RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.09□□□□□ -0.31
RDM1-218ENST00000615288 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
RDM1-218ENST00000615288 ZFYVE16Q7Z3T8 1539 aa13.08□□□□□ -0.31
RDM1-218ENST00000615288 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
RDM1-218ENST00000615288 KDM2BQ8NHM5 1336 aa13.08□□□□□ -0.32
RDM1-218ENST00000615288 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.32
RDM1-218ENST00000615288 CHD1O14646 1710 aa13.07□□□□□ -0.32
RDM1-218ENST00000615288 ZNF521Q96K83 1311 aa13.07□□□□□ -0.32
RDM1-218ENST00000615288 INO80Q9ULG1 1556 aaPredicted RBP13.07□□□□□ -0.32
RDM1-218ENST00000615288 SBNO2Q9Y2G9 1366 aa13.07□□□□□ -0.32
RDM1-218ENST00000615288 KDM2AQ9Y2K7 1162 aa13.05□□□□□ -0.32
RDM1-218ENST00000615288 USP32Q8NFA0 1604 aa13.05□□□□□ -0.32
RDM1-218ENST00000615288 CLTCL1P53675 1640 aa13.04□□□□□ -0.32
RDM1-218ENST00000615288 ZCCHC11Q5TAX3 1644 aaKnown RBP13.04□□□□□ -0.32
RDM1-218ENST00000615288 AAMPQ13685 434 aa13.04□□□□□ -0.32
RDM1-218ENST00000615288 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
RDM1-218ENST00000615288 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
RDM1-218ENST00000615288 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.32
RDM1-218ENST00000615288 PANK3Q9H999 370 aa13.02□□□□□ -0.33
RDM1-218ENST00000615288 NKTRP30414 1462 aaKnown RBP13.02□□□□□ -0.33
RDM1-218ENST00000615288 NBR1Q14596 966 aa13.01□□□□□ -0.33
RDM1-218ENST00000615288 NRXN1Q9ULB1 1477 aa13.01□□□□□ -0.33
RDM1-218ENST00000615288 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
RDM1-218ENST00000615288 ABCA9Q8IUA7 1624 aa13.01□□□□□ -0.33
RDM1-218ENST00000615288 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
RDM1-218ENST00000615288 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
RDM1-218ENST00000615288 TRMT2AQ8IZ69 625 aaKnown RBP13□□□□□ -0.33
RDM1-218ENST00000615288 WDR43Q15061 677 aaKnown RBP eCLIP12.99□□□□□ -0.33
RDM1-218ENST00000615288 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
RDM1-218ENST00000615288 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
RDM1-218ENST00000615288 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
RDM1-218ENST00000615288 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
RDM1-218ENST00000615288 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
RDM1-218ENST00000615288 DUSP27Q5VZP5 1158 aa12.98□□□□□ -0.33
RDM1-218ENST00000615288 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
RDM1-218ENST00000615288 ABCA6Q8N139 1617 aa12.98□□□□□ -0.33
RDM1-218ENST00000615288 ATP7AQ04656 1500 aa12.98□□□□□ -0.33
RDM1-218ENST00000615288 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
RDM1-218ENST00000615288 KANK1Q14678 1352 aa12.97□□□□□ -0.33
RDM1-218ENST00000615288 PLEKHH1Q9ULM0 1364 aa12.97□□□□□ -0.33
RDM1-218ENST00000615288 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
RDM1-218ENST00000615288 FANCAO15360 1455 aa12.97□□□□□ -0.33
RDM1-218ENST00000615288 ZC3H13Q5T200 1668 aaKnown RBP12.96□□□□□ -0.33
RDM1-218ENST00000615288 MROH1Q8NDA8 1641 aa12.96□□□□□ -0.33
RDM1-218ENST00000615288 FBLN2P98095 1184 aa12.96□□□□□ -0.33
RDM1-218ENST00000615288 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
RDM1-218ENST00000615288 NEFMP07197 916 aa12.95□□□□□ -0.34
RDM1-218ENST00000615288 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
RDM1-218ENST00000615288 ADGRL1O94910 1474 aa12.95□□□□□ -0.34
RDM1-218ENST00000615288 KIF1BO60333 1816 aa12.95□□□□□ -0.34
RDM1-218ENST00000615288 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
RDM1-218ENST00000615288 CGNL1Q0VF96 1302 aa12.94□□□□□ -0.34
RDM1-218ENST00000615288 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
RDM1-218ENST00000615288 ERVK-7P63135 1459 aa12.94□□□□□ -0.34
RDM1-218ENST00000615288 E9PSI1 815 aa12.94□□□□□ -0.34
RDM1-218ENST00000615288 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
RDM1-218ENST00000615288 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
RDM1-218ENST00000615288 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
RDM1-218ENST00000615288 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
RDM1-218ENST00000615288 TRAPPC8Q9Y2L5 1435 aa12.92□□□□□ -0.34
RDM1-218ENST00000615288 IQSEC2Q5JU85 1478 aa12.91□□□□□ -0.34
RDM1-218ENST00000615288 CFAP74Q9C0B2 1584 aa12.91□□□□□ -0.34
RDM1-218ENST00000615288 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
RDM1-218ENST00000615288 SHPRHQ149N8 1683 aa12.91□□□□□ -0.34
RDM1-218ENST00000615288 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
RDM1-218ENST00000615288 SPAG9O60271 1321 aaKnown RBP12.89□□□□□ -0.35
RDM1-218ENST00000615288 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
RDM1-218ENST00000615288 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
RDM1-218ENST00000615288 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
RDM1-218ENST00000615288 PUS7Q96PZ0 661 aaKnown RBP12.89□□□□□ -0.35
RDM1-218ENST00000615288 NSD2O96028 1365 aa12.89□□□□□ -0.35
RDM1-218ENST00000615288 GSE1Q14687 1217 aa12.87□□□□□ -0.35
RDM1-218ENST00000615288 PPRC1Q5VV67 1664 aaKnown RBP12.86□□□□□ -0.35
RDM1-218ENST00000615288 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
RDM1-218ENST00000615288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
RDM1-218ENST00000615288 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
RDM1-218ENST00000615288 PPLO60437 1756 aa12.85□□□□□ -0.35
RDM1-218ENST00000615288 PLIN1O60240 522 aa12.85□□□□□ -0.35
RDM1-218ENST00000615288 MROH2AA6NES4 1674 aa12.85□□□□□ -0.35
RDM1-218ENST00000615288 QRICH2Q9H0J4 1663 aa12.85□□□□□ -0.35
RDM1-218ENST00000615288 NFKBIBQ15653 356 aa12.84□□□□□ -0.35
RDM1-218ENST00000615288 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
RDM1-218ENST00000615288 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
RDM1-218ENST00000615288 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
RDM1-218ENST00000615288 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
RDM1-218ENST00000615288 PHF23Q9BUL5 403 aaPredicted RBP12.83□□□□□ -0.36
RDM1-218ENST00000615288 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
RDM1-218ENST00000615288 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
RDM1-218ENST00000615288 NLRP1Q9C000 1473 aa12.83□□□□□ -0.36
RDM1-218ENST00000615288 HECW2Q9P2P5 1572 aa12.82□□□□□ -0.36
RDM1-218ENST00000615288 BECN1Q14457 450 aa12.82□□□□□ -0.36
RDM1-218ENST00000615288 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
RDM1-218ENST00000615288 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
RDM1-218ENST00000615288 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
RDM1-218ENST00000615288 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
RDM1-218ENST00000615288 KIDINS220Q9ULH0 1771 aa12.8□□□□□ -0.36
RDM1-218ENST00000615288 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
RDM1-218ENST00000615288 RPGRIP1LQ68CZ1 1315 aa12.8□□□□□ -0.36
RDM1-218ENST00000615288 PIK3C2BO00750 1634 aa12.8□□□□□ -0.36
RDM1-218ENST00000615288 MED14O60244 1454 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms