RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
CSDE1-218ENST00000610726 RRP1P56182 461 aaKnown RBP9.23□□□□□ -0.93
CSDE1-218ENST00000610726 PMFBP1Q8TBY8 1022 aa9.23□□□□□ -0.93
CSDE1-218ENST00000610726 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-218ENST00000610726 COG6Q9Y2V7 657 aa9.23□□□□□ -0.93
CSDE1-218ENST00000610726 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
CSDE1-218ENST00000610726 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
CSDE1-218ENST00000610726 KIF21AQ7Z4S6 1674 aa9.22□□□□□ -0.93
CSDE1-218ENST00000610726 NLRP6P59044 892 aa9.22□□□□□ -0.93
CSDE1-218ENST00000610726 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
CSDE1-218ENST00000610726 CRBNQ96SW2 442 aa9.22□□□□□ -0.93
CSDE1-218ENST00000610726 IDI1Q13907 227 aa9.21□□□□□ -0.93
CSDE1-218ENST00000610726 RUNDC1Q96C34 613 aa9.21□□□□□ -0.93
CSDE1-218ENST00000610726 FANCAO15360 1455 aa9.21□□□□□ -0.93
CSDE1-218ENST00000610726 CDK19Q9BWU1 502 aa9.21□□□□□ -0.94
CSDE1-218ENST00000610726 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
CSDE1-218ENST00000610726 NOP58Q9Y2X3 529 aaKnown RBP9.21□□□□□ -0.94
CSDE1-218ENST00000610726 BRD4O60885 1362 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-218ENST00000610726 KCNJ4P48050 445 aa9.21□□□□□ -0.94
CSDE1-218ENST00000610726 THEMISQ8N1K5 641 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-218ENST00000610726 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
CSDE1-218ENST00000610726 ADGRF5Q8IZF2 1346 aa9.2□□□□□ -0.94
CSDE1-218ENST00000610726 TCP11L2Q8N4U5 519 aa9.2□□□□□ -0.94
CSDE1-218ENST00000610726 ADAMTS12P58397 1594 aa9.19□□□□□ -0.94
CSDE1-218ENST00000610726 RAPGEF6Q8TEU7 1601 aa9.19□□□□□ -0.94
CSDE1-218ENST00000610726 CEBPAP49715 358 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-218ENST00000610726 TAOK2Q9UL54 1235 aa9.19□□□□□ -0.94
CSDE1-218ENST00000610726 NCLP19338 710 aaKnown RBP9.19□□□□□ -0.94
CSDE1-218ENST00000610726 TEFQ10587 303 aa9.19□□□□□ -0.94
CSDE1-218ENST00000610726 PNISRQ8TF01 805 aaKnown RBP9.19□□□□□ -0.94
CSDE1-218ENST00000610726 NECTIN2Q92692 538 aa9.19□□□□□ -0.94
CSDE1-218ENST00000610726 ZKSCAN2Q63HK3 967 aa9.19□□□□□ -0.94
CSDE1-218ENST00000610726 RPGRIP1LQ68CZ1 1315 aa9.18□□□□□ -0.94
CSDE1-218ENST00000610726 UGGT2Q9NYU1 1516 aa9.18□□□□□ -0.94
CSDE1-218ENST00000610726 HSP90AB1P08238 724 aaKnown RBP9.18□□□□□ -0.94
CSDE1-218ENST00000610726 WAPLQ7Z5K2 1190 aa9.18□□□□□ -0.94
CSDE1-218ENST00000610726 ATF3P18847 181 aa9.18□□□□□ -0.94
CSDE1-218ENST00000610726 ESCO1Q5FWF5 840 aa9.17□□□□□ -0.94
CSDE1-218ENST00000610726 C1orf141Q5JVX7 400 aa9.17□□□□□ -0.94
CSDE1-218ENST00000610726 ABTB2Q8N961 1025 aa9.17□□□□□ -0.94
CSDE1-218ENST00000610726 GOLGA6L22H0YM25 854 aa9.17□□□□□ -0.94
CSDE1-218ENST00000610726 EIF2S2P20042 333 aaKnown RBP9.17□□□□□ -0.94
CSDE1-218ENST00000610726 PROSER2Q86WR7 435 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-218ENST00000610726 ASXL2Q76L83 1435 aa9.17□□□□□ -0.94
CSDE1-218ENST00000610726 FGD1P98174 961 aa9.17□□□□□ -0.94
CSDE1-218ENST00000610726 CHMP4AQ9BY43 222 aa9.17□□□□□ -0.94
CSDE1-218ENST00000610726 EIF4G3O43432 1585 aaKnown RBP9.17□□□□□ -0.94
CSDE1-218ENST00000610726 PLCH2O75038 1416 aa9.16□□□□□ -0.94
CSDE1-218ENST00000610726 EIF5BO60841 1220 aaKnown RBP9.16□□□□□ -0.94
CSDE1-218ENST00000610726 EVA1CP58658 441 aa9.16□□□□□ -0.94
CSDE1-218ENST00000610726 ANP32EQ9BTT0 268 aa9.16□□□□□ -0.94
CSDE1-218ENST00000610726 CHMP3Q9Y3E7 222 aa9.16□□□□□ -0.94
CSDE1-218ENST00000610726 RPRD2Q5VT52 1461 aaKnown RBP9.16□□□□□ -0.94
CSDE1-218ENST00000610726 DHX29Q7Z478 1369 aaKnown RBP9.16□□□□□ -0.94
CSDE1-218ENST00000610726 NGEFQ8N5V2 710 aa9.16□□□□□ -0.94
CSDE1-218ENST00000610726 PRKAR2BP31323 418 aa9.16□□□□□ -0.94
CSDE1-218ENST00000610726 KIAA0556O60303 1618 aa9.15□□□□□ -0.94
CSDE1-218ENST00000610726 DENND4BO75064 1496 aaPredicted RBP9.15□□□□□ -0.94
CSDE1-218ENST00000610726 HMMRO75330 724 aa9.15□□□□□ -0.94
CSDE1-218ENST00000610726 MFAP1P55081 439 aaKnown RBP9.15□□□□□ -0.94
CSDE1-218ENST00000610726 HSCBQ8IWL3 235 aa9.15□□□□□ -0.95
CSDE1-218ENST00000610726 NAP1L2Q9ULW6 460 aaPredicted RBP9.15□□□□□ -0.95
CSDE1-218ENST00000610726 CTTNBP2Q8WZ74 1663 aa9.15□□□□□ -0.95
CSDE1-218ENST00000610726 ANKLE2Q86XL3 938 aa9.14□□□□□ -0.95
CSDE1-218ENST00000610726 NLRP2Q9NX02 1062 aa9.14□□□□□ -0.95
CSDE1-218ENST00000610726 DISP1Q96F81 1524 aa9.14□□□□□ -0.95
CSDE1-218ENST00000610726 RTEL1-TNFRSF6BF6WH68 1400 aa9.14□□□□□ -0.95
CSDE1-218ENST00000610726 TRAPPC8Q9Y2L5 1435 aa9.14□□□□□ -0.95
CSDE1-218ENST00000610726 WDR62O43379 1518 aa9.14□□□□□ -0.95
CSDE1-218ENST00000610726 PANK1Q8TE04 598 aa9.14□□□□□ -0.95
CSDE1-218ENST00000610726 NUP160Q12769 1436 aa9.14□□□□□ -0.95
CSDE1-218ENST00000610726 DZIP1LQ8IYY4 767 aaKnown RBP9.14□□□□□ -0.95
CSDE1-218ENST00000610726 SLKQ9H2G2 1235 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-218ENST00000610726 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
CSDE1-218ENST00000610726 CENPQQ7L2Z9 268 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-218ENST00000610726 RBM33Q96EV2 1170 aaKnown RBP9.13□□□□□ -0.95
CSDE1-218ENST00000610726 GNAI1P63096 354 aa9.13□□□□□ -0.95
CSDE1-218ENST00000610726 RRS1Q15050 365 aaKnown RBP9.13□□□□□ -0.95
CSDE1-218ENST00000610726 ANKRD45Q5TZF3 282 aa9.13□□□□□ -0.95
CSDE1-218ENST00000610726 TSPYL4Q9UJ04 414 aa9.13□□□□□ -0.95
CSDE1-218ENST00000610726 CCDC61Q9Y6R9 512 aa9.13□□□□□ -0.95
CSDE1-218ENST00000610726 SYCP2Q9BX26 1530 aa9.12□□□□□ -0.95
CSDE1-218ENST00000610726 POGZQ7Z3K3 1410 aa9.12□□□□□ -0.95
CSDE1-218ENST00000610726 MAPKBP1O60336 1514 aa9.12□□□□□ -0.95
CSDE1-218ENST00000610726 SULT6B1Q6IMI4 303 aa9.12□□□□□ -0.95
CSDE1-218ENST00000610726 TSR2Q969E8 191 aaKnown RBP9.12□□□□□ -0.95
CSDE1-218ENST00000610726 NUDT16Q96DE0 195 aaKnown RBP9.12□□□□□ -0.95
CSDE1-218ENST00000610726 RAPGEF4Q8WZA2 1011 aa9.12□□□□□ -0.95
CSDE1-218ENST00000610726 ZNF692Q9BU19 519 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-218ENST00000610726 XPCQ01831 940 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-218ENST00000610726 FKBP5Q13451 457 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-218ENST00000610726 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
CSDE1-218ENST00000610726 NOS1P29475 1434 aa9.11□□□□□ -0.95
CSDE1-218ENST00000610726 USP35Q9P2H5 1018 aa9.11□□□□□ -0.95
CSDE1-218ENST00000610726 GPRASP1Q5JY77 1395 aa9.11□□□□□ -0.95
CSDE1-218ENST00000610726 MCCP23508 829 aa9.11□□□□□ -0.95
CSDE1-218ENST00000610726 EXOSC9Q06265 439 aaKnown RBP9.11□□□□□ -0.95
CSDE1-218ENST00000610726 TTC5Q8N0Z6 440 aa9.11□□□□□ -0.95
CSDE1-218ENST00000610726 DDX19BQ9UMR2 479 aa9.11□□□□□ -0.95
CSDE1-218ENST00000610726 NSD3Q9BZ95 1437 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms