RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 NOP58Q9Y2X3 529 aaKnown RBP12.88□□□□□ -0.35
CDH23-213ENST00000619887 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
CDH23-213ENST00000619887 DISP3Q9P2K9 1392 aa12.88□□□□□ -0.35
CDH23-213ENST00000619887 TRHP20396 242 aaPredicted RBP12.88□□□□□ -0.35
CDH23-213ENST00000619887 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
CDH23-213ENST00000619887 COL17A1Q9UMD9 1497 aaPredicted RBP12.87□□□□□ -0.35
CDH23-213ENST00000619887 PARD3Q8TEW0 1356 aa12.87□□□□□ -0.35
CDH23-213ENST00000619887 STK26Q9P289 416 aa12.87□□□□□ -0.35
CDH23-213ENST00000619887 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
CDH23-213ENST00000619887 TERF2IPQ9NYB0 399 aa12.87□□□□□ -0.35
CDH23-213ENST00000619887 MS4A1P11836 297 aa12.86□□□□□ -0.35
CDH23-213ENST00000619887 SAFB2Q14151 953 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDH23-213ENST00000619887 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
CDH23-213ENST00000619887 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
CDH23-213ENST00000619887 ABCC1P33527 1531 aa12.86□□□□□ -0.35
CDH23-213ENST00000619887 ADAMTS8Q9UP79 889 aa12.86□□□□□ -0.35
CDH23-213ENST00000619887 E9PSI1 815 aa12.86□□□□□ -0.35
CDH23-213ENST00000619887 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
CDH23-213ENST00000619887 TESK2Q96S53 571 aa12.86□□□□□ -0.35
CDH23-213ENST00000619887 ZCCHC11Q5TAX3 1644 aaKnown RBP12.85□□□□□ -0.35
CDH23-213ENST00000619887 CDC42BPBQ9Y5S2 1711 aa12.85□□□□□ -0.35
CDH23-213ENST00000619887 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
CDH23-213ENST00000619887 UNC13BO14795 1591 aa12.85□□□□□ -0.35
CDH23-213ENST00000619887 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
CDH23-213ENST00000619887 IQGAP3Q86VI3 1631 aa12.83□□□□□ -0.36
CDH23-213ENST00000619887 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.36
CDH23-213ENST00000619887 A0A0G2JS52 829 aa12.83□□□□□ -0.36
CDH23-213ENST00000619887 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
CDH23-213ENST00000619887 SLC52A1Q9NWF4 448 aa12.83□□□□□ -0.36
CDH23-213ENST00000619887 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
CDH23-213ENST00000619887 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDH23-213ENST00000619887 SHROOM2Q13796 1616 aa12.82□□□□□ -0.36
CDH23-213ENST00000619887 APAF1O14727 1248 aa12.82□□□□□ -0.36
CDH23-213ENST00000619887 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
CDH23-213ENST00000619887 CYB5RLQ6IPT4 315 aa12.82□□□□□ -0.36
CDH23-213ENST00000619887 ATP10AO60312 1499 aa12.82□□□□□ -0.36
CDH23-213ENST00000619887 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
CDH23-213ENST00000619887 ERCC6L2Q5T890 1561 aa12.81□□□□□ -0.36
CDH23-213ENST00000619887 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
CDH23-213ENST00000619887 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
CDH23-213ENST00000619887 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
CDH23-213ENST00000619887 CRBNQ96SW2 442 aa12.8□□□□□ -0.36
CDH23-213ENST00000619887 ADGRF5Q8IZF2 1346 aa12.8□□□□□ -0.36
CDH23-213ENST00000619887 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
CDH23-213ENST00000619887 CENPQQ7L2Z9 268 aaPredicted RBP12.8□□□□□ -0.36
CDH23-213ENST00000619887 POLR1AO95602 1720 aaPredicted RBP12.79□□□□□ -0.36
CDH23-213ENST00000619887 PLIN1O60240 522 aa12.79□□□□□ -0.36
CDH23-213ENST00000619887 NBR1Q14596 966 aa12.79□□□□□ -0.36
CDH23-213ENST00000619887 TMEM132EQ6IEE7 984 aa12.79□□□□□ -0.36
CDH23-213ENST00000619887 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
CDH23-213ENST00000619887 INSRP06213 1382 aa12.79□□□□□ -0.36
CDH23-213ENST00000619887 RAPGEF3O95398 923 aa12.78□□□□□ -0.36
CDH23-213ENST00000619887 PLA2R1Q13018 1463 aa12.78□□□□□ -0.36
CDH23-213ENST00000619887 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
CDH23-213ENST00000619887 RUNDC1Q96C34 613 aa12.78□□□□□ -0.36
CDH23-213ENST00000619887 RGS3P49796 1198 aa12.77□□□□□ -0.36
CDH23-213ENST00000619887 ASXL1Q8IXJ9 1541 aa12.77□□□□□ -0.36
CDH23-213ENST00000619887 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.36
CDH23-213ENST00000619887 TRPM2O94759 1503 aa12.77□□□□□ -0.36
CDH23-213ENST00000619887 NOS1P29475 1434 aa12.77□□□□□ -0.36
CDH23-213ENST00000619887 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
CDH23-213ENST00000619887 SOX12O15370 315 aa12.77□□□□□ -0.37
CDH23-213ENST00000619887 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
CDH23-213ENST00000619887 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
CDH23-213ENST00000619887 PRDM15P57071 1507 aaPredicted RBP12.76□□□□□ -0.37
CDH23-213ENST00000619887 ZFYVE16Q7Z3T8 1539 aa12.75□□□□□ -0.37
CDH23-213ENST00000619887 TRPM1Q7Z4N2 1603 aa12.75□□□□□ -0.37
CDH23-213ENST00000619887 HSP90AA1P07900 732 aaKnown RBP12.75□□□□□ -0.37
CDH23-213ENST00000619887 C14orf93Q9H972 538 aaKnown RBP12.75□□□□□ -0.37
CDH23-213ENST00000619887 AMER1Q5JTC6 1135 aaPredicted RBP12.75□□□□□ -0.37
CDH23-213ENST00000619887 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
CDH23-213ENST00000619887 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
CDH23-213ENST00000619887 MINK1Q8N4C8 1332 aaPredicted RBP12.74□□□□□ -0.37
CDH23-213ENST00000619887 PTPRTO14522 1441 aa12.74□□□□□ -0.37
CDH23-213ENST00000619887 PDE4AP27815 886 aa12.74□□□□□ -0.37
CDH23-213ENST00000619887 BECN1Q14457 450 aa12.74□□□□□ -0.37
CDH23-213ENST00000619887 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
CDH23-213ENST00000619887 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
CDH23-213ENST00000619887 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
CDH23-213ENST00000619887 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
CDH23-213ENST00000619887 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
CDH23-213ENST00000619887 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDH23-213ENST00000619887 PIK3C2GO75747 1445 aa12.73□□□□□ -0.37
CDH23-213ENST00000619887 TET3O43151 1660 aa12.72□□□□□ -0.37
CDH23-213ENST00000619887 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
CDH23-213ENST00000619887 MAGI2Q86UL8 1455 aa12.72□□□□□ -0.37
CDH23-213ENST00000619887 MTHFSP49914 203 aa12.71□□□□□ -0.37
CDH23-213ENST00000619887 AAMPQ13685 434 aa12.71□□□□□ -0.37
CDH23-213ENST00000619887 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.37
CDH23-213ENST00000619887 CABP2Q9NPB3 220 aa12.71□□□□□ -0.37
CDH23-213ENST00000619887 RRP7AQ9Y3A4 280 aaKnown RBP12.71□□□□□ -0.37
CDH23-213ENST00000619887 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.37
CDH23-213ENST00000619887 LAMC1P11047 1609 aa12.71□□□□□ -0.38
CDH23-213ENST00000619887 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
CDH23-213ENST00000619887 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
CDH23-213ENST00000619887 POGZQ7Z3K3 1410 aa12.7□□□□□ -0.38
CDH23-213ENST00000619887 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
CDH23-213ENST00000619887 NSD2O96028 1365 aa12.69□□□□□ -0.38
CDH23-213ENST00000619887 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
CDH23-213ENST00000619887 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms