RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 ZPR1O75312 459 aa11.16□□□□□ -0.62
TARDBP-214ENST00000613177 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
TARDBP-214ENST00000613177 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
TARDBP-214ENST00000613177 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-214ENST00000613177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
TARDBP-214ENST00000613177 HIC1Q14526 733 aa11.14□□□□□ -0.63
TARDBP-214ENST00000613177 BLOC1S3Q6QNY0 202 aa11.14□□□□□ -0.63
TARDBP-214ENST00000613177 PXYLP1Q8TE99 480 aa11.14□□□□□ -0.63
TARDBP-214ENST00000613177 GPR37O15354 613 aa11.13□□□□□ -0.63
TARDBP-214ENST00000613177 ACTN4O43707 911 aaKnown RBP11.12□□□□□ -0.63
TARDBP-214ENST00000613177 SLC10A3P09131 477 aa11.12□□□□□ -0.63
TARDBP-214ENST00000613177 LAPTM4AQ15012 233 aa11.12□□□□□ -0.63
TARDBP-214ENST00000613177 Q6ZNB5 142 aa11.12□□□□□ -0.63
TARDBP-214ENST00000613177 OATP04181 439 aa11.11□□□□□ -0.63
TARDBP-214ENST00000613177 CFHP08603 1231 aa11.1□□□□□ -0.63
TARDBP-214ENST00000613177 METTL3Q86U44 580 aaKnown RBP11.1□□□□□ -0.63
TARDBP-214ENST00000613177 TMUB1Q9BVT8 246 aa11.1□□□□□ -0.63
TARDBP-214ENST00000613177 LCE2BO14633 110 aa11.09□□□□□ -0.63
TARDBP-214ENST00000613177 GFRA3O60609 400 aa11.09□□□□□ -0.63
TARDBP-214ENST00000613177 FECHP22830 423 aa11.09□□□□□ -0.63
TARDBP-214ENST00000613177 GGCXP38435 758 aa11.09□□□□□ -0.63
TARDBP-214ENST00000613177 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
TARDBP-214ENST00000613177 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
TARDBP-214ENST00000613177 GNPATO15228 680 aa11.07□□□□□ -0.64
TARDBP-214ENST00000613177 TLL1O43897 1013 aa11.07□□□□□ -0.64
TARDBP-214ENST00000613177 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
TARDBP-214ENST00000613177 RNF223E7ERA6 249 aa11.05□□□□□ -0.64
TARDBP-214ENST00000613177 NRG2O14511 850 aaPredicted RBP11.04□□□□□ -0.64
TARDBP-214ENST00000613177 EMID1Q96A84 441 aaPredicted RBP11.04□□□□□ -0.64
TARDBP-214ENST00000613177 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
TARDBP-214ENST00000613177 NR1I2O75469 434 aa10.99□□□□□ -0.65
TARDBP-214ENST00000613177 S1PR4O95977 384 aa10.99□□□□□ -0.65
TARDBP-214ENST00000613177 ADH1BP00325 375 aa10.99□□□□□ -0.65
TARDBP-214ENST00000613177 TRAF7Q6Q0C0 670 aa10.98□□□□□ -0.65
TARDBP-214ENST00000613177 ANKLE1Q8NAG6 615 aa10.98□□□□□ -0.65
TARDBP-214ENST00000613177 PHOX2BQ99453 314 aa10.98□□□□□ -0.65
TARDBP-214ENST00000613177 DAXXQ9UER7 740 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-214ENST00000613177 PDZRN3Q9UPQ7 1066 aa10.98□□□□□ -0.65
TARDBP-214ENST00000613177 TRIM67Q6ZTA4 783 aa10.97□□□□□ -0.65
TARDBP-214ENST00000613177 SCUBE3Q8IX30 993 aa10.97□□□□□ -0.65
TARDBP-214ENST00000613177 NLRP7Q8WX94 980 aa10.97□□□□□ -0.65
TARDBP-214ENST00000613177 SLC19A1P41440 591 aa10.96□□□□□ -0.65
TARDBP-214ENST00000613177 RSPH4AQ5TD94 716 aa10.96□□□□□ -0.65
TARDBP-214ENST00000613177 PPEF1O14829 653 aaPredicted RBP10.95□□□□□ -0.66
TARDBP-214ENST00000613177 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
TARDBP-214ENST00000613177 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
TARDBP-214ENST00000613177 SPRYD7Q5W111 196 aa10.93□□□□□ -0.66
TARDBP-214ENST00000613177 DDX11L8A8MPP1 907 aa10.92□□□□□ -0.66
TARDBP-214ENST00000613177 MORN1Q5T089 497 aa10.92□□□□□ -0.66
TARDBP-214ENST00000613177 LIAT1Q6ZQX7 453 aa10.92□□□□□ -0.66
TARDBP-214ENST00000613177 RDH13Q8NBN7 331 aa10.92□□□□□ -0.66
TARDBP-214ENST00000613177 SLC6A16Q9GZN6 736 aa10.92□□□□□ -0.66
TARDBP-214ENST00000613177 FUT2Q10981 343 aa10.9□□□□□ -0.66
TARDBP-214ENST00000613177 PLA2G2CQ5R387 149 aa10.9□□□□□ -0.66
TARDBP-214ENST00000613177 ZNF598Q86UK7 904 aaKnown RBP10.9□□□□□ -0.66
TARDBP-214ENST00000613177 SPSB2Q99619 263 aa10.9□□□□□ -0.66
TARDBP-214ENST00000613177 GCGRP47871 477 aa10.89□□□□□ -0.67
TARDBP-214ENST00000613177 THAP11Q96EK4 314 aa10.89□□□□□ -0.67
TARDBP-214ENST00000613177 SULF1Q8IWU6 871 aa10.88□□□□□ -0.67
TARDBP-214ENST00000613177 ATP6V1AP38606 617 aa10.87□□□□□ -0.67
TARDBP-214ENST00000613177 PRR20EP86478 221 aa10.87□□□□□ -0.67
TARDBP-214ENST00000613177 PRR20CP86479 221 aa10.87□□□□□ -0.67
TARDBP-214ENST00000613177 PRR20DP86480 221 aa10.87□□□□□ -0.67
TARDBP-214ENST00000613177 PRR20BP86481 221 aa10.87□□□□□ -0.67
TARDBP-214ENST00000613177 PRR20AP86496 221 aa10.87□□□□□ -0.67
TARDBP-214ENST00000613177 VSIG10Q8N0Z9 540 aa10.87□□□□□ -0.67
TARDBP-214ENST00000613177 MAP2K5Q13163 448 aa10.85□□□□□ -0.67
TARDBP-214ENST00000613177 ZNF697Q5TEC3 545 aa10.85□□□□□ -0.67
TARDBP-214ENST00000613177 SLC27A5Q9Y2P5 690 aa10.85□□□□□ -0.67
TARDBP-214ENST00000613177 GDF9O60383 454 aa10.83□□□□□ -0.68
TARDBP-214ENST00000613177 FAM160A2Q8N612 972 aaPredicted RBP10.83□□□□□ -0.68
TARDBP-214ENST00000613177 SALL2Q9Y467 1007 aaPredicted RBP10.83□□□□□ -0.68
TARDBP-214ENST00000613177 IRF6O14896 467 aa10.81□□□□□ -0.68
TARDBP-214ENST00000613177 BRICD5Q6PL45 260 aa10.81□□□□□ -0.68
TARDBP-214ENST00000613177 FMNL1O95466 1100 aaPredicted RBP10.8□□□□□ -0.68
TARDBP-214ENST00000613177 CD46P15529 392 aa10.8□□□□□ -0.68
TARDBP-214ENST00000613177 TNFRSF10AO00220 468 aa10.79□□□□□ -0.68
TARDBP-214ENST00000613177 DGAT1O75907 488 aa10.78□□□□□ -0.68
TARDBP-214ENST00000613177 RNF19BQ6ZMZ0 732 aa10.78□□□□□ -0.68
TARDBP-214ENST00000613177 PRDM9Q9NQV7 894 aa10.78□□□□□ -0.68
TARDBP-214ENST00000613177 FCF1Q9Y324 198 aaKnown RBP10.78□□□□□ -0.68
TARDBP-214ENST00000613177 RPIAP49247 311 aa10.77□□□□□ -0.69
TARDBP-214ENST00000613177 MYT1Q01538 1121 aa10.77□□□□□ -0.69
TARDBP-214ENST00000613177 PKD2L1Q9P0L9 805 aa10.77□□□□□ -0.69
TARDBP-214ENST00000613177 MINK1Q8N4C8 1332 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-214ENST00000613177 TULP1O00294 542 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-214ENST00000613177 MSS51Q4VC12 460 aa10.76□□□□□ -0.69
TARDBP-214ENST00000613177 PKDCCQ504Y2 493 aa10.76□□□□□ -0.69
TARDBP-214ENST00000613177 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
TARDBP-214ENST00000613177 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
TARDBP-214ENST00000613177 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
TARDBP-214ENST00000613177 CCDC102AQ96A19 550 aa10.74□□□□□ -0.69
TARDBP-214ENST00000613177 ZNF787Q6DD87 383 aa10.73□□□□□ -0.69
TARDBP-214ENST00000613177 FAM187AA6NFU0 413 aa10.72□□□□□ -0.69
TARDBP-214ENST00000613177 KDM4AO75164 1064 aa10.72□□□□□ -0.69
TARDBP-214ENST00000613177 Q3C1V9 767 aa10.71□□□□□ -0.69
TARDBP-214ENST00000613177 FOXC1Q12948 553 aa10.7□□□□□ -0.7
TARDBP-214ENST00000613177 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
TARDBP-214ENST00000613177 MMP16P51512 607 aa10.69□□□□□ -0.7
TARDBP-214ENST00000613177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms