RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 RICTORQ6R327 1708 aa21.2■□□□□ 0.98
SEMA3B-212ENST00000616701 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
SEMA3B-212ENST00000616701 MROH2AA6NES4 1674 aa21.19■□□□□ 0.98
SEMA3B-212ENST00000616701 KIF1BO60333 1816 aa21.18■□□□□ 0.98
SEMA3B-212ENST00000616701 PANK3Q9H999 370 aa21.18■□□□□ 0.98
SEMA3B-212ENST00000616701 ABCC3O15438 1527 aa21.18■□□□□ 0.98
SEMA3B-212ENST00000616701 CC2D1BQ5T0F9 858 aaKnown RBP21.17■□□□□ 0.98
SEMA3B-212ENST00000616701 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
SEMA3B-212ENST00000616701 DIP2BQ9P265 1576 aa21.16■□□□□ 0.98
SEMA3B-212ENST00000616701 NOS1P29475 1434 aa21.16■□□□□ 0.98
SEMA3B-212ENST00000616701 GLI2P10070 1586 aa21.14■□□□□ 0.98
SEMA3B-212ENST00000616701 SCAF11Q99590 1463 aaKnown RBP21.13■□□□□ 0.97
SEMA3B-212ENST00000616701 PER1O15534 1290 aaPredicted RBP21.13■□□□□ 0.97
SEMA3B-212ENST00000616701 STAC3Q96MF2 364 aa21.12■□□□□ 0.97
SEMA3B-212ENST00000616701 EIF5BO60841 1220 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-212ENST00000616701 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
SEMA3B-212ENST00000616701 NEFLP07196 543 aa21.11■□□□□ 0.97
SEMA3B-212ENST00000616701 IRX6P78412 446 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-212ENST00000616701 CAMSAP1Q5T5Y3 1602 aa21.1■□□□□ 0.97
SEMA3B-212ENST00000616701 MYBBP1AQ9BQG0 1328 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-212ENST00000616701 SIGLEC1Q9BZZ2 1709 aa21.1■□□□□ 0.97
SEMA3B-212ENST00000616701 SALL2Q9Y467 1007 aaPredicted RBP21.09■□□□□ 0.97
SEMA3B-212ENST00000616701 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
SEMA3B-212ENST00000616701 RALBP1Q15311 655 aa21.09■□□□□ 0.97
SEMA3B-212ENST00000616701 TMEM132EQ6IEE7 984 aa21.09■□□□□ 0.97
SEMA3B-212ENST00000616701 MLECQ14165 292 aa21.09■□□□□ 0.97
SEMA3B-212ENST00000616701 PNISRQ8TF01 805 aaKnown RBP21.09■□□□□ 0.97
SEMA3B-212ENST00000616701 ADGRB3O60242 1522 aa21.08■□□□□ 0.97
SEMA3B-212ENST00000616701 MYOM2P54296 1465 aa21.08■□□□□ 0.96
SEMA3B-212ENST00000616701 TRAK1Q9UPV9 953 aa21.07■□□□□ 0.96
SEMA3B-212ENST00000616701 IDI1Q13907 227 aa21.06■□□□□ 0.96
SEMA3B-212ENST00000616701 FBXO31Q5XUX0 539 aaPredicted RBP21.06■□□□□ 0.96
SEMA3B-212ENST00000616701 ZBED9Q6R2W3 1325 aa21.06■□□□□ 0.96
SEMA3B-212ENST00000616701 IFT172Q9UG01 1749 aa21.05■□□□□ 0.96
SEMA3B-212ENST00000616701 EIF3AQ14152 1382 aaKnown RBP21.04■□□□□ 0.96
SEMA3B-212ENST00000616701 NEURL4Q96JN8 1562 aa21.04■□□□□ 0.96
SEMA3B-212ENST00000616701 SYNMO15061 1565 aa21.03■□□□□ 0.96
SEMA3B-212ENST00000616701 PARD3Q8TEW0 1356 aa21.03■□□□□ 0.96
SEMA3B-212ENST00000616701 BRD4O60885 1362 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-212ENST00000616701 PLEKHG5O94827 1062 aa21■□□□□ 0.95
SEMA3B-212ENST00000616701 NLRP13Q86W25 1043 aa21■□□□□ 0.95
SEMA3B-212ENST00000616701 KIAA1210Q9ULL0 1709 aa21■□□□□ 0.95
SEMA3B-212ENST00000616701 KNSTRNQ9Y448 316 aa21■□□□□ 0.95
SEMA3B-212ENST00000616701 NRXN1Q9ULB1 1477 aa20.99■□□□□ 0.95
SEMA3B-212ENST00000616701 CDCA8Q53HL2 280 aa20.99■□□□□ 0.95
SEMA3B-212ENST00000616701 C14orf93Q9H972 538 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-212ENST00000616701 PPLO60437 1756 aa20.99■□□□□ 0.95
SEMA3B-212ENST00000616701 PIK3C2GO75747 1445 aa20.98■□□□□ 0.95
SEMA3B-212ENST00000616701 ZMYM4Q5VZL5 1548 aa20.97■□□□□ 0.95
SEMA3B-212ENST00000616701 CENPJQ9HC77 1338 aaPredicted RBP20.95■□□□□ 0.94
SEMA3B-212ENST00000616701 UBE2Q2Q8WVN8 375 aa20.95■□□□□ 0.94
SEMA3B-212ENST00000616701 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
SEMA3B-212ENST00000616701 ERVK-7P63135 1459 aa20.95■□□□□ 0.94
SEMA3B-212ENST00000616701 ARHGAP31Q2M1Z3 1444 aa20.94■□□□□ 0.94
SEMA3B-212ENST00000616701 SAFB2Q14151 953 aaKnown RBP eCLIP20.94■□□□□ 0.94
SEMA3B-212ENST00000616701 PIK3C2BO00750 1634 aa20.93■□□□□ 0.94
SEMA3B-212ENST00000616701 VGFO15240 615 aaPredicted RBP20.93■□□□□ 0.94
SEMA3B-212ENST00000616701 SLC52A1Q9NWF4 448 aa20.93■□□□□ 0.94
SEMA3B-212ENST00000616701 STK26Q9P289 416 aa20.93■□□□□ 0.94
SEMA3B-212ENST00000616701 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
SEMA3B-212ENST00000616701 ZC3H13Q5T200 1668 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-212ENST00000616701 LRPPRCP42704 1394 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-212ENST00000616701 AMER1Q5JTC6 1135 aaPredicted RBP20.92■□□□□ 0.94
SEMA3B-212ENST00000616701 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
SEMA3B-212ENST00000616701 MYO5BQ9ULV0 1848 aa20.91■□□□□ 0.94
SEMA3B-212ENST00000616701 NEXMIFQ5QGS0 1516 aa20.91■□□□□ 0.94
SEMA3B-212ENST00000616701 PREX1Q8TCU6 1659 aa20.9■□□□□ 0.94
SEMA3B-212ENST00000616701 KDM5AP29375 1690 aaKnown RBP20.89■□□□□ 0.94
SEMA3B-212ENST00000616701 MYOM1P52179 1685 aa20.89■□□□□ 0.94
SEMA3B-212ENST00000616701 ADGRB1O14514 1584 aa20.89■□□□□ 0.93
SEMA3B-212ENST00000616701 PPP2R1AP30153 589 aa20.87■□□□□ 0.93
SEMA3B-212ENST00000616701 CARD14Q9BXL6 1004 aa20.87■□□□□ 0.93
SEMA3B-212ENST00000616701 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.87■□□□□ 0.93
SEMA3B-212ENST00000616701 SETBP1Q9Y6X0 1596 aa20.86■□□□□ 0.93
SEMA3B-212ENST00000616701 CLTCQ00610 1675 aaKnown RBP20.86■□□□□ 0.93
SEMA3B-212ENST00000616701 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
SEMA3B-212ENST00000616701 NUDCQ9Y266 331 aa20.84■□□□□ 0.93
SEMA3B-212ENST00000616701 ASXL1Q8IXJ9 1541 aa20.83■□□□□ 0.93
SEMA3B-212ENST00000616701 TMEM131LA2VDJ0 1609 aa20.82■□□□□ 0.92
SEMA3B-212ENST00000616701 QRICH2Q9H0J4 1663 aa20.82■□□□□ 0.92
SEMA3B-212ENST00000616701 ESF1Q9H501 851 aaKnown RBP20.82■□□□□ 0.92
SEMA3B-212ENST00000616701 MYO3AQ8NEV4 1616 aa20.81■□□□□ 0.92
SEMA3B-212ENST00000616701 SMG6Q86US8 1419 aaKnown RBP20.81■□□□□ 0.92
SEMA3B-212ENST00000616701 ADAMTS8Q9UP79 889 aa20.8■□□□□ 0.92
SEMA3B-212ENST00000616701 CABP2Q9NPB3 220 aa20.8■□□□□ 0.92
SEMA3B-212ENST00000616701 AGLP35573 1532 aa20.8■□□□□ 0.92
SEMA3B-212ENST00000616701 TNNT2P45379 298 aaPredicted RBP20.79■□□□□ 0.92
SEMA3B-212ENST00000616701 SBNO2Q9Y2G9 1366 aa20.79■□□□□ 0.92
SEMA3B-212ENST00000616701 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
SEMA3B-212ENST00000616701 ARHGEF40Q8TER5 1519 aa20.77■□□□□ 0.92
SEMA3B-212ENST00000616701 REREQ9P2R6 1566 aa20.77■□□□□ 0.92
SEMA3B-212ENST00000616701 MINK1Q8N4C8 1332 aaPredicted RBP20.76■□□□□ 0.91
SEMA3B-212ENST00000616701 CDCA7LQ96GN5 454 aa20.76■□□□□ 0.91
SEMA3B-212ENST00000616701 WDR43Q15061 677 aaKnown RBP eCLIP20.76■□□□□ 0.918e-7■■□□□ 12.2
SEMA3B-212ENST00000616701 NSD3Q9BZ95 1437 aa20.75■□□□□ 0.91
SEMA3B-212ENST00000616701 PRAM1Q96QH2 718 aa20.75■□□□□ 0.91
SEMA3B-212ENST00000616701 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
SEMA3B-212ENST00000616701 ARHGEF28Q8N1W1 1705 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-212ENST00000616701 EVC2Q86UK5 1308 aa20.74■□□□□ 0.91
SEMA3B-212ENST00000616701 POGKQ9P215 609 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms