RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CCDC43Q96MW1 224 aaKnown RBP4.29□□□□□ -1.72
LPP-220ENST00000617246 PPM1GO15355 546 aaPredicted RBP4.29□□□□□ -1.72
LPP-220ENST00000617246 JPH4Q96JJ6 628 aa4.29□□□□□ -1.72
LPP-220ENST00000617246 KIF3BO15066 747 aa4.29□□□□□ -1.72
LPP-220ENST00000617246 NALCNQ8IZF0 1738 aa4.28□□□□□ -1.72
LPP-220ENST00000617246 MINK1Q8N4C8 1332 aaPredicted RBP4.28□□□□□ -1.72
LPP-220ENST00000617246 CRBNQ96SW2 442 aa4.28□□□□□ -1.72
LPP-220ENST00000617246 PHLPP1O60346 1717 aa4.28□□□□□ -1.72
LPP-220ENST00000617246 ANP32CO43423 234 aa4.28□□□□□ -1.72
LPP-220ENST00000617246 CAMSAP1Q5T5Y3 1602 aa4.28□□□□□ -1.72
LPP-220ENST00000617246 TRPM2O94759 1503 aa4.28□□□□□ -1.72
LPP-220ENST00000617246 LRRFIP1Q32MZ4 808 aaKnown RBP4.28□□□□□ -1.72
LPP-220ENST00000617246 AXDND1Q5T1B0 1012 aaPredicted RBP4.28□□□□□ -1.72
LPP-220ENST00000617246 L1TD1Q5T7N2 865 aaKnown RBP4.28□□□□□ -1.72
LPP-220ENST00000617246 TERF2IPQ9NYB0 399 aa4.28□□□□□ -1.72
LPP-220ENST00000617246 KIF15Q9NS87 1388 aa4.28□□□□□ -1.72
LPP-220ENST00000617246 TULP1O00294 542 aaPredicted RBP4.27□□□□□ -1.73
LPP-220ENST00000617246 NOP2P46087 812 aaKnown RBP4.27□□□□□ -1.73
LPP-220ENST00000617246 CLEC11AQ9Y240 323 aa4.27□□□□□ -1.73
LPP-220ENST00000617246 CEP170Q5SW79 1584 aa4.27□□□□□ -1.73
LPP-220ENST00000617246 KIF6Q6ZMV9 814 aa4.27□□□□□ -1.73
LPP-220ENST00000617246 MAST1Q9Y2H9 1570 aa4.27□□□□□ -1.73
LPP-220ENST00000617246 AMPHP49418 695 aa4.27□□□□□ -1.73
LPP-220ENST00000617246 DHX57Q6P158 1386 aaKnown RBP4.27□□□□□ -1.73
LPP-220ENST00000617246 RAPGEF4Q8WZA2 1011 aa4.27□□□□□ -1.73
LPP-220ENST00000617246 DNAI2Q9GZS0 605 aa4.27□□□□□ -1.73
LPP-220ENST00000617246 TMOD2Q9NZR1 351 aa4.27□□□□□ -1.73
LPP-220ENST00000617246 AQRO60306 1485 aaKnown RBP eCLIP4.27□□□□□ -1.73
LPP-220ENST00000617246 LMOD3Q0VAK6 560 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 SETD1BQ9UPS6 1966 aaKnown RBP4.26□□□□□ -1.73
LPP-220ENST00000617246 CROCC2H7BZ55 1655 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 GORABQ5T7V8 394 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 ZNF652Q9Y2D9 606 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 STK32BQ9NY57 414 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 CHIC2Q9UKJ5 165 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 VGFO15240 615 aaPredicted RBP4.26□□□□□ -1.73
LPP-220ENST00000617246 HRCP23327 699 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 KIF22Q14807 665 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 CHMP3Q9Y3E7 222 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 MS4A1P11836 297 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 MROH2AA6NES4 1674 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 NEUROD1Q13562 356 aa4.26□□□□□ -1.73
LPP-220ENST00000617246 ROCK2O75116 1388 aaKnown RBP4.26□□□□□ -1.73
LPP-220ENST00000617246 PCF11O94913 1555 aaKnown RBP4.26□□□□□ -1.73
LPP-220ENST00000617246 TTLL12Q14166 644 aaPredicted RBP4.25□□□□□ -1.73
LPP-220ENST00000617246 GPATCH3Q96I76 525 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 CAMSAP2Q08AD1 1489 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 R3HCC1Q9Y3T6 440 aaKnown RBP4.25□□□□□ -1.73
LPP-220ENST00000617246 CADPS2Q86UW7 1296 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 PPARGC1BQ86YN6 1023 aaKnown RBP4.25□□□□□ -1.73
LPP-220ENST00000617246 VPS53Q5VIR6 699 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 TMF1P82094 1093 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 AKAP12Q02952 1782 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 CCDC34Q96HJ3 373 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 ANP32BQ92688 251 aaKnown RBP4.25□□□□□ -1.73
LPP-220ENST00000617246 DNMT1P26358 1616 aaKnown RBP4.25□□□□□ -1.73
LPP-220ENST00000617246 KIF13AQ9H1H9 1805 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 AK7Q96M32 723 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 KNSTRNQ9Y448 316 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 SOX12O15370 315 aa4.25□□□□□ -1.73
LPP-220ENST00000617246 BCL11BQ9C0K0 894 aaPredicted RBP4.25□□□□□ -1.73
LPP-220ENST00000617246 PMFBP1Q8TBY8 1022 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 SPHKAPQ2M3C7 1700 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 PTPN23Q9H3S7 1636 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 KDM5DQ9BY66 1539 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 PIK3C2AO00443 1686 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 RNF17Q9BXT8 1623 aaKnown RBP4.24□□□□□ -1.73
LPP-220ENST00000617246 MYO1BO43795 1136 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 VPS37DQ86XT2 251 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 GPR162Q16538 588 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 ANKRD30BQ9BXX2 1392 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 NEO1Q92859 1461 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 RAD54L2Q9Y4B4 1467 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 ATP7AQ04656 1500 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 PKD2Q13563 968 aa4.24□□□□□ -1.73
LPP-220ENST00000617246 STK31Q9BXU1 1019 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 UGGT1Q9NYU2 1555 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 ABCC10Q5T3U5 1492 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 NEXNQ0ZGT2 675 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 TOM1L2Q6ZVM7 507 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 PRKAG2Q9UGJ0 569 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 ATAD2Q6PL18 1390 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 TEFQ10587 303 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 GNL2Q13823 731 aaKnown RBP4.23□□□□□ -1.73
LPP-220ENST00000617246 RIMS2Q9UQ26 1411 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 HSP90AB1P08238 724 aaKnown RBP4.23□□□□□ -1.73
LPP-220ENST00000617246 KIF1AQ12756 1690 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 ST5P78524 1137 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 NCLP19338 710 aaKnown RBP4.23□□□□□ -1.73
LPP-220ENST00000617246 FGD1P98174 961 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 CABP2Q9NPB3 220 aa4.23□□□□□ -1.73
LPP-220ENST00000617246 DUOX2Q9NRD8 1548 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 LRRIQ1Q96JM4 1722 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 PRDM11Q9NQV5 511 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 STRN4Q9NRL3 753 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 IQGAP1P46940 1657 aa4.22□□□□□ -1.73
LPP-220ENST00000617246 PPM1FP49593 454 aaPredicted RBP4.22□□□□□ -1.73
LPP-220ENST00000617246 CHAF1AQ13111 956 aaPredicted RBP4.22□□□□□ -1.73
LPP-220ENST00000617246 KDM2AQ9Y2K7 1162 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms