39880 1505 aa17.31■□□□□ 0.36
AGRN-210ENST00000620552 APAF1O14727 1248 aa17.31■□□□□ 0.36
AGRN-210ENST00000620552 GOLGA6L1Q8N7Z2 621 aa17.31■□□□□ 0.36
AGRN-210ENST00000620552 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
AGRN-210ENST00000620552 DHX57Q6P158 1386 aaKnown RBP17.3■□□□□ 0.36
AGRN-210ENST00000620552 FYB1O15117 783 aa17.3■□□□□ 0.36
AGRN-210ENST00000620552 G3BP1Q13283 466 aaKnown RBP eCLIP17.3■□□□□ 0.36
AGRN-210ENST00000620552 RIC3Q7Z5B4 369 aa17.3■□□□□ 0.36
AGRN-210ENST00000620552 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
AGRN-210ENST00000620552 NFXL1Q6ZNB6 911 aa17.29■□□□□ 0.36
AGRN-210ENST00000620552 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
AGRN-210ENST00000620552 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
AGRN-210ENST00000620552 NLRP2Q9NX02 1062 aa17.29■□□□□ 0.36
AGRN-210ENST00000620552 IPO9Q96P70 1041 aaKnown RBP17.28■□□□□ 0.36
AGRN-210ENST00000620552 ERICH2A1L162 156 aa17.27■□□□□ 0.36
AGRN-210ENST00000620552 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
AGRN-210ENST00000620552 GOLGA6L19H0YKK7 550 aa17.27■□□□□ 0.36
AGRN-210ENST00000620552 CCDC27Q2M243 656 aa17.27■□□□□ 0.36
AGRN-210ENST00000620552 TRDNQ13061 729 aa17.27■□□□□ 0.36
AGRN-210ENST00000620552 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
AGRN-210ENST00000620552 MIA2Q96PC5 1412 aa17.27■□□□□ 0.35
AGRN-210ENST00000620552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.35
AGRN-210ENST00000620552 ROCK1Q13464 1354 aa17.27■□□□□ 0.35
AGRN-210ENST00000620552 PCMTD1Q96MG8 357 aaPredicted RBP17.26■□□□□ 0.35
AGRN-210ENST00000620552 CPLX2Q6PUV4 134 aaKnown RBP17.26■□□□□ 0.35
AGRN-210ENST00000620552 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
AGRN-210ENST00000620552 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.356e-7■■■■■ 36.4
AGRN-210ENST00000620552 FOSBP53539 338 aa17.25■□□□□ 0.35
AGRN-210ENST00000620552 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
AGRN-210ENST00000620552 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
AGRN-210ENST00000620552 ESCO1Q5FWF5 840 aa17.24■□□□□ 0.35
AGRN-210ENST00000620552 CPLX1O14810 134 aa17.24■□□□□ 0.35
AGRN-210ENST00000620552 ZNF644Q9H582 1327 aaPredicted RBP17.24■□□□□ 0.35
AGRN-210ENST00000620552 TMEM132EQ6IEE7 984 aa17.24■□□□□ 0.35
AGRN-210ENST00000620552 PPP1R1BQ9UD71 204 aaPredicted RBP17.24■□□□□ 0.35
AGRN-210ENST00000620552 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
AGRN-210ENST00000620552 DDX19BQ9UMR2 479 aa17.24■□□□□ 0.35
AGRN-210ENST00000620552 ABTB2Q8N961 1025 aa17.24■□□□□ 0.35
AGRN-210ENST00000620552 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
AGRN-210ENST00000620552 NEUROD6Q96NK8 337 aa17.23■□□□□ 0.35
AGRN-210ENST00000620552 RUNDC1Q96C34 613 aa17.23■□□□□ 0.35
AGRN-210ENST00000620552 EXOC6Q8TAG9 804 aa17.23■□□□□ 0.35
AGRN-210ENST00000620552 ATP6V1DQ9Y5K8 247 aa17.23■□□□□ 0.35
AGRN-210ENST00000620552 DDX11L8A8MPP1 907 aa17.23■□□□□ 0.35
AGRN-210ENST00000620552 CCDC43Q96MW1 224 aaKnown RBP17.23■□□□□ 0.35
AGRN-210ENST00000620552 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
AGRN-210ENST00000620552 TPM1P09493 284 aa17.22■□□□□ 0.35
AGRN-210ENST00000620552 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
AGRN-210ENST00000620552 BECN2A8MW95 431 aa17.22■□□□□ 0.35
AGRN-210ENST00000620552 GGNBP2Q9H3C7 697 aa17.22■□□□□ 0.35
AGRN-210ENST00000620552 NLRP6P59044 892 aa17.21■□□□□ 0.35
AGRN-210ENST00000620552 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
AGRN-210ENST00000620552 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.34
AGRN-210ENST00000620552 CCAR2Q8N163 923 aaKnown RBP17.2■□□□□ 0.34
AGRN-210ENST00000620552 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
AGRN-210ENST00000620552 SLC4A3P48751 1232 aa17.2■□□□□ 0.34
AGRN-210ENST00000620552 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
AGRN-210ENST00000620552 REC8O95072 547 aa17.2■□□□□ 0.34
AGRN-210ENST00000620552 RNF20Q5VTR2 975 aa17.19■□□□□ 0.34
AGRN-210ENST00000620552 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
AGRN-210ENST00000620552 PRKRIP1Q9H875 184 aaPredicted RBP17.19■□□□□ 0.34
AGRN-210ENST00000620552 CCDC47Q96A33 483 aaKnown RBP17.19■□□□□ 0.34
AGRN-210ENST00000620552 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
AGRN-210ENST00000620552 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms