RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
MUC1-221ENST00000610359 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
MUC1-221ENST00000610359 NUTM2AQ8IVF1 878 aaPredicted RBP11.23□□□□□ -0.61
MUC1-221ENST00000610359 EP400Q96L91 3159 aa11.23□□□□□ -0.61
MUC1-221ENST00000610359 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
MUC1-221ENST00000610359 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
MUC1-221ENST00000610359 IDI1Q13907 227 aa11.21□□□□□ -0.61
MUC1-221ENST00000610359 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
MUC1-221ENST00000610359 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
MUC1-221ENST00000610359 ADRA2BP18089 450 aa11.2□□□□□ -0.62
MUC1-221ENST00000610359 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
MUC1-221ENST00000610359 QTRT2Q9H974 415 aaKnown RBP11.2□□□□□ -0.62
MUC1-221ENST00000610359 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
MUC1-221ENST00000610359 NHSL1Q5SYE7 1610 aa11.19□□□□□ -0.62
MUC1-221ENST00000610359 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
MUC1-221ENST00000610359 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
MUC1-221ENST00000610359 DUOX2Q9NRD8 1548 aa11.18□□□□□ -0.62
MUC1-221ENST00000610359 ATAD2Q6PL18 1390 aa11.17□□□□□ -0.62
MUC1-221ENST00000610359 BRINP3Q76B58 766 aa11.17□□□□□ -0.62
MUC1-221ENST00000610359 C8orf37Q96NL8 207 aa11.16□□□□□ -0.62
MUC1-221ENST00000610359 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
MUC1-221ENST00000610359 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
MUC1-221ENST00000610359 BCANQ96GW7 911 aa11.15□□□□□ -0.62
MUC1-221ENST00000610359 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
MUC1-221ENST00000610359 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
MUC1-221ENST00000610359 GCC2Q8IWJ2 1684 aa11.14□□□□□ -0.63
MUC1-221ENST00000610359 C19orf44Q9H6X5 657 aa11.14□□□□□ -0.63
MUC1-221ENST00000610359 NOS1P29475 1434 aa11.14□□□□□ -0.63
MUC1-221ENST00000610359 PLEKHG1Q9ULL1 1385 aa11.14□□□□□ -0.63
MUC1-221ENST00000610359 LRP5O75197 1615 aa11.13□□□□□ -0.63
MUC1-221ENST00000610359 ATF3P18847 181 aa11.13□□□□□ -0.63
MUC1-221ENST00000610359 C14orf37Q86TY3 774 aa11.13□□□□□ -0.63
MUC1-221ENST00000610359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
MUC1-221ENST00000610359 LMTK2Q8IWU2 1503 aa11.13□□□□□ -0.63
MUC1-221ENST00000610359 CROCC2H7BZ55 1655 aa11.12□□□□□ -0.63
MUC1-221ENST00000610359 PNPLA6Q8IY17 1366 aa11.12□□□□□ -0.63
MUC1-221ENST00000610359 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
MUC1-221ENST00000610359 ERBINQ96RT1 1412 aa11.11□□□□□ -0.63
MUC1-221ENST00000610359 NGLY1Q96IV0 654 aa11.11□□□□□ -0.63
MUC1-221ENST00000610359 TBX22Q9Y458 520 aa11.11□□□□□ -0.63
MUC1-221ENST00000610359 TMEM131LA2VDJ0 1609 aa11.1□□□□□ -0.63
MUC1-221ENST00000610359 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
MUC1-221ENST00000610359 KIF15Q9NS87 1388 aa11.1□□□□□ -0.63
MUC1-221ENST00000610359 MST1RQ04912 1400 aa11.09□□□□□ -0.63
MUC1-221ENST00000610359 RIMS2Q9UQ26 1411 aa11.09□□□□□ -0.63
MUC1-221ENST00000610359 LRRC59Q96AG4 307 aaKnown RBP11.09□□□□□ -0.63
MUC1-221ENST00000610359 BRWD3Q6RI45 1802 aa11.08□□□□□ -0.64
MUC1-221ENST00000610359 ADAMTS2O95450 1211 aa11.08□□□□□ -0.64
MUC1-221ENST00000610359 ATRNO75882 1429 aa11.08□□□□□ -0.64
MUC1-221ENST00000610359 PTPRUQ92729 1446 aa11.08□□□□□ -0.64
MUC1-221ENST00000610359 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
MUC1-221ENST00000610359 RRP7BPQ9NSQ0 103 aa11.07□□□□□ -0.64
MUC1-221ENST00000610359 SLC52A1Q9NWF4 448 aa11.07□□□□□ -0.64
MUC1-221ENST00000610359 DCCP43146 1447 aa11.07□□□□□ -0.64
MUC1-221ENST00000610359 KANK1Q14678 1352 aa11.06□□□□□ -0.64
MUC1-221ENST00000610359 PPP1R15AO75807 674 aaPredicted RBP11.06□□□□□ -0.64
MUC1-221ENST00000610359 PIAS4Q8N2W9 510 aaPredicted RBP11.06□□□□□ -0.64
MUC1-221ENST00000610359 USP21Q9UK80 565 aa11.06□□□□□ -0.64
MUC1-221ENST00000610359 TRPC5Q9UL62 973 aaPredicted RBP11.06□□□□□ -0.64
MUC1-221ENST00000610359 XRN1Q8IZH2 1706 aaKnown RBP11.06□□□□□ -0.64
MUC1-221ENST00000610359 MARF1Q9Y4F3 1742 aaKnown RBP11.06□□□□□ -0.64
MUC1-221ENST00000610359 PIK3R4Q99570 1358 aa11.05□□□□□ -0.64
MUC1-221ENST00000610359 MYOM3Q5VTT5 1437 aa11.05□□□□□ -0.64
MUC1-221ENST00000610359 AMOTL2Q9Y2J4 779 aa11.05□□□□□ -0.64
MUC1-221ENST00000610359 LAMC1P11047 1609 aa11.05□□□□□ -0.64
MUC1-221ENST00000610359 TRPM2O94759 1503 aa11.04□□□□□ -0.64
MUC1-221ENST00000610359 ABCC5O15440 1437 aa11.04□□□□□ -0.64
MUC1-221ENST00000610359 FNBP4Q8N3X1 1017 aaPredicted RBP11.04□□□□□ -0.64
MUC1-221ENST00000610359 NALCNQ8IZF0 1738 aa11.04□□□□□ -0.64
MUC1-221ENST00000610359 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
MUC1-221ENST00000610359 UNC13BO14795 1591 aa11.03□□□□□ -0.64
MUC1-221ENST00000610359 COL22A1Q8NFW1 1626 aaPredicted RBP11.02□□□□□ -0.64
MUC1-221ENST00000610359 NRXN3Q9Y4C0 1643 aa11.02□□□□□ -0.64
MUC1-221ENST00000610359 BLMP54132 1417 aaPredicted RBP11.01□□□□□ -0.65
MUC1-221ENST00000610359 BCL9LQ86UU0 1499 aa11.01□□□□□ -0.65
MUC1-221ENST00000610359 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
MUC1-221ENST00000610359 PTCH1Q13635 1447 aa11.01□□□□□ -0.65
MUC1-221ENST00000610359 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
MUC1-221ENST00000610359 TNKS1BP1Q9C0C2 1729 aaKnown RBP11□□□□□ -0.65
MUC1-221ENST00000610359 GLI3P10071 1580 aa10.99□□□□□ -0.65
MUC1-221ENST00000610359 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.99□□□□□ -0.65
MUC1-221ENST00000610359 SPHKAPQ2M3C7 1700 aa10.98□□□□□ -0.65
MUC1-221ENST00000610359 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
MUC1-221ENST00000610359 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
MUC1-221ENST00000610359 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
MUC1-221ENST00000610359 DAPK1P53355 1430 aa10.98□□□□□ -0.65
MUC1-221ENST00000610359 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
MUC1-221ENST00000610359 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
MUC1-221ENST00000610359 HRCP23327 699 aa10.97□□□□□ -0.65
MUC1-221ENST00000610359 GJD4Q96KN9 370 aaPredicted RBP10.97□□□□□ -0.65
MUC1-221ENST00000610359 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
MUC1-221ENST00000610359 C1orf167Q5SNV9 1468 aa10.97□□□□□ -0.65
MUC1-221ENST00000610359 E9PCH4 1651 aa10.97□□□□□ -0.65
MUC1-221ENST00000610359 MYOM2P54296 1465 aa10.96□□□□□ -0.65
MUC1-221ENST00000610359 CHIC2Q9UKJ5 165 aa10.95□□□□□ -0.66
MUC1-221ENST00000610359 RALGAPBQ86X10 1494 aa10.94□□□□□ -0.66
MUC1-221ENST00000610359 METP08581 1390 aa10.94□□□□□ -0.66
MUC1-221ENST00000610359 ORAI2Q96SN7 254 aa10.94□□□□□ -0.66
MUC1-221ENST00000610359 ANKRD30AQ9BXX3 1397 aa10.93□□□□□ -0.66
MUC1-221ENST00000610359 YY1P25490 414 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms