RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 CHGAP10645 457 aaKnown RBP34.98■■■■□ 3.19
VEGFC-202ENST00000618562 IQGAP1P46940 1657 aa34.98■■■■□ 3.19
VEGFC-202ENST00000618562 PPP6R1Q9UPN7 881 aa34.97■■■■□ 3.19
VEGFC-202ENST00000618562 NRXN1Q9ULB1 1477 aa34.97■■■■□ 3.19
VEGFC-202ENST00000618562 ADGRF5Q8IZF2 1346 aa34.96■■■■□ 3.19
VEGFC-202ENST00000618562 CLTCQ00610 1675 aaKnown RBP34.96■■■■□ 3.19
VEGFC-202ENST00000618562 POLR3GLQ9BT43 218 aa34.91■■■■□ 3.18
VEGFC-202ENST00000618562 TESK2Q96S53 571 aa34.89■■■■□ 3.18
VEGFC-202ENST00000618562 IDI1Q13907 227 aa34.88■■■■□ 3.17
VEGFC-202ENST00000618562 ERVK-7P63135 1459 aa34.88■■■■□ 3.17
VEGFC-202ENST00000618562 MLECQ14165 292 aa34.87■■■■□ 3.17
VEGFC-202ENST00000618562 SLC52A1Q9NWF4 448 aa34.87■■■■□ 3.17
VEGFC-202ENST00000618562 RPGRIP1LQ68CZ1 1315 aa34.87■■■■□ 3.17
VEGFC-202ENST00000618562 SCAF11Q99590 1463 aaKnown RBP34.86■■■■□ 3.17
VEGFC-202ENST00000618562 FBXO31Q5XUX0 539 aaPredicted RBP34.86■■■■□ 3.17
VEGFC-202ENST00000618562 CFAP70Q5T0N1 1121 aa34.85■■■■□ 3.17
VEGFC-202ENST00000618562 MYO5BQ9ULV0 1848 aa34.83■■■■□ 3.17
VEGFC-202ENST00000618562 NEXMIFQ5QGS0 1516 aa34.83■■■■□ 3.17
VEGFC-202ENST00000618562 PIK3C2GO75747 1445 aa34.82■■■■□ 3.17
VEGFC-202ENST00000618562 TMEM131LA2VDJ0 1609 aa34.81■■■■□ 3.16
VEGFC-202ENST00000618562 TRHP20396 242 aaPredicted RBP34.8■■■■□ 3.16
VEGFC-202ENST00000618562 DISP3Q9P2K9 1392 aa34.8■■■■□ 3.16
VEGFC-202ENST00000618562 SPATA31D1Q6ZQQ2 1576 aa34.78■■■■□ 3.16
VEGFC-202ENST00000618562 PRKRIP1Q9H875 184 aaPredicted RBP34.77■■■■□ 3.16
VEGFC-202ENST00000618562 SETBP1Q9Y6X0 1596 aa34.76■■■■□ 3.15
VEGFC-202ENST00000618562 TMF1P82094 1093 aa34.71■■■■□ 3.15
VEGFC-202ENST00000618562 C14orf93Q9H972 538 aaKnown RBP34.71■■■■□ 3.15
VEGFC-202ENST00000618562 EIF3AQ14152 1382 aaKnown RBP34.71■■■■□ 3.15
VEGFC-202ENST00000618562 VGFO15240 615 aaPredicted RBP34.69■■■■□ 3.14
VEGFC-202ENST00000618562 ADGRB1O14514 1584 aa34.68■■■■□ 3.14
VEGFC-202ENST00000618562 ZFYVE9O95405 1425 aa34.67■■■■□ 3.14
VEGFC-202ENST00000618562 NUTM2DQ5VT03 806 aaPredicted RBP34.67■■■■□ 3.14
VEGFC-202ENST00000618562 ZMYM3Q14202 1370 aa34.67■■■■□ 3.14
VEGFC-202ENST00000618562 NEFLP07196 543 aa34.67■■■■□ 3.14
VEGFC-202ENST00000618562 DNAJC5Q9H3Z4 198 aa34.67■■■■□ 3.14
VEGFC-202ENST00000618562 FKBP8Q14318 412 aa34.66■■■■□ 3.14
VEGFC-202ENST00000618562 ESF1Q9H501 851 aaKnown RBP34.66■■■■□ 3.14
VEGFC-202ENST00000618562 HNRNPUQ00839 825 aaKnown RBP eCLIP34.63■■■■□ 3.13
VEGFC-202ENST00000618562 MYO3AQ8NEV4 1616 aa34.63■■■■□ 3.13
VEGFC-202ENST00000618562 CCDC184Q52MB2 194 aa34.57■■■■□ 3.12
VEGFC-202ENST00000618562 A2ML1A8K2U0 1454 aa34.57■■■■□ 3.12
VEGFC-202ENST00000618562 TMEM132EQ6IEE7 984 aa34.55■■■■□ 3.12
VEGFC-202ENST00000618562 STAG3Q9UJ98 1225 aa34.54■■■■□ 3.12
VEGFC-202ENST00000618562 SBNO2Q9Y2G9 1366 aa34.51■■■■□ 3.11
VEGFC-202ENST00000618562 CDCA8Q53HL2 280 aa34.5■■■■□ 3.11
VEGFC-202ENST00000618562 TRAK1Q9UPV9 953 aa34.5■■■■□ 3.11
VEGFC-202ENST00000618562 PER1O15534 1290 aaPredicted RBP34.5■■■■□ 3.11
VEGFC-202ENST00000618562 CNGB1Q14028 1251 aaPredicted RBP34.5■■■■□ 3.11
VEGFC-202ENST00000618562 KDM5AP29375 1690 aaKnown RBP34.49■■■■□ 3.11
VEGFC-202ENST00000618562 ASXL1Q8IXJ9 1541 aa34.48■■■■□ 3.11
VEGFC-202ENST00000618562 MRS2Q9HD23 443 aa34.48■■■■□ 3.11
VEGFC-202ENST00000618562 CENPJQ9HC77 1338 aaPredicted RBP34.48■■■■□ 3.11
VEGFC-202ENST00000618562 MYOM1P52179 1685 aa34.48■■■■□ 3.11
VEGFC-202ENST00000618562 QRICH2Q9H0J4 1663 aa34.48■■■■□ 3.11
VEGFC-202ENST00000618562 SLC24A1O60721 1099 aa34.46■■■■□ 3.11
VEGFC-202ENST00000618562 PANK3Q9H999 370 aa34.46■■■■□ 3.11
VEGFC-202ENST00000618562 ARHGEF28Q8N1W1 1705 aaKnown RBP34.46■■■■□ 3.11
VEGFC-202ENST00000618562 TNRQ92752 1358 aa34.46■■■■□ 3.11
VEGFC-202ENST00000618562 BCANQ96GW7 911 aa34.45■■■■□ 3.11
VEGFC-202ENST00000618562 RIMS2Q9UQ26 1411 aa34.43■■■■□ 3.1
VEGFC-202ENST00000618562 SENP3Q9H4L4 574 aaPredicted RBP34.42■■■■□ 3.1
VEGFC-202ENST00000618562 KTN1Q86UP2 1357 aaKnown RBP34.41■■■■□ 3.1
VEGFC-202ENST00000618562 FER1L4A9Z1Z3 1794 aa34.41■■■■□ 3.1
VEGFC-202ENST00000618562 ALKQ9UM73 1620 aa34.41■■■■□ 3.1
VEGFC-202ENST00000618562 C3P01024 1663 aa34.38■■■■□ 3.09
VEGFC-202ENST00000618562 TSHZ2Q9NRE2 1034 aa34.38■■■■□ 3.09
VEGFC-202ENST00000618562 RALBP1Q15311 655 aa34.37■■■■□ 3.09
VEGFC-202ENST00000618562 ZBED9Q6R2W3 1325 aa34.36■■■■□ 3.09
VEGFC-202ENST00000618562 UBR1Q8IWV7 1749 aa34.36■■■■□ 3.09
VEGFC-202ENST00000618562 PARD3Q8TEW0 1356 aa34.35■■■■□ 3.09
VEGFC-202ENST00000618562 FAM9BQ8IZU0 186 aa34.35■■■■□ 3.09
VEGFC-202ENST00000618562 CEBPAP49715 358 aaPredicted RBP34.33■■■■□ 3.09
VEGFC-202ENST00000618562 SETD1AO15047 1707 aaKnown RBP34.32■■■■□ 3.08
VEGFC-202ENST00000618562 MYBBP1AQ9BQG0 1328 aaKnown RBP34.31■■■■□ 3.08
VEGFC-202ENST00000618562 YTHDC2Q9H6S0 1430 aaKnown RBP34.3■■■■□ 3.08
VEGFC-202ENST00000618562 PTPRMP28827 1452 aa34.29■■■■□ 3.08
VEGFC-202ENST00000618562 NRXN3Q9Y4C0 1643 aa34.28■■■■□ 3.08
VEGFC-202ENST00000618562 STK26Q9P289 416 aa34.28■■■■□ 3.08
VEGFC-202ENST00000618562 NLRP1Q9C000 1473 aa34.28■■■■□ 3.08
VEGFC-202ENST00000618562 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.27■■■■□ 3.08
VEGFC-202ENST00000618562 CC2D1BQ5T0F9 858 aaKnown RBP34.25■■■■□ 3.07
VEGFC-202ENST00000618562 TULP4Q9NRJ4 1543 aa34.24■■■■□ 3.07
VEGFC-202ENST00000618562 TMEM2Q9UHN6 1383 aa34.23■■■■□ 3.07
VEGFC-202ENST00000618562 BRD4O60885 1362 aaPredicted RBP34.23■■■■□ 3.07
VEGFC-202ENST00000618562 ERICH6BQ5W0A0 696 aa34.22■■■■□ 3.07
VEGFC-202ENST00000618562 KNSTRNQ9Y448 316 aa34.22■■■■□ 3.07
VEGFC-202ENST00000618562 AMER1Q5JTC6 1135 aaPredicted RBP34.19■■■■□ 3.06
VEGFC-202ENST00000618562 TMC1Q8TDI8 760 aa34.19■■■■□ 3.06
VEGFC-202ENST00000618562 HDGFP51858 240 aaKnown RBP34.18■■■■□ 3.06
VEGFC-202ENST00000618562 SAFB2Q14151 953 aaKnown RBP eCLIP34.17■■■■□ 3.06
VEGFC-202ENST00000618562 EVC2Q86UK5 1308 aa34.17■■■■□ 3.06
VEGFC-202ENST00000618562 NLRP13Q86W25 1043 aa34.16■■■■□ 3.06
VEGFC-202ENST00000618562 PNISRQ8TF01 805 aaKnown RBP34.15■■■■□ 3.06
VEGFC-202ENST00000618562 PRAM1Q96QH2 718 aa34.15■■■■□ 3.06
VEGFC-202ENST00000618562 DLC1Q96QB1 1528 aa34.14■■■■□ 3.06
VEGFC-202ENST00000618562 LRPPRCP42704 1394 aaKnown RBP34.14■■■■□ 3.06
VEGFC-202ENST00000618562 PLPPR3Q6T4P5 718 aa34.14■■■■□ 3.06
VEGFC-202ENST00000618562 PUS7Q96PZ0 661 aaKnown RBP34.14■■■■□ 3.06
VEGFC-202ENST00000618562 NPC1L1Q9UHC9 1359 aa34.12■■■■□ 3.05
VEGFC-202ENST00000618562 CARD14Q9BXL6 1004 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms