RNA–Protein interactions for RNA: ENST00000619533.1

CNTNAP4-208, Transcript of contactin associated protein like 4, human

Gene CNTNAP4, Length 1,856 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP4-208	ENST00000619533	LMTK2	Q8IWU2	1503 aa		9.28	□□□□□ -0.92
CNTNAP4-208	ENST00000619533	ADGRL2	O95490	1459 aa		9.28	□□□□□ -0.92
CNTNAP4-208	ENST00000619533	SOCS7	O14512	581 aa		9.28	□□□□□ -0.92
CNTNAP4-208	ENST00000619533	IDI1	Q13907	227 aa		9.28	□□□□□ -0.92
CNTNAP4-208	ENST00000619533	PIK3C2B	O00750	1634 aa		9.27	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	TMEM2	Q9UHN6	1383 aa		9.27	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	LRRC7	Q96NW7	1537 aa		9.27	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	EFCAB6	Q5THR3	1501 aa		9.26	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	BCAN	Q96GW7	911 aa		9.25	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	PCDH10	Q9P2E7	1040 aa		9.25	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	ANKRD50	Q9ULJ7	1429 aa		9.25	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	SYNM	O15061	1565 aa		9.25	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	SLC52A1	Q9NWF4	448 aa		9.25	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	TIMELESS	Q9UNS1	1208 aa		9.25	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	STRCP1	A6NGW2	1772 aa		9.25	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	NOS1	P29475	1434 aa		9.24	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	KCNA6	P17658	529 aa		9.23	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	ITGAE	P38570	1179 aa		9.23	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	HDGF	P51858	240 aa	Known RBP	9.23	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	SLC26A8	Q96RN1	970 aa		9.23	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	TAOK2	Q9UL54	1235 aa		9.23	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	KDM5A	P29375	1690 aa	Known RBP	9.22	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	ADGRB3	O60242	1522 aa		9.22	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	CHGA	P10645	457 aa	Known RBP	9.22	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	PROSER2	Q86WR7	435 aa	Predicted RBP	9.22	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	ALK	Q9UM73	1620 aa		9.22	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	RPRD2	Q5VT52	1461 aa	Known RBP	9.22	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	PPP1R15A	O75807	674 aa	Predicted RBP	9.21	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	PPARGC1B	Q86YN6	1023 aa	Known RBP	9.21	□□□□□ -0.93
CNTNAP4-208	ENST00000619533	MED1	Q15648	1581 aa	Predicted RBP	9.21	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	ROCK1	Q13464	1354 aa		9.21	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	TET3	O43151	1660 aa		9.2	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	TMEM94	Q12767	1356 aa		9.2	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	9.19	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	RIMS2	Q9UQ26	1411 aa		9.19	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	UNC13B	O14795	1591 aa		9.19	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	GCC2	Q8IWJ2	1684 aa		9.18	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	NUP155	O75694	1391 aa		9.18	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	PLEKHG1	Q9ULL1	1385 aa		9.18	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	RBM33	Q96EV2	1170 aa	Known RBP	9.18	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	XIRP1	Q702N8	1843 aa	Known RBP	9.17	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	ZFYVE9	O95405	1425 aa		9.16	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	FAM135B	Q49AJ0	1406 aa		9.16	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.16	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	TBX22	Q9Y458	520 aa		9.16	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	NKTR	P30414	1462 aa	Known RBP	9.16	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	TMEM131L	A2VDJ0	1609 aa		9.16	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	MSH6	P52701	1360 aa		9.16	□□□□□ -0.94
CNTNAP4-208	ENST00000619533		E9PCH4	1651 aa		9.15	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	IQGAP3	Q86VI3	1631 aa		9.15	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	NWD1	Q149M9	1564 aa		9.15	□□□□□ -0.94
CNTNAP4-208	ENST00000619533	C14orf37	Q86TY3	774 aa		9.15	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	MYO5B	Q9ULV0	1848 aa		9.15	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	SLAIN2	Q9P270	581 aa		9.13	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	TULP1	O00294	542 aa	Predicted RBP	9.13	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	ZNF326	Q5BKZ1	582 aa	Known RBP	9.13	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	CHD2	O14647	1828 aa	Known RBP	9.11	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	ROBO1	Q9Y6N7	1651 aa		9.11	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	ADAMTS13	Q76LX8	1427 aa		9.11	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	NCOA3	Q9Y6Q9	1424 aa		9.11	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	AMOTL2	Q9Y2J4	779 aa		9.11	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	PIK3R4	Q99570	1358 aa		9.11	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	DIP2A	Q14689	1571 aa		9.1	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	ATF3	P18847	181 aa		9.1	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	TRIM52	Q96A61	297 aa		9.09	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	TRPM2	O94759	1503 aa		9.09	□□□□□ -0.95
CNTNAP4-208	ENST00000619533	CADPS2	Q86UW7	1296 aa		9.08	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	C19orf44	Q9H6X5	657 aa		9.08	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	RRBP1	Q9P2E9	1410 aa	Known RBP	9.08	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	RGS17	Q9UGC6	210 aa	Predicted RBP	9.08	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	PHLPP1	O60346	1717 aa		9.08	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	SPHKAP	Q2M3C7	1700 aa		9.08	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	JCAD	Q9P266	1359 aa		9.07	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	NAIP	Q13075	1403 aa		9.07	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	PTPRU	Q92729	1446 aa		9.07	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	TPRN	Q4KMQ1	711 aa		9.06	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	9.05	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	SETBP1	Q9Y6X0	1596 aa		9.04	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	MEX3C	Q5U5Q3	659 aa	Known RBP	9.04	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	POTEA	Q6S8J7	498 aa		9.04	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	HOMEZ	Q8IX15	550 aa		9.04	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	CLTCL1	P53675	1640 aa		9.04	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	MET	P08581	1390 aa		9.04	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	VGF	O15240	615 aa	Predicted RBP	9.03	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	PLCB2	Q00722	1185 aa		9.03	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	BRINP3	Q76B58	766 aa		9.03	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	SPATA31A6	Q5VVP1	1343 aa		9.03	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	HFM1	A2PYH4	1435 aa		9.03	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	NRXN3	Q9Y4C0	1643 aa		9.03	□□□□□ -0.96
CNTNAP4-208	ENST00000619533	DCC	P43146	1447 aa		9.02	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	NEXMIF	Q5QGS0	1516 aa		9.02	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	COL16A1	Q07092	1604 aa	Predicted RBP	9.02	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	KIF1B	O60333	1816 aa		9.02	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	AHDC1	Q5TGY3	1603 aa	Predicted RBP	9.02	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	RPGRIP1L	Q68CZ1	1315 aa		9.02	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	XRN1	Q8IZH2	1706 aa	Known RBP	9.02	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.01	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	NUTM2E	B1AL46	878 aa	Predicted RBP	9.01	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.01	□□□□□ -0.97
CNTNAP4-208	ENST00000619533	PELP1	Q8IZL8	1130 aa	Known RBP	9	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms