RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 MINK1Q8N4C8 1332 aaPredicted RBP17.96■□□□□ 0.47
SSBP2-220ENST00000615665 DHX29Q7Z478 1369 aaKnown RBP17.95■□□□□ 0.46
SSBP2-220ENST00000615665 FANCAO15360 1455 aa17.95■□□□□ 0.46
SSBP2-220ENST00000615665 CLUAP1Q96AJ1 413 aa17.95■□□□□ 0.46
SSBP2-220ENST00000615665 ABCC10Q5T3U5 1492 aa17.94■□□□□ 0.46
SSBP2-220ENST00000615665 CHMP4BQ9H444 224 aaKnown RBP17.94■□□□□ 0.46
SSBP2-220ENST00000615665 ABCA8O94911 1581 aa17.94■□□□□ 0.46
SSBP2-220ENST00000615665 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
SSBP2-220ENST00000615665 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
SSBP2-220ENST00000615665 SMC4Q9NTJ3 1288 aa17.93■□□□□ 0.46
SSBP2-220ENST00000615665 SPATA31E1Q6ZUB1 1445 aa17.93■□□□□ 0.46
SSBP2-220ENST00000615665 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
SSBP2-220ENST00000615665 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
SSBP2-220ENST00000615665 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
SSBP2-220ENST00000615665 ABCC2Q92887 1545 aa17.93■□□□□ 0.46
SSBP2-220ENST00000615665 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
SSBP2-220ENST00000615665 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
SSBP2-220ENST00000615665 LRRIQ1Q96JM4 1722 aa17.91■□□□□ 0.46
SSBP2-220ENST00000615665 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.91■□□□□ 0.46
SSBP2-220ENST00000615665 BCL2L13Q9BXK5 485 aa17.91■□□□□ 0.46
SSBP2-220ENST00000615665 ITPRIPQ8IWB1 547 aa17.9■□□□□ 0.46
SSBP2-220ENST00000615665 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
SSBP2-220ENST00000615665 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
SSBP2-220ENST00000615665 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
SSBP2-220ENST00000615665 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
SSBP2-220ENST00000615665 COG6Q9Y2V7 657 aa17.9■□□□□ 0.46
SSBP2-220ENST00000615665 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.45
SSBP2-220ENST00000615665 MTHFSP49914 203 aa17.88■□□□□ 0.45
SSBP2-220ENST00000615665 ARHGEF5Q12774 1597 aa17.88■□□□□ 0.45
SSBP2-220ENST00000615665 FAM69CQ0P6D2 419 aa17.88■□□□□ 0.45
SSBP2-220ENST00000615665 ADGRF5Q8IZF2 1346 aa17.88■□□□□ 0.45
SSBP2-220ENST00000615665 SOX12O15370 315 aa17.88■□□□□ 0.45
SSBP2-220ENST00000615665 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
SSBP2-220ENST00000615665 CD109Q6YHK3 1445 aa17.88■□□□□ 0.45
SSBP2-220ENST00000615665 RPGRIP1LQ68CZ1 1315 aa17.87■□□□□ 0.45
SSBP2-220ENST00000615665 TESK2Q96S53 571 aa17.87■□□□□ 0.45
SSBP2-220ENST00000615665 MBD5Q9P267 1494 aa17.87■□□□□ 0.45
SSBP2-220ENST00000615665 PARD3Q8TEW0 1356 aa17.86■□□□□ 0.45
SSBP2-220ENST00000615665 KDM5BQ9UGL1 1544 aa17.85■□□□□ 0.45
SSBP2-220ENST00000615665 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
SSBP2-220ENST00000615665 EIF2AK4Q9P2K8 1649 aaKnown RBP17.85■□□□□ 0.45
SSBP2-220ENST00000615665 TCP11L2Q8N4U5 519 aa17.84■□□□□ 0.45
SSBP2-220ENST00000615665 GGNBP2Q9H3C7 697 aa17.84■□□□□ 0.45
SSBP2-220ENST00000615665 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
SSBP2-220ENST00000615665 A2MP01023 1474 aa17.84■□□□□ 0.45
SSBP2-220ENST00000615665 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.44
SSBP2-220ENST00000615665 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.44
SSBP2-220ENST00000615665 SLC52A1Q9NWF4 448 aa17.82■□□□□ 0.44
SSBP2-220ENST00000615665 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
SSBP2-220ENST00000615665 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
SSBP2-220ENST00000615665 HAP1P54257 671 aaPredicted RBP17.81■□□□□ 0.44
SSBP2-220ENST00000615665 NSD3Q9BZ95 1437 aa17.8■□□□□ 0.44
SSBP2-220ENST00000615665 RTEL1-TNFRSF6BF6WH68 1400 aa17.8■□□□□ 0.44
SSBP2-220ENST00000615665 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
SSBP2-220ENST00000615665 ASXL2Q76L83 1435 aa17.79■□□□□ 0.44
SSBP2-220ENST00000615665 PER1O15534 1290 aaPredicted RBP17.79■□□□□ 0.44
SSBP2-220ENST00000615665 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
SSBP2-220ENST00000615665 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSBP2-220ENST00000615665 COL17A1Q9UMD9 1497 aaPredicted RBP17.79■□□□□ 0.44
SSBP2-220ENST00000615665 SLFN5Q08AF3 891 aa17.78■□□□□ 0.44
SSBP2-220ENST00000615665 NOS1P29475 1434 aa17.78■□□□□ 0.44
SSBP2-220ENST00000615665 ADCY10Q96PN6 1610 aa17.78■□□□□ 0.44
SSBP2-220ENST00000615665 PRAM1Q96QH2 718 aa17.78■□□□□ 0.44
SSBP2-220ENST00000615665 BCAR3O75815 825 aa17.78■□□□□ 0.44
SSBP2-220ENST00000615665 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
SSBP2-220ENST00000615665 MAST1Q9Y2H9 1570 aa17.78■□□□□ 0.44
SSBP2-220ENST00000615665 RIPK4P57078 832 aa17.77■□□□□ 0.44
SSBP2-220ENST00000615665 LMOD3Q0VAK6 560 aa17.77■□□□□ 0.44
SSBP2-220ENST00000615665 AMER1Q5JTC6 1135 aaPredicted RBP17.76■□□□□ 0.43
SSBP2-220ENST00000615665 COG3Q96JB2 828 aa17.76■□□□□ 0.43
SSBP2-220ENST00000615665 KDM5CP41229 1560 aa17.76■□□□□ 0.43
SSBP2-220ENST00000615665 GPRASP1Q5JY77 1395 aa17.75■□□□□ 0.43
SSBP2-220ENST00000615665 CASC1Q6TDU7 716 aa17.75■□□□□ 0.43
SSBP2-220ENST00000615665 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
SSBP2-220ENST00000615665 RTF1Q92541 710 aaKnown RBP17.75■□□□□ 0.43
SSBP2-220ENST00000615665 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
SSBP2-220ENST00000615665 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
SSBP2-220ENST00000615665 GLIPR1L2Q4G1C9 344 aa17.75■□□□□ 0.43
SSBP2-220ENST00000615665 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
SSBP2-220ENST00000615665 MSH5O43196 834 aa17.74■□□□□ 0.43
SSBP2-220ENST00000615665 PDE3AQ14432 1141 aa17.74■□□□□ 0.43
SSBP2-220ENST00000615665 EID1Q9Y6B2 187 aa17.74■□□□□ 0.43
SSBP2-220ENST00000615665 BACH2Q9BYV9 841 aa17.74■□□□□ 0.43
SSBP2-220ENST00000615665 HSCBQ8IWL3 235 aa17.74■□□□□ 0.43
SSBP2-220ENST00000615665 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.74■□□□□ 0.43
SSBP2-220ENST00000615665 PREX2Q70Z35 1606 aa17.73■□□□□ 0.43
SSBP2-220ENST00000615665 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
SSBP2-220ENST00000615665 MYO5CQ9NQX4 1742 aa17.73■□□□□ 0.43
SSBP2-220ENST00000615665 ANP32BQ92688 251 aaKnown RBP17.73■□□□□ 0.43
SSBP2-220ENST00000615665 C14orf93Q9H972 538 aaKnown RBP17.72■□□□□ 0.43
SSBP2-220ENST00000615665 AAMPQ13685 434 aa17.72■□□□□ 0.43
SSBP2-220ENST00000615665 ASXL1Q8IXJ9 1541 aa17.72■□□□□ 0.43
SSBP2-220ENST00000615665 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
SSBP2-220ENST00000615665 SLKQ9H2G2 1235 aaPredicted RBP17.72■□□□□ 0.43
SSBP2-220ENST00000615665 C20orf194Q5TEA3 1177 aa17.72■□□□□ 0.43
SSBP2-220ENST00000615665 ZNF518AQ6AHZ1 1483 aa17.72■□□□□ 0.43
SSBP2-220ENST00000615665 TTC37Q6PGP7 1564 aa17.71■□□□□ 0.43
SSBP2-220ENST00000615665 WWC1Q8IX03 1113 aa17.71■□□□□ 0.43
SSBP2-220ENST00000615665 DDX19BQ9UMR2 479 aa17.71■□□□□ 0.43
SSBP2-220ENST00000615665 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms