RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
SRSF3-204ENST00000613941 RGS12O14924 1447 aa17.01■□□□□ 0.31
SRSF3-204ENST00000613941 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
SRSF3-204ENST00000613941 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
SRSF3-204ENST00000613941 NUTM2BA6NNL0 878 aaPredicted RBP16.98■□□□□ 0.31
SRSF3-204ENST00000613941 NUTM2EB1AL46 878 aaPredicted RBP16.98■□□□□ 0.31
SRSF3-204ENST00000613941 NUTM2AQ8IVF1 878 aaPredicted RBP16.98■□□□□ 0.31
SRSF3-204ENST00000613941 SETBP1Q9Y6X0 1596 aa16.97■□□□□ 0.31
SRSF3-204ENST00000613941 AFF2P51816 1311 aa16.96■□□□□ 0.31
SRSF3-204ENST00000613941 BCANQ96GW7 911 aa16.96■□□□□ 0.31
SRSF3-204ENST00000613941 IDI1Q13907 227 aa16.94■□□□□ 0.3
SRSF3-204ENST00000613941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.32e-9■■■□□ 15.8
SRSF3-204ENST00000613941 NHSL1Q5SYE7 1610 aa16.94■□□□□ 0.3
SRSF3-204ENST00000613941 NUTM2DQ5VT03 806 aaPredicted RBP16.92■□□□□ 0.3
SRSF3-204ENST00000613941 EP400Q96L91 3159 aa16.92■□□□□ 0.3
SRSF3-204ENST00000613941 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
SRSF3-204ENST00000613941 ERBINQ96RT1 1412 aa16.9■□□□□ 0.3
SRSF3-204ENST00000613941 KIF15Q9NS87 1388 aa16.89■□□□□ 0.3
SRSF3-204ENST00000613941 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
SRSF3-204ENST00000613941 LMTK2Q8IWU2 1503 aa16.87■□□□□ 0.29
SRSF3-204ENST00000613941 ASXL1Q8IXJ9 1541 aa16.87■□□□□ 0.29
SRSF3-204ENST00000613941 PLEKHG1Q9ULL1 1385 aa16.87■□□□□ 0.29
SRSF3-204ENST00000613941 NOS1P29475 1434 aa16.87■□□□□ 0.29
SRSF3-204ENST00000613941 TMEM131LA2VDJ0 1609 aa16.86■□□□□ 0.29
SRSF3-204ENST00000613941 C8orf37Q96NL8 207 aa16.86■□□□□ 0.29
SRSF3-204ENST00000613941 KANK1Q14678 1352 aa16.86■□□□□ 0.29
SRSF3-204ENST00000613941 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
SRSF3-204ENST00000613941 BRINP3Q76B58 766 aa16.85■□□□□ 0.29
SRSF3-204ENST00000613941 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
SRSF3-204ENST00000613941 NCOA3Q9Y6Q9 1424 aa16.85■□□□□ 0.29
SRSF3-204ENST00000613941 ATF3P18847 181 aa16.84■□□□□ 0.29
SRSF3-204ENST00000613941 CADPS2Q86UW7 1296 aa16.84■□□□□ 0.29
SRSF3-204ENST00000613941 RRP7BPQ9NSQ0 103 aa16.84■□□□□ 0.29
SRSF3-204ENST00000613941 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
SRSF3-204ENST00000613941 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
SRSF3-204ENST00000613941 RIMS2Q9UQ26 1411 aa16.84■□□□□ 0.29
SRSF3-204ENST00000613941 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.28
SRSF3-204ENST00000613941 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
SRSF3-204ENST00000613941 PPP1R15AO75807 674 aaPredicted RBP16.82■□□□□ 0.28
SRSF3-204ENST00000613941 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
SRSF3-204ENST00000613941 ADAMTS13Q76LX8 1427 aa16.8■□□□□ 0.28
SRSF3-204ENST00000613941 PTPN23Q9H3S7 1636 aa16.8■□□□□ 0.28
SRSF3-204ENST00000613941 ABCC5O15440 1437 aa16.79■□□□□ 0.28
SRSF3-204ENST00000613941 PNPLA6Q8IY17 1366 aa16.78■□□□□ 0.28
SRSF3-204ENST00000613941 DDX17Q92841 729 aaKnown RBP16.78■□□□□ 0.28
SRSF3-204ENST00000613941 NALCNQ8IZF0 1738 aa16.78■□□□□ 0.28
SRSF3-204ENST00000613941 XRN1Q8IZH2 1706 aaKnown RBP16.78■□□□□ 0.28
SRSF3-204ENST00000613941 TRPM2O94759 1503 aa16.77■□□□□ 0.28
SRSF3-204ENST00000613941 MST1RQ04912 1400 aa16.77■□□□□ 0.27
SRSF3-204ENST00000613941 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
SRSF3-204ENST00000613941 ADAMTS2O95450 1211 aa16.76■□□□□ 0.27
SRSF3-204ENST00000613941 TBX22Q9Y458 520 aa16.76■□□□□ 0.27
SRSF3-204ENST00000613941 PTPRUQ92729 1446 aa16.76■□□□□ 0.27
SRSF3-204ENST00000613941 UNC13BO14795 1591 aa16.76■□□□□ 0.27
SRSF3-204ENST00000613941 LRP5O75197 1615 aa16.75■□□□□ 0.27
SRSF3-204ENST00000613941 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
SRSF3-204ENST00000613941 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
SRSF3-204ENST00000613941 DCCP43146 1447 aa16.74■□□□□ 0.27
SRSF3-204ENST00000613941 DAPK1P53355 1430 aa16.74■□□□□ 0.27
SRSF3-204ENST00000613941 NGLY1Q96IV0 654 aa16.74■□□□□ 0.27
SRSF3-204ENST00000613941 NRXN3Q9Y4C0 1643 aa16.74■□□□□ 0.27
SRSF3-204ENST00000613941 FOXD1Q16676 465 aa16.73■□□□□ 0.27
SRSF3-204ENST00000613941 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
SRSF3-204ENST00000613941 E9PCH4 1651 aa16.72■□□□□ 0.27
SRSF3-204ENST00000613941 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.27
SRSF3-204ENST00000613941 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
SRSF3-204ENST00000613941 PIK3R4Q99570 1358 aa16.71■□□□□ 0.27
SRSF3-204ENST00000613941 RPRD2Q5VT52 1461 aaKnown RBP16.71■□□□□ 0.27
SRSF3-204ENST00000613941 USP21Q9UK80 565 aa16.7■□□□□ 0.26
SRSF3-204ENST00000613941 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
SRSF3-204ENST00000613941 AMOTL2Q9Y2J4 779 aa16.7■□□□□ 0.26
SRSF3-204ENST00000613941 LAMC1P11047 1609 aa16.69■□□□□ 0.26
SRSF3-204ENST00000613941 ATRNO75882 1429 aa16.69■□□□□ 0.26
SRSF3-204ENST00000613941 HDGFP51858 240 aaKnown RBP16.68■□□□□ 0.26
SRSF3-204ENST00000613941 TRPC5Q9UL62 973 aaPredicted RBP16.67■□□□□ 0.26
SRSF3-204ENST00000613941 COL22A1Q8NFW1 1626 aaPredicted RBP16.67■□□□□ 0.26
SRSF3-204ENST00000613941 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
SRSF3-204ENST00000613941 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
SRSF3-204ENST00000613941 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.64■□□□□ 0.25
SRSF3-204ENST00000613941 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
SRSF3-204ENST00000613941 ADGRL3Q9HAR2 1447 aa16.62■□□□□ 0.25
SRSF3-204ENST00000613941 PTCH1Q13635 1447 aa16.62■□□□□ 0.25
SRSF3-204ENST00000613941 IQGAP3Q86VI3 1631 aa16.61■□□□□ 0.25
SRSF3-204ENST00000613941 DEFB132Q7Z7B7 95 aa16.61■□□□□ 0.25
SRSF3-204ENST00000613941 CCDC125Q86Z20 511 aa16.61■□□□□ 0.25
SRSF3-204ENST00000613941 GLI3P10071 1580 aa16.6■□□□□ 0.25
SRSF3-204ENST00000613941 FNBP4Q8N3X1 1017 aaPredicted RBP16.6■□□□□ 0.25
SRSF3-204ENST00000613941 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
SRSF3-204ENST00000613941 SPHKAPQ2M3C7 1700 aa16.59■□□□□ 0.25
SRSF3-204ENST00000613941 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
SRSF3-204ENST00000613941 BCL9LQ86UU0 1499 aa16.59■□□□□ 0.25
SRSF3-204ENST00000613941 ADGRL2O95490 1459 aa16.58■□□□□ 0.24
SRSF3-204ENST00000613941 METP08581 1390 aa16.57■□□□□ 0.24
SRSF3-204ENST00000613941 MYOM2P54296 1465 aa16.55■□□□□ 0.24
SRSF3-204ENST00000613941 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
SRSF3-204ENST00000613941 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
SRSF3-204ENST00000613941 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
SRSF3-204ENST00000613941 ORAI2Q96SN7 254 aa16.54■□□□□ 0.24
SRSF3-204ENST00000613941 GJD4Q96KN9 370 aaPredicted RBP16.53■□□□□ 0.24
SRSF3-204ENST00000613941 RALGAPBQ86X10 1494 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms