RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
SENP3-210ENST00000619785 CASKIN1Q8WXD9 1431 aa12.1□□□□□ -0.47
SENP3-210ENST00000619785 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
SENP3-210ENST00000619785 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
SENP3-210ENST00000619785 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
SENP3-210ENST00000619785 SYCP2Q9BX26 1530 aa12.09□□□□□ -0.47
SENP3-210ENST00000619785 DEPDC5O75140 1603 aa12.08□□□□□ -0.48
SENP3-210ENST00000619785 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.08□□□□□ -0.48
SENP3-210ENST00000619785 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
SENP3-210ENST00000619785 GPATCH8Q9UKJ3 1502 aaKnown RBP12.07□□□□□ -0.48
SENP3-210ENST00000619785 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
SENP3-210ENST00000619785 A2MP01023 1474 aa12.07□□□□□ -0.48
SENP3-210ENST00000619785 MED14O60244 1454 aa12.06□□□□□ -0.48
SENP3-210ENST00000619785 PLEKHH2Q8IVE3 1493 aa12.06□□□□□ -0.48
SENP3-210ENST00000619785 UBAP1LF5GYI3 381 aa12.05□□□□□ -0.48
SENP3-210ENST00000619785 PAK3O75914 559 aaPredicted RBP12.05□□□□□ -0.48
SENP3-210ENST00000619785 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
SENP3-210ENST00000619785 FYCO1Q9BQS8 1478 aa12.05□□□□□ -0.48
SENP3-210ENST00000619785 NCKAP5LQ9HCH0 1330 aa12.05□□□□□ -0.48
SENP3-210ENST00000619785 SHANK2Q9UPX8 1470 aa12.04□□□□□ -0.48
SENP3-210ENST00000619785 CCDC61Q9Y6R9 512 aa12.04□□□□□ -0.48
SENP3-210ENST00000619785 STRCP1A6NGW2 1772 aa12.04□□□□□ -0.48
SENP3-210ENST00000619785 RANGAP1P46060 587 aaPredicted RBP12.03□□□□□ -0.48
SENP3-210ENST00000619785 SYNMO15061 1565 aa12.03□□□□□ -0.48
SENP3-210ENST00000619785 NLRP6P59044 892 aa12.02□□□□□ -0.49
SENP3-210ENST00000619785 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
SENP3-210ENST00000619785 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
SENP3-210ENST00000619785 PZPP20742 1482 aa12.01□□□□□ -0.49
SENP3-210ENST00000619785 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
SENP3-210ENST00000619785 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
SENP3-210ENST00000619785 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
SENP3-210ENST00000619785 MBD5Q9P267 1494 aa12□□□□□ -0.49
SENP3-210ENST00000619785 IQGAP1P46940 1657 aa12□□□□□ -0.49
SENP3-210ENST00000619785 XIRP1Q702N8 1843 aaKnown RBP12□□□□□ -0.49
SENP3-210ENST00000619785 HSPA1LP34931 641 aa11.99□□□□□ -0.49
SENP3-210ENST00000619785 E2F4Q16254 413 aa11.99□□□□□ -0.49
SENP3-210ENST00000619785 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
SENP3-210ENST00000619785 KDM5DQ9BY66 1539 aa11.98□□□□□ -0.49
SENP3-210ENST00000619785 NLRP1Q9C000 1473 aa11.98□□□□□ -0.49
SENP3-210ENST00000619785 SOX12O15370 315 aa11.98□□□□□ -0.49
SENP3-210ENST00000619785 EFCAB3Q8N7B9 438 aa11.98□□□□□ -0.49
SENP3-210ENST00000619785 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
SENP3-210ENST00000619785 TIAM1Q13009 1591 aa11.96□□□□□ -0.49
SENP3-210ENST00000619785 TOM1O60784 492 aa11.96□□□□□ -0.49
SENP3-210ENST00000619785 PPP1R37O75864 691 aa11.96□□□□□ -0.49
SENP3-210ENST00000619785 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
SENP3-210ENST00000619785 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
SENP3-210ENST00000619785 LRRC7Q96NW7 1537 aa11.94□□□□□ -0.5
SENP3-210ENST00000619785 DHX29Q7Z478 1369 aaKnown RBP11.93□□□□□ -0.5
SENP3-210ENST00000619785 FBXO22Q8NEZ5 403 aa11.93□□□□□ -0.5
SENP3-210ENST00000619785 PHF8Q9UPP1 1060 aa11.93□□□□□ -0.5
SENP3-210ENST00000619785 TNRQ92752 1358 aa11.92□□□□□ -0.5
SENP3-210ENST00000619785 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
SENP3-210ENST00000619785 UBR1Q8IWV7 1749 aa11.92□□□□□ -0.5
SENP3-210ENST00000619785 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.5
SENP3-210ENST00000619785 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
SENP3-210ENST00000619785 MAP3K13O43283 966 aa11.91□□□□□ -0.5
SENP3-210ENST00000619785 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
SENP3-210ENST00000619785 NPHP4O75161 1426 aaPredicted RBP11.91□□□□□ -0.5
SENP3-210ENST00000619785 EIF2AK4Q9P2K8 1649 aaKnown RBP11.9□□□□□ -0.5
SENP3-210ENST00000619785 ARHGEF5Q12774 1597 aa11.9□□□□□ -0.5
SENP3-210ENST00000619785 ZC3H15Q8WU90 426 aaKnown RBP11.9□□□□□ -0.5
SENP3-210ENST00000619785 MIA2Q96PC5 1412 aa11.9□□□□□ -0.5
SENP3-210ENST00000619785 EHBP1L1Q8N3D4 1523 aa11.9□□□□□ -0.5
SENP3-210ENST00000619785 SEMA3EO15041 775 aa11.89□□□□□ -0.51
SENP3-210ENST00000619785 C14orf37Q86TY3 774 aa11.89□□□□□ -0.51
SENP3-210ENST00000619785 KDM5AP29375 1690 aaKnown RBP11.89□□□□□ -0.51
SENP3-210ENST00000619785 CAMSAP2Q08AD1 1489 aa11.89□□□□□ -0.51
SENP3-210ENST00000619785 SMYD5Q6GMV2 418 aa11.88□□□□□ -0.51
SENP3-210ENST00000619785 GGT6Q6P531 493 aa11.88□□□□□ -0.51
SENP3-210ENST00000619785 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
SENP3-210ENST00000619785 RGS17Q9UGC6 210 aaPredicted RBP11.88□□□□□ -0.51
SENP3-210ENST00000619785 MROH1Q8NDA8 1641 aa11.88□□□□□ -0.51
SENP3-210ENST00000619785 CCNB3Q8WWL7 1395 aa11.88□□□□□ -0.51
SENP3-210ENST00000619785 ARHGAP23Q9P227 1491 aa11.88□□□□□ -0.51
SENP3-210ENST00000619785 MAST1Q9Y2H9 1570 aa11.88□□□□□ -0.51
SENP3-210ENST00000619785 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
SENP3-210ENST00000619785 SLIT1O75093 1534 aa11.87□□□□□ -0.51
SENP3-210ENST00000619785 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
SENP3-210ENST00000619785 PDE4AP27815 886 aa11.87□□□□□ -0.51
SENP3-210ENST00000619785 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
SENP3-210ENST00000619785 ANKLE2Q86XL3 938 aa11.87□□□□□ -0.51
SENP3-210ENST00000619785 CFDP1Q9UEE9 299 aaPredicted RBP11.87□□□□□ -0.51
SENP3-210ENST00000619785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
SENP3-210ENST00000619785 CCDC141Q6ZP82 1450 aa11.87□□□□□ -0.51
SENP3-210ENST00000619785 THEMISQ8N1K5 641 aaPredicted RBP11.86□□□□□ -0.51
SENP3-210ENST00000619785 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
SENP3-210ENST00000619785 ABCC3O15438 1527 aa11.86□□□□□ -0.51
SENP3-210ENST00000619785 PIP4K2BP78356 416 aa11.85□□□□□ -0.51
SENP3-210ENST00000619785 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
SENP3-210ENST00000619785 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
SENP3-210ENST00000619785 FXR2P51116 673 aaKnown RBP eCLIP11.84□□□□□ -0.51
SENP3-210ENST00000619785 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
SENP3-210ENST00000619785 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
SENP3-210ENST00000619785 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
SENP3-210ENST00000619785 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
SENP3-210ENST00000619785 FAM135BQ49AJ0 1406 aa11.83□□□□□ -0.52
SENP3-210ENST00000619785 RSPH4AQ5TD94 716 aa11.82□□□□□ -0.52
SENP3-210ENST00000619785 CEP152O94986 1710 aa11.82□□□□□ -0.52
SENP3-210ENST00000619785 SLC24A3Q9HC58 644 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms