RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 RRP7AQ9Y3A4 280 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-223ENST00000620507 CDC42BPAQ5VT25 1732 aa11.89□□□□□ -0.51
RBFOX1-223ENST00000620507 HDGFL2Q7Z4V5 671 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-223ENST00000620507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.89□□□□□ -0.51
RBFOX1-223ENST00000620507 SAMD9LQ8IVG5 1584 aa11.89□□□□□ -0.51
RBFOX1-223ENST00000620507 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-223ENST00000620507 RAPGEF3O95398 923 aa11.89□□□□□ -0.51
RBFOX1-223ENST00000620507 TERF2IPQ9NYB0 399 aa11.89□□□□□ -0.51
RBFOX1-223ENST00000620507 A2MP01023 1474 aa11.88□□□□□ -0.51
RBFOX1-223ENST00000620507 PDE4AP27815 886 aa11.88□□□□□ -0.51
RBFOX1-223ENST00000620507 PARD3Q8TEW0 1356 aa11.88□□□□□ -0.51
RBFOX1-223ENST00000620507 ADGRF5Q8IZF2 1346 aa11.88□□□□□ -0.51
RBFOX1-223ENST00000620507 NGEFQ8N5V2 710 aa11.87□□□□□ -0.51
RBFOX1-223ENST00000620507 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
RBFOX1-223ENST00000620507 SCAF11Q99590 1463 aaKnown RBP11.87□□□□□ -0.51
RBFOX1-223ENST00000620507 SLC12A5Q9H2X9 1139 aa11.87□□□□□ -0.51
RBFOX1-223ENST00000620507 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
RBFOX1-223ENST00000620507 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
RBFOX1-223ENST00000620507 CD109Q6YHK3 1445 aa11.86□□□□□ -0.51
RBFOX1-223ENST00000620507 WDR7Q9Y4E6 1490 aa11.85□□□□□ -0.51
RBFOX1-223ENST00000620507 CENPQQ7L2Z9 268 aaPredicted RBP11.85□□□□□ -0.51
RBFOX1-223ENST00000620507 KDM5CP41229 1560 aa11.85□□□□□ -0.51
RBFOX1-223ENST00000620507 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
RBFOX1-223ENST00000620507 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
RBFOX1-223ENST00000620507 MS4A1P11836 297 aa11.84□□□□□ -0.51
RBFOX1-223ENST00000620507 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
RBFOX1-223ENST00000620507 PREX2Q70Z35 1606 aa11.84□□□□□ -0.51
RBFOX1-223ENST00000620507 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.51
RBFOX1-223ENST00000620507 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 MTHFSP49914 203 aa11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 HDGFP51858 240 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 CLUAP1Q96AJ1 413 aa11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 RUNDC1Q96C34 613 aa11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 EIF2AK4Q9P2K8 1649 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 COL17A1Q9UMD9 1497 aaPredicted RBP11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 LRPPRCP42704 1394 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 KDM5DQ9BY66 1539 aa11.83□□□□□ -0.52
RBFOX1-223ENST00000620507 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-223ENST00000620507 CHD1O14646 1710 aa11.82□□□□□ -0.52
RBFOX1-223ENST00000620507 MYO5CQ9NQX4 1742 aa11.82□□□□□ -0.52
RBFOX1-223ENST00000620507 FAM69CQ0P6D2 419 aa11.82□□□□□ -0.52
RBFOX1-223ENST00000620507 RPGRIP1LQ68CZ1 1315 aa11.82□□□□□ -0.52
RBFOX1-223ENST00000620507 CROCC2H7BZ55 1655 aa11.82□□□□□ -0.52
RBFOX1-223ENST00000620507 BCL2L13Q9BXK5 485 aa11.81□□□□□ -0.52
RBFOX1-223ENST00000620507 MAST1Q9Y2H9 1570 aa11.81□□□□□ -0.52
RBFOX1-223ENST00000620507 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
RBFOX1-223ENST00000620507 BECN1Q14457 450 aa11.8□□□□□ -0.52
RBFOX1-223ENST00000620507 MSH5O43196 834 aa11.8□□□□□ -0.52
RBFOX1-223ENST00000620507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.8□□□□□ -0.52
RBFOX1-223ENST00000620507 TCP11L2Q8N4U5 519 aa11.8□□□□□ -0.52
RBFOX1-223ENST00000620507 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
RBFOX1-223ENST00000620507 PLA2R1Q13018 1463 aa11.79□□□□□ -0.52
RBFOX1-223ENST00000620507 ERCC6L2Q5T890 1561 aa11.79□□□□□ -0.52
RBFOX1-223ENST00000620507 NOS1P29475 1434 aa11.79□□□□□ -0.52
RBFOX1-223ENST00000620507 GGNBP2Q9H3C7 697 aa11.79□□□□□ -0.52
RBFOX1-223ENST00000620507 SMC4Q9NTJ3 1288 aa11.79□□□□□ -0.52
RBFOX1-223ENST00000620507 SLFN5Q08AF3 891 aa11.78□□□□□ -0.52
RBFOX1-223ENST00000620507 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
RBFOX1-223ENST00000620507 RWDD1Q9H446 243 aaPredicted RBP11.78□□□□□ -0.52
RBFOX1-223ENST00000620507 BCORL1Q5H9F3 1711 aa11.78□□□□□ -0.52
RBFOX1-223ENST00000620507 DEKP35659 375 aaKnown RBP11.77□□□□□ -0.52
RBFOX1-223ENST00000620507 BCAR3O75815 825 aa11.77□□□□□ -0.53
RBFOX1-223ENST00000620507 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.53
RBFOX1-223ENST00000620507 UHRF1BP1LA0JNW5 1464 aa11.77□□□□□ -0.53
RBFOX1-223ENST00000620507 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
RBFOX1-223ENST00000620507 C14orf93Q9H972 538 aaKnown RBP11.77□□□□□ -0.53
RBFOX1-223ENST00000620507 ZNF518AQ6AHZ1 1483 aa11.77□□□□□ -0.53
RBFOX1-223ENST00000620507 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
RBFOX1-223ENST00000620507 IPO8O15397 1037 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-223ENST00000620507 C20orf194Q5TEA3 1177 aa11.76□□□□□ -0.53
RBFOX1-223ENST00000620507 CDC42BPBQ9Y5S2 1711 aa11.76□□□□□ -0.53
RBFOX1-223ENST00000620507 RNF123Q5XPI4 1314 aa11.76□□□□□ -0.53
RBFOX1-223ENST00000620507 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
RBFOX1-223ENST00000620507 ITPRIPQ8IWB1 547 aa11.76□□□□□ -0.53
RBFOX1-223ENST00000620507 PRAM1Q96QH2 718 aa11.76□□□□□ -0.53
RBFOX1-223ENST00000620507 HSP90AA1P07900 732 aaKnown RBP11.75□□□□□ -0.53
RBFOX1-223ENST00000620507 IDI1Q13907 227 aa11.75□□□□□ -0.53
RBFOX1-223ENST00000620507 PANK1Q8TE04 598 aa11.75□□□□□ -0.53
RBFOX1-223ENST00000620507 ASXL1Q8IXJ9 1541 aa11.75□□□□□ -0.53
RBFOX1-223ENST00000620507 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
RBFOX1-223ENST00000620507 BACH2Q9BYV9 841 aa11.74□□□□□ -0.53
RBFOX1-223ENST00000620507 ABCC1P33527 1531 aa11.74□□□□□ -0.53
RBFOX1-223ENST00000620507 SOX12O15370 315 aa11.74□□□□□ -0.53
RBFOX1-223ENST00000620507 WWC1Q8IX03 1113 aa11.74□□□□□ -0.53
RBFOX1-223ENST00000620507 PAK3O75914 559 aaPredicted RBP11.73□□□□□ -0.53
RBFOX1-223ENST00000620507 CHMP4BQ9H444 224 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-223ENST00000620507 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
RBFOX1-223ENST00000620507 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-223ENST00000620507 ZCCHC11Q5TAX3 1644 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-223ENST00000620507 PDE3AQ14432 1141 aa11.72□□□□□ -0.53
RBFOX1-223ENST00000620507 ATP10AO60312 1499 aa11.72□□□□□ -0.53
RBFOX1-223ENST00000620507 RIPK4P57078 832 aa11.72□□□□□ -0.53
RBFOX1-223ENST00000620507 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
RBFOX1-223ENST00000620507 PLXNC1O60486 1568 aa11.72□□□□□ -0.53
RBFOX1-223ENST00000620507 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
RBFOX1-223ENST00000620507 IQGAP3Q86VI3 1631 aa11.7□□□□□ -0.54
RBFOX1-223ENST00000620507 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
RBFOX1-223ENST00000620507 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
RBFOX1-223ENST00000620507 WDR63Q8IWG1 891 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms