RNA–Protein interactions for RNA: ENST00000619142.4

GTF2IRD2B-208, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD2B, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-208ENST00000619142 SLC52A1Q9NWF4 448 aa28.16■■■□□ 2.1
GTF2IRD2B-208ENST00000619142 PPLO60437 1756 aa28.16■■■□□ 2.1
GTF2IRD2B-208ENST00000619142 RPGRIP1LQ68CZ1 1315 aa28.15■■■□□ 2.1
GTF2IRD2B-208ENST00000619142 IQGAP1P46940 1657 aa28.14■■■□□ 2.1
GTF2IRD2B-208ENST00000619142 CLTCQ00610 1675 aaKnown RBP28.14■■■□□ 2.1
GTF2IRD2B-208ENST00000619142 ADGRF5Q8IZF2 1346 aa28.13■■■□□ 2.09
GTF2IRD2B-208ENST00000619142 ERVK-7P63135 1459 aa28.1■■■□□ 2.09
GTF2IRD2B-208ENST00000619142 IDI1Q13907 227 aa28.1■■■□□ 2.09
GTF2IRD2B-208ENST00000619142 SCAF11Q99590 1463 aaKnown RBP28.09■■■□□ 2.09
GTF2IRD2B-208ENST00000619142 POLR3GLQ9BT43 218 aa28.08■■■□□ 2.09
GTF2IRD2B-208ENST00000619142 MLECQ14165 292 aa28.07■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 TESK2Q96S53 571 aa28.07■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 CFAP70Q5T0N1 1121 aa28.05■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 FBXO31Q5XUX0 539 aaPredicted RBP28.05■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 PIK3C2GO75747 1445 aa28.04■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 NEXMIFQ5QGS0 1516 aa28.04■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 TMEM131LA2VDJ0 1609 aa28.03■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 SPATA31D1Q6ZQQ2 1576 aa28.02■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 SETBP1Q9Y6X0 1596 aa28.02■■■□□ 2.08
GTF2IRD2B-208ENST00000619142 EIF3AQ14152 1382 aaKnown RBP28.01■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 MYO5BQ9ULV0 1848 aa28■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 ESF1Q9H501 851 aaKnown RBP28■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 VGFO15240 615 aaPredicted RBP27.99■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 TMF1P82094 1093 aa27.99■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 PRKRIP1Q9H875 184 aaPredicted RBP27.98■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 DISP3Q9P2K9 1392 aa27.98■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 ZFYVE9O95405 1425 aa27.97■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 C14orf93Q9H972 538 aaKnown RBP27.97■■■□□ 2.07
GTF2IRD2B-208ENST00000619142 ZMYM3Q14202 1370 aa27.94■■■□□ 2.06
GTF2IRD2B-208ENST00000619142 ADGRB1O14514 1584 aa27.9■■■□□ 2.06
GTF2IRD2B-208ENST00000619142 MYO3AQ8NEV4 1616 aa27.89■■■□□ 2.06
GTF2IRD2B-208ENST00000619142 SLC24A1O60721 1099 aa27.89■■■□□ 2.06
GTF2IRD2B-208ENST00000619142 CDCA8Q53HL2 280 aa27.87■■■□□ 2.05
GTF2IRD2B-208ENST00000619142 NUTM2DQ5VT03 806 aaPredicted RBP27.87■■■□□ 2.05
GTF2IRD2B-208ENST00000619142 STAG3Q9UJ98 1225 aa27.87■■■□□ 2.05
GTF2IRD2B-208ENST00000619142 A2ML1A8K2U0 1454 aa27.84■■■□□ 2.05
GTF2IRD2B-208ENST00000619142 SBNO2Q9Y2G9 1366 aa27.82■■■□□ 2.04
GTF2IRD2B-208ENST00000619142 TMEM132EQ6IEE7 984 aa27.8■■■□□ 2.04
GTF2IRD2B-208ENST00000619142 CENPJQ9HC77 1338 aaPredicted RBP27.79■■■□□ 2.04
GTF2IRD2B-208ENST00000619142 TNRQ92752 1358 aa27.78■■■□□ 2.04
GTF2IRD2B-208ENST00000619142 KTN1Q86UP2 1357 aaKnown RBP27.78■■■□□ 2.04
GTF2IRD2B-208ENST00000619142 TRAK1Q9UPV9 953 aa27.78■■■□□ 2.04
GTF2IRD2B-208ENST00000619142 KDM5AP29375 1690 aaKnown RBP27.77■■■□□ 2.04
GTF2IRD2B-208ENST00000619142 PER1O15534 1290 aaPredicted RBP27.76■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 RIMS2Q9UQ26 1411 aa27.75■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 QRICH2Q9H0J4 1663 aa27.74■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 CCDC184Q52MB2 194 aa27.74■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 PANK3Q9H999 370 aa27.74■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 ARHGEF28Q8N1W1 1705 aaKnown RBP27.73■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 ASXL1Q8IXJ9 1541 aa27.73■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 MRS2Q9HD23 443 aa27.73■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 FER1L4A9Z1Z3 1794 aa27.72■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 RALBP1Q15311 655 aa27.72■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 MYOM1P52179 1685 aa27.71■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 ALKQ9UM73 1620 aa27.7■■■□□ 2.03
GTF2IRD2B-208ENST00000619142 CNGB1Q14028 1251 aaPredicted RBP27.69■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.69■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 C3P01024 1663 aa27.68■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 UBR1Q8IWV7 1749 aa27.67■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 SCAF1Q9H7N4 1312 aaKnown RBP27.65■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 NLRP1Q9C000 1473 aa27.65■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 PARD3Q8TEW0 1356 aa27.65■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 MYBBP1AQ9BQG0 1328 aaKnown RBP27.64■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 HDGFP51858 240 aaKnown RBP27.64■■■□□ 2.02
GTF2IRD2B-208ENST00000619142 YTHDC2Q9H6S0 1430 aaKnown RBP27.63■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 CEBPAP49715 358 aaPredicted RBP27.62■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 SENP3Q9H4L4 574 aaPredicted RBP27.62■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 SETD1AO15047 1707 aaKnown RBP27.61■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 STK26Q9P289 416 aa27.59■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 KNSTRNQ9Y448 316 aa27.59■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 TMEM2Q9UHN6 1383 aa27.59■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 PTPRMP28827 1452 aa27.58■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 BRD4O60885 1362 aaPredicted RBP27.58■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 FAM9BQ8IZU0 186 aa27.58■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 PUS7Q96PZ0 661 aaKnown RBP27.58■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 NRXN3Q9Y4C0 1643 aa27.58■■■□□ 2.01
GTF2IRD2B-208ENST00000619142 GTF3C3Q9Y5Q9 886 aa27.57■■■□□ 2
GTF2IRD2B-208ENST00000619142 EVC2Q86UK5 1308 aa27.56■■■□□ 2
GTF2IRD2B-208ENST00000619142 CC2D1BQ5T0F9 858 aaKnown RBP27.55■■■□□ 2
GTF2IRD2B-208ENST00000619142 TMC1Q8TDI8 760 aa27.55■■■□□ 2
GTF2IRD2B-208ENST00000619142 HNRNPUQ00839 825 aaKnown RBP eCLIP27.55■■■□□ 2
GTF2IRD2B-208ENST00000619142 TULP4Q9NRJ4 1543 aa27.54■■■□□ 2
GTF2IRD2B-208ENST00000619142 NLRP13Q86W25 1043 aa27.53■■■□□ 2
GTF2IRD2B-208ENST00000619142 DLC1Q96QB1 1528 aa27.53■■■□□ 2
GTF2IRD2B-208ENST00000619142 LRPPRCP42704 1394 aaKnown RBP27.52■■■□□ 2
GTF2IRD2B-208ENST00000619142 NPC1L1Q9UHC9 1359 aa27.52■■■□□ 2
GTF2IRD2B-208ENST00000619142 AMER1Q5JTC6 1135 aaPredicted RBP27.52■■■□□ 2
GTF2IRD2B-208ENST00000619142 PRAM1Q96QH2 718 aa27.5■■□□□ 1.99
GTF2IRD2B-208ENST00000619142 POGKQ9P215 609 aa27.49■■□□□ 1.99
GTF2IRD2B-208ENST00000619142 PNISRQ8TF01 805 aaKnown RBP27.49■■□□□ 1.99
GTF2IRD2B-208ENST00000619142 SAFB2Q14151 953 aaKnown RBP eCLIP27.48■■□□□ 1.99
GTF2IRD2B-208ENST00000619142 ABCC11Q96J66 1382 aa27.48■■□□□ 1.99
GTF2IRD2B-208ENST00000619142 RIMS1Q86UR5 1692 aaKnown RBP27.47■■□□□ 1.99
GTF2IRD2B-208ENST00000619142 PLPPR3Q6T4P5 718 aa27.46■■□□□ 1.99
GTF2IRD2B-208ENST00000619142 SLIT1O75093 1534 aa27.46■■□□□ 1.99
GTF2IRD2B-208ENST00000619142 ARHGAP23Q9P227 1491 aa27.44■■□□□ 1.98
GTF2IRD2B-208ENST00000619142 METP08581 1390 aa27.44■■□□□ 1.98
GTF2IRD2B-208ENST00000619142 PLEKHG1Q9ULL1 1385 aa27.44■■□□□ 1.98
GTF2IRD2B-208ENST00000619142 CARD14Q9BXL6 1004 aa27.43■■□□□ 1.98
GTF2IRD2B-208ENST00000619142 ADAMTSL3P82987 1691 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms