RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 NEFMP07197 916 aa26.76■■□□□ 1.87
NEK3-208ENST00000618534 SCAF11Q99590 1463 aaKnown RBP26.76■■□□□ 1.87
NEK3-208ENST00000618534 TRPM2O94759 1503 aa26.76■■□□□ 1.87
NEK3-208ENST00000618534 ASXL1Q8IXJ9 1541 aa26.75■■□□□ 1.87
NEK3-208ENST00000618534 EFCAB2Q5VUJ9 269 aa26.75■■□□□ 1.87
NEK3-208ENST00000618534 CEP152O94986 1710 aa26.74■■□□□ 1.87
NEK3-208ENST00000618534 GOLGA2Q08379 1002 aa26.74■■□□□ 1.87
NEK3-208ENST00000618534 MYOM1P52179 1685 aa26.73■■□□□ 1.87
NEK3-208ENST00000618534 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
NEK3-208ENST00000618534 CDCA8Q53HL2 280 aa26.73■■□□□ 1.87
NEK3-208ENST00000618534 PIK3C2GO75747 1445 aa26.72■■□□□ 1.87
NEK3-208ENST00000618534 SCAPERQ9BY12 1400 aa26.72■■□□□ 1.87
NEK3-208ENST00000618534 CLTCL1P53675 1640 aa26.72■■□□□ 1.87
NEK3-208ENST00000618534 CENPQQ7L2Z9 268 aaPredicted RBP26.71■■□□□ 1.87
NEK3-208ENST00000618534 DDRGK1Q96HY6 314 aa26.7■■□□□ 1.87
NEK3-208ENST00000618534 ZCCHC11Q5TAX3 1644 aaKnown RBP26.7■■□□□ 1.86
NEK3-208ENST00000618534 USP35Q9P2H5 1018 aa26.7■■□□□ 1.86
NEK3-208ENST00000618534 PPM1GO15355 546 aaPredicted RBP26.68■■□□□ 1.86
NEK3-208ENST00000618534 PTPRTO14522 1441 aa26.68■■□□□ 1.86
NEK3-208ENST00000618534 SLFN5Q08AF3 891 aa26.67■■□□□ 1.86
NEK3-208ENST00000618534 CCDC146Q8IYE0 955 aa26.67■■□□□ 1.86
NEK3-208ENST00000618534 SPAG9O60271 1321 aaKnown RBP26.66■■□□□ 1.86
NEK3-208ENST00000618534 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.66■■□□□ 1.86
NEK3-208ENST00000618534 NPC1L1Q9UHC9 1359 aa26.65■■□□□ 1.86
NEK3-208ENST00000618534 ZFYVE16Q7Z3T8 1539 aa26.65■■□□□ 1.86
NEK3-208ENST00000618534 KDM5AP29375 1690 aaKnown RBP26.63■■□□□ 1.85
NEK3-208ENST00000618534 AFAP1Q8N556 730 aa26.63■■□□□ 1.85
NEK3-208ENST00000618534 STAC3Q96MF2 364 aa26.63■■□□□ 1.85
NEK3-208ENST00000618534 EIF3AQ14152 1382 aaKnown RBP26.62■■□□□ 1.85
NEK3-208ENST00000618534 DEPDC5O75140 1603 aa26.62■■□□□ 1.85
NEK3-208ENST00000618534 TRMT2AQ8IZ69 625 aaKnown RBP26.61■■□□□ 1.85
NEK3-208ENST00000618534 SPINK5Q9NQ38 1064 aaPredicted RBP26.61■■□□□ 1.85
NEK3-208ENST00000618534 TET3O43151 1660 aa26.61■■□□□ 1.85
NEK3-208ENST00000618534 RTEL1-TNFRSF6BF6WH68 1400 aa26.6■■□□□ 1.85
NEK3-208ENST00000618534 APAF1O14727 1248 aa26.59■■□□□ 1.85
NEK3-208ENST00000618534 FAM161AQ3B820 660 aa26.59■■□□□ 1.85
NEK3-208ENST00000618534 C8orf34Q49A92 452 aa26.59■■□□□ 1.85
NEK3-208ENST00000618534 KIAA1210Q9ULL0 1709 aa26.59■■□□□ 1.85
NEK3-208ENST00000618534 NKTRP30414 1462 aaKnown RBP26.57■■□□□ 1.84
NEK3-208ENST00000618534 SLC4A3P48751 1232 aa26.57■■□□□ 1.84
NEK3-208ENST00000618534 UHRF1BP1LA0JNW5 1464 aa26.54■■□□□ 1.84
NEK3-208ENST00000618534 ERVK-7P63135 1459 aa26.54■■□□□ 1.84
NEK3-208ENST00000618534 BCAR3O75815 825 aa26.54■■□□□ 1.84
NEK3-208ENST00000618534 RGS3P49796 1198 aa26.54■■□□□ 1.84
NEK3-208ENST00000618534 CFAP70Q5T0N1 1121 aa26.53■■□□□ 1.84
NEK3-208ENST00000618534 ABCA6Q8N139 1617 aa26.52■■□□□ 1.84
NEK3-208ENST00000618534 VWDEQ8N2E2 1590 aa26.52■■□□□ 1.84
NEK3-208ENST00000618534 KANK1Q14678 1352 aa26.51■■□□□ 1.83
NEK3-208ENST00000618534 DMRT2Q9Y5R5 561 aa26.51■■□□□ 1.83
NEK3-208ENST00000618534 MAP3K4Q9Y6R4 1608 aa26.51■■□□□ 1.83
NEK3-208ENST00000618534 CARD14Q9BXL6 1004 aa26.5■■□□□ 1.83
NEK3-208ENST00000618534 UGGT1Q9NYU2 1555 aa26.5■■□□□ 1.83
NEK3-208ENST00000618534 ARAP3Q8WWN8 1544 aa26.5■■□□□ 1.83
NEK3-208ENST00000618534 E9PSI1 815 aa26.5■■□□□ 1.83
NEK3-208ENST00000618534 IL27Q8NEV9 243 aa26.5■■□□□ 1.83
NEK3-208ENST00000618534 DAXXQ9UER7 740 aaPredicted RBP26.49■■□□□ 1.83
NEK3-208ENST00000618534 ATP7AQ04656 1500 aa26.49■■□□□ 1.83
NEK3-208ENST00000618534 NFKBIBQ15653 356 aa26.48■■□□□ 1.83
NEK3-208ENST00000618534 NEURL4Q96JN8 1562 aa26.48■■□□□ 1.83
NEK3-208ENST00000618534 INO80Q9ULG1 1556 aaPredicted RBP26.48■■□□□ 1.83
NEK3-208ENST00000618534 ADGRF5Q8IZF2 1346 aa26.48■■□□□ 1.83
NEK3-208ENST00000618534 MYOM2P54296 1465 aa26.47■■□□□ 1.83
NEK3-208ENST00000618534 KIF3BO15066 747 aa26.47■■□□□ 1.83
NEK3-208ENST00000618534 MROH1Q8NDA8 1641 aa26.43■■□□□ 1.82
NEK3-208ENST00000618534 SLC24A1O60721 1099 aa26.42■■□□□ 1.82
NEK3-208ENST00000618534 IGHDP01880 384 aa26.41■■□□□ 1.82
NEK3-208ENST00000618534 IFT172Q9UG01 1749 aa26.41■■□□□ 1.82
NEK3-208ENST00000618534 KIF1BO60333 1816 aa26.41■■□□□ 1.82
NEK3-208ENST00000618534 FANCAO15360 1455 aa26.4■■□□□ 1.82
NEK3-208ENST00000618534 NGEFQ8N5V2 710 aa26.4■■□□□ 1.82
NEK3-208ENST00000618534 MROH2AA6NES4 1674 aa26.39■■□□□ 1.82
NEK3-208ENST00000618534 ABCA9Q8IUA7 1624 aa26.39■■□□□ 1.82
NEK3-208ENST00000618534 POLR3AO14802 1390 aaPredicted RBP26.39■■□□□ 1.81
NEK3-208ENST00000618534 MYO3AQ8NEV4 1616 aa26.39■■□□□ 1.81
NEK3-208ENST00000618534 CENPJQ9HC77 1338 aaPredicted RBP26.38■■□□□ 1.81
NEK3-208ENST00000618534 GSE1Q14687 1217 aa26.38■■□□□ 1.81
NEK3-208ENST00000618534 WWC1Q8IX03 1113 aa26.38■■□□□ 1.81
NEK3-208ENST00000618534 VIRMAQ69YN4 1812 aaKnown RBP26.38■■□□□ 1.81
NEK3-208ENST00000618534 CGNL1Q0VF96 1302 aa26.37■■□□□ 1.81
NEK3-208ENST00000618534 PDE3AQ14432 1141 aa26.37■■□□□ 1.81
NEK3-208ENST00000618534 EFCAB6Q5THR3 1501 aa26.36■■□□□ 1.81
NEK3-208ENST00000618534 PANK1Q8TE04 598 aa26.35■■□□□ 1.81
NEK3-208ENST00000618534 SHPRHQ149N8 1683 aa26.35■■□□□ 1.81
NEK3-208ENST00000618534 NRXN1Q9ULB1 1477 aa26.34■■□□□ 1.81
NEK3-208ENST00000618534 SBNO2Q9Y2G9 1366 aa26.34■■□□□ 1.81
NEK3-208ENST00000618534 NINLQ9Y2I6 1382 aa26.34■■□□□ 1.81
NEK3-208ENST00000618534 CANXP27824 592 aaKnown RBP26.34■■□□□ 1.81
NEK3-208ENST00000618534 RTN4Q9NQC3 1192 aaKnown RBP26.34■■□□□ 1.81
NEK3-208ENST00000618534 CLUAP1Q96AJ1 413 aa26.34■■□□□ 1.81
NEK3-208ENST00000618534 COG6Q9Y2V7 657 aa26.34■■□□□ 1.81
NEK3-208ENST00000618534 ADGRL1O94910 1474 aa26.33■■□□□ 1.81
NEK3-208ENST00000618534 NSD3Q9BZ95 1437 aa26.33■■□□□ 1.8
NEK3-208ENST00000618534 PPRC1Q5VV67 1664 aaKnown RBP26.32■■□□□ 1.8
NEK3-208ENST00000618534 NOS1P29475 1434 aa26.3■■□□□ 1.8
NEK3-208ENST00000618534 TNNT2P45379 298 aaPredicted RBP26.3■■□□□ 1.8
NEK3-208ENST00000618534 USP19O94966 1318 aa26.3■■□□□ 1.8
NEK3-208ENST00000618534 NEUROD2Q15784 382 aa26.29■■□□□ 1.8
NEK3-208ENST00000618534 MORC1Q86VD1 984 aa26.29■■□□□ 1.8
NEK3-208ENST00000618534 FRAT1Q92837 279 aaPredicted RBP26.29■■□□□ 1.8
NEK3-208ENST00000618534 RRP7AQ9Y3A4 280 aaKnown RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms