RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 RIMBP3Q9UFD9 1639 aa13.82□□□□□ -0.2
TP53-225ENST00000619485 SPHKAPQ2M3C7 1700 aa13.81□□□□□ -0.2
TP53-225ENST00000619485 ABCA6Q8N139 1617 aa13.81□□□□□ -0.2
TP53-225ENST00000619485 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
TP53-225ENST00000619485 GGT6Q6P531 493 aa13.81□□□□□ -0.2
TP53-225ENST00000619485 PPRC1Q5VV67 1664 aaKnown RBP13.81□□□□□ -0.2
TP53-225ENST00000619485 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
TP53-225ENST00000619485 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
TP53-225ENST00000619485 EXOC6Q8TAG9 804 aa13.8□□□□□ -0.2
TP53-225ENST00000619485 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
TP53-225ENST00000619485 VWDEQ8N2E2 1590 aa13.8□□□□□ -0.2
TP53-225ENST00000619485 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
TP53-225ENST00000619485 RNF123Q5XPI4 1314 aa13.79□□□□□ -0.2
TP53-225ENST00000619485 NUTM2DQ5VT03 806 aaPredicted RBP13.79□□□□□ -0.2
TP53-225ENST00000619485 TSPOAP1O95153 1857 aa13.78□□□□□ -0.2
TP53-225ENST00000619485 MYBBP1AQ9BQG0 1328 aaKnown RBP13.78□□□□□ -0.2
TP53-225ENST00000619485 YEATS2Q9ULM3 1422 aa13.78□□□□□ -0.2
TP53-225ENST00000619485 TET3O43151 1660 aa13.78□□□□□ -0.2
TP53-225ENST00000619485 TRPM2O94759 1503 aa13.78□□□□□ -0.2
TP53-225ENST00000619485 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
TP53-225ENST00000619485 TESK2Q96S53 571 aa13.77□□□□□ -0.21
TP53-225ENST00000619485 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
TP53-225ENST00000619485 MADDQ8WXG6 1647 aa13.77□□□□□ -0.21
TP53-225ENST00000619485 ZNF518AQ6AHZ1 1483 aa13.76□□□□□ -0.21
TP53-225ENST00000619485 ARID4BQ4LE39 1312 aaPredicted RBP13.76□□□□□ -0.21
TP53-225ENST00000619485 ADGRF5Q8IZF2 1346 aa13.76□□□□□ -0.21
TP53-225ENST00000619485 PTPRTO14522 1441 aa13.75□□□□□ -0.21
TP53-225ENST00000619485 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
TP53-225ENST00000619485 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
TP53-225ENST00000619485 SIGLEC1Q9BZZ2 1709 aa13.74□□□□□ -0.21
TP53-225ENST00000619485 PLIN1O60240 522 aa13.74□□□□□ -0.21
TP53-225ENST00000619485 CHGAP10645 457 aaKnown RBP13.74□□□□□ -0.21
TP53-225ENST00000619485 RALBP1Q15311 655 aa13.74□□□□□ -0.21
TP53-225ENST00000619485 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
TP53-225ENST00000619485 CDCA7LQ96GN5 454 aa13.73□□□□□ -0.21
TP53-225ENST00000619485 HECW2Q9P2P5 1572 aa13.73□□□□□ -0.21
TP53-225ENST00000619485 CFAP70Q5T0N1 1121 aa13.73□□□□□ -0.21
TP53-225ENST00000619485 EFCAB6Q5THR3 1501 aa13.73□□□□□ -0.21
TP53-225ENST00000619485 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
TP53-225ENST00000619485 SLC4A2P04920 1241 aa13.72□□□□□ -0.21
TP53-225ENST00000619485 UBE2Q2Q8WVN8 375 aa13.72□□□□□ -0.21
TP53-225ENST00000619485 RNF17Q9BXT8 1623 aaKnown RBP13.72□□□□□ -0.21
TP53-225ENST00000619485 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
TP53-225ENST00000619485 FAM69CQ0P6D2 419 aa13.72□□□□□ -0.21
TP53-225ENST00000619485 SKAP1Q86WV1 359 aa13.71□□□□□ -0.21
TP53-225ENST00000619485 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
TP53-225ENST00000619485 NPATQ14207 1427 aa13.71□□□□□ -0.21
TP53-225ENST00000619485 DIP2CQ9Y2E4 1556 aa13.71□□□□□ -0.21
TP53-225ENST00000619485 NLRP13Q86W25 1043 aa13.71□□□□□ -0.21
TP53-225ENST00000619485 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
TP53-225ENST00000619485 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
TP53-225ENST00000619485 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.22
TP53-225ENST00000619485 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
TP53-225ENST00000619485 MAP3K4Q9Y6R4 1608 aa13.7□□□□□ -0.22
TP53-225ENST00000619485 KANK1Q14678 1352 aa13.7□□□□□ -0.22
TP53-225ENST00000619485 PDE4AP27815 886 aa13.69□□□□□ -0.22
TP53-225ENST00000619485 COL17A1Q9UMD9 1497 aaPredicted RBP13.69□□□□□ -0.22
TP53-225ENST00000619485 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
TP53-225ENST00000619485 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
TP53-225ENST00000619485 IQGAP1P46940 1657 aa13.67□□□□□ -0.22
TP53-225ENST00000619485 ABCC3O15438 1527 aa13.67□□□□□ -0.22
TP53-225ENST00000619485 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
TP53-225ENST00000619485 PANK3Q9H999 370 aa13.66□□□□□ -0.22
TP53-225ENST00000619485 WASHC2CQ9Y4E1 1318 aa13.66□□□□□ -0.22
TP53-225ENST00000619485 NOS1P29475 1434 aa13.66□□□□□ -0.22
TP53-225ENST00000619485 NEFMP07197 916 aa13.66□□□□□ -0.22
TP53-225ENST00000619485 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
TP53-225ENST00000619485 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
TP53-225ENST00000619485 CFAP74Q9C0B2 1584 aa13.65□□□□□ -0.22
TP53-225ENST00000619485 FBXO31Q5XUX0 539 aaPredicted RBP13.65□□□□□ -0.22
TP53-225ENST00000619485 SYNMO15061 1565 aa13.64□□□□□ -0.23
TP53-225ENST00000619485 CRBNQ96SW2 442 aa13.64□□□□□ -0.23
TP53-225ENST00000619485 KIF1BO60333 1816 aa13.64□□□□□ -0.23
TP53-225ENST00000619485 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
TP53-225ENST00000619485 LAMC1P11047 1609 aa13.63□□□□□ -0.23
TP53-225ENST00000619485 CAMSAP1Q5T5Y3 1602 aa13.63□□□□□ -0.23
TP53-225ENST00000619485 MLECQ14165 292 aa13.63□□□□□ -0.23
TP53-225ENST00000619485 BACH2Q9BYV9 841 aa13.63□□□□□ -0.23
TP53-225ENST00000619485 NEO1Q92859 1461 aa13.63□□□□□ -0.23
TP53-225ENST00000619485 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
TP53-225ENST00000619485 MYO5BQ9ULV0 1848 aa13.62□□□□□ -0.23
TP53-225ENST00000619485 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
TP53-225ENST00000619485 TPRNQ4KMQ1 711 aa13.61□□□□□ -0.23
TP53-225ENST00000619485 ADGRB3O60242 1522 aa13.61□□□□□ -0.23
TP53-225ENST00000619485 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
TP53-225ENST00000619485 C20orf194Q5TEA3 1177 aa13.6□□□□□ -0.23
TP53-225ENST00000619485 MYOM1P52179 1685 aa13.6□□□□□ -0.23
TP53-225ENST00000619485 TRAK1Q9UPV9 953 aa13.59□□□□□ -0.23
TP53-225ENST00000619485 SCAF11Q99590 1463 aaKnown RBP13.58□□□□□ -0.24
TP53-225ENST00000619485 SLC4A3P48751 1232 aa13.58□□□□□ -0.24
TP53-225ENST00000619485 IDI1Q13907 227 aa13.58□□□□□ -0.24
TP53-225ENST00000619485 PPLO60437 1756 aa13.58□□□□□ -0.24
TP53-225ENST00000619485 TMF1P82094 1093 aa13.57□□□□□ -0.24
TP53-225ENST00000619485 SAFB2Q14151 953 aaKnown RBP eCLIP13.57□□□□□ -0.24
TP53-225ENST00000619485 IL27Q8NEV9 243 aa13.57□□□□□ -0.24
TP53-225ENST00000619485 MS4A1P11836 297 aa13.57□□□□□ -0.24
TP53-225ENST00000619485 ADAMTS8Q9UP79 889 aa13.57□□□□□ -0.24
TP53-225ENST00000619485 KIF13AQ9H1H9 1805 aa13.56□□□□□ -0.24
TP53-225ENST00000619485 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
TP53-225ENST00000619485 GLI2P10070 1586 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms