RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 RRP7BPQ9NSQ0 103 aa14.9□□□□□ -0.02
CTCFL-220ENST00000608858 TET3O43151 1660 aa14.9□□□□□ -0.02
CTCFL-220ENST00000608858 DDX17Q92841 729 aaKnown RBP14.89□□□□□ -0.03
CTCFL-220ENST00000608858 ADAMTS2O95450 1211 aa14.88□□□□□ -0.03
CTCFL-220ENST00000608858 RGS12O14924 1447 aa14.88□□□□□ -0.03
CTCFL-220ENST00000608858 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
CTCFL-220ENST00000608858 SETBP1Q9Y6X0 1596 aa14.87□□□□□ -0.03
CTCFL-220ENST00000608858 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
CTCFL-220ENST00000608858 BRINP3Q76B58 766 aa14.87□□□□□ -0.03
CTCFL-220ENST00000608858 NGLY1Q96IV0 654 aa14.87□□□□□ -0.03
CTCFL-220ENST00000608858 C19orf44Q9H6X5 657 aa14.87□□□□□ -0.03
CTCFL-220ENST00000608858 PPP1R15AO75807 674 aaPredicted RBP14.86□□□□□ -0.03
CTCFL-220ENST00000608858 CADPS2Q86UW7 1296 aa14.86□□□□□ -0.03
CTCFL-220ENST00000608858 CDK12Q9NYV4 1490 aaPredicted RBP14.86□□□□□ -0.03
CTCFL-220ENST00000608858 MROH1Q8NDA8 1641 aa14.85□□□□□ -0.03
CTCFL-220ENST00000608858 EFCAB6Q5THR3 1501 aa14.84□□□□□ -0.03
CTCFL-220ENST00000608858 EHBP1L1Q8N3D4 1523 aa14.83□□□□□ -0.04
CTCFL-220ENST00000608858 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
CTCFL-220ENST00000608858 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
CTCFL-220ENST00000608858 ARHGAP31Q2M1Z3 1444 aa14.82□□□□□ -0.04
CTCFL-220ENST00000608858 LRRC59Q96AG4 307 aaKnown RBP14.81□□□□□ -0.04
CTCFL-220ENST00000608858 ATAD2Q6PL18 1390 aa14.81□□□□□ -0.04
CTCFL-220ENST00000608858 ARHGEF5Q12774 1597 aa14.81□□□□□ -0.04
CTCFL-220ENST00000608858 SHPRHQ149N8 1683 aa14.81□□□□□ -0.04
CTCFL-220ENST00000608858 TBX22Q9Y458 520 aa14.8□□□□□ -0.04
CTCFL-220ENST00000608858 KDM5AP29375 1690 aaKnown RBP14.8□□□□□ -0.04
CTCFL-220ENST00000608858 CHD2O14647 1828 aaKnown RBP14.79□□□□□ -0.04
CTCFL-220ENST00000608858 USP21Q9UK80 565 aa14.79□□□□□ -0.04
CTCFL-220ENST00000608858 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.78□□□□□ -0.04
CTCFL-220ENST00000608858 NWD1Q149M9 1564 aa14.78□□□□□ -0.04
CTCFL-220ENST00000608858 CHIC2Q9UKJ5 165 aa14.78□□□□□ -0.04
CTCFL-220ENST00000608858 AMOTL2Q9Y2J4 779 aa14.78□□□□□ -0.04
CTCFL-220ENST00000608858 KANK1Q14678 1352 aa14.77□□□□□ -0.04
CTCFL-220ENST00000608858 HDGFP51858 240 aaKnown RBP14.77□□□□□ -0.05
CTCFL-220ENST00000608858 AHDC1Q5TGY3 1603 aaPredicted RBP14.77□□□□□ -0.05
CTCFL-220ENST00000608858 EIF2AK4Q9P2K8 1649 aaKnown RBP14.77□□□□□ -0.05
CTCFL-220ENST00000608858 DIP2AQ14689 1571 aa14.76□□□□□ -0.05
CTCFL-220ENST00000608858 KIF15Q9NS87 1388 aa14.75□□□□□ -0.05
CTCFL-220ENST00000608858 SLC52A1Q9NWF4 448 aa14.75□□□□□ -0.05
CTCFL-220ENST00000608858 MAST1Q9Y2H9 1570 aa14.75□□□□□ -0.05
CTCFL-220ENST00000608858 DUOX2Q9NRD8 1548 aa14.75□□□□□ -0.05
CTCFL-220ENST00000608858 PLEKHG1Q9ULL1 1385 aa14.74□□□□□ -0.05
CTCFL-220ENST00000608858 DEFB132Q7Z7B7 95 aa14.74□□□□□ -0.05
CTCFL-220ENST00000608858 TRPC5Q9UL62 973 aaPredicted RBP14.74□□□□□ -0.05
CTCFL-220ENST00000608858 RIMS2Q9UQ26 1411 aa14.74□□□□□ -0.05
CTCFL-220ENST00000608858 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
CTCFL-220ENST00000608858 NCOA3Q9Y6Q9 1424 aa14.72□□□□□ -0.05
CTCFL-220ENST00000608858 PNPLA6Q8IY17 1366 aa14.72□□□□□ -0.05
CTCFL-220ENST00000608858 CCDC125Q86Z20 511 aa14.71□□□□□ -0.05
CTCFL-220ENST00000608858 SETD5Q9C0A6 1442 aa14.71□□□□□ -0.05
CTCFL-220ENST00000608858 MYO5BQ9ULV0 1848 aa14.69□□□□□ -0.06
CTCFL-220ENST00000608858 ZFYVE9O95405 1425 aa14.69□□□□□ -0.06
CTCFL-220ENST00000608858 PSDA5PKW4 1024 aaPredicted RBP14.69□□□□□ -0.06
CTCFL-220ENST00000608858 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.69□□□□□ -0.06
CTCFL-220ENST00000608858 ADGRB3O60242 1522 aa14.69□□□□□ -0.06
CTCFL-220ENST00000608858 NOS1P29475 1434 aa14.68□□□□□ -0.06
CTCFL-220ENST00000608858 ASXL1Q8IXJ9 1541 aa14.68□□□□□ -0.06
CTCFL-220ENST00000608858 PTPRUQ92729 1446 aa14.67□□□□□ -0.06
CTCFL-220ENST00000608858 MYOM3Q5VTT5 1437 aa14.66□□□□□ -0.06
CTCFL-220ENST00000608858 ADAMTS13Q76LX8 1427 aa14.66□□□□□ -0.06
CTCFL-220ENST00000608858 FNBP4Q8N3X1 1017 aaPredicted RBP14.66□□□□□ -0.06
CTCFL-220ENST00000608858 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
CTCFL-220ENST00000608858 EP400Q96L91 3159 aa14.65□□□□□ -0.06
CTCFL-220ENST00000608858 ORAI2Q96SN7 254 aa14.65□□□□□ -0.06
CTCFL-220ENST00000608858 ABCC5O15440 1437 aa14.65□□□□□ -0.06
CTCFL-220ENST00000608858 MST1RQ04912 1400 aa14.65□□□□□ -0.06
CTCFL-220ENST00000608858 ERBINQ96RT1 1412 aa14.65□□□□□ -0.06
CTCFL-220ENST00000608858 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
CTCFL-220ENST00000608858 GJD4Q96KN9 370 aaPredicted RBP14.63□□□□□ -0.07
CTCFL-220ENST00000608858 SF3B2Q13435 895 aaKnown RBP14.62□□□□□ -0.07
CTCFL-220ENST00000608858 ATRNO75882 1429 aa14.6□□□□□ -0.07
CTCFL-220ENST00000608858 GCC2Q8IWJ2 1684 aa14.6□□□□□ -0.07
CTCFL-220ENST00000608858 LMTK2Q8IWU2 1503 aa14.6□□□□□ -0.07
CTCFL-220ENST00000608858 NHSL1Q5SYE7 1610 aa14.59□□□□□ -0.07
CTCFL-220ENST00000608858 HRCP23327 699 aa14.59□□□□□ -0.07
CTCFL-220ENST00000608858 TMEM131LA2VDJ0 1609 aa14.59□□□□□ -0.07
CTCFL-220ENST00000608858 PIK3R4Q99570 1358 aa14.59□□□□□ -0.07
CTCFL-220ENST00000608858 XPCQ01831 940 aaPredicted RBP14.58□□□□□ -0.08
CTCFL-220ENST00000608858 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
CTCFL-220ENST00000608858 ANKRD30AQ9BXX3 1397 aa14.57□□□□□ -0.08
CTCFL-220ENST00000608858 BLMP54132 1417 aaPredicted RBP14.57□□□□□ -0.08
CTCFL-220ENST00000608858 BCL9LQ86UU0 1499 aa14.57□□□□□ -0.08
CTCFL-220ENST00000608858 YY1P25490 414 aa14.56□□□□□ -0.08
CTCFL-220ENST00000608858 SOS2Q07890 1332 aaPredicted RBP14.56□□□□□ -0.08
CTCFL-220ENST00000608858 METP08581 1390 aa14.56□□□□□ -0.08
CTCFL-220ENST00000608858 ZNF326Q5BKZ1 582 aaKnown RBP14.55□□□□□ -0.08
CTCFL-220ENST00000608858 DCCP43146 1447 aa14.55□□□□□ -0.08
CTCFL-220ENST00000608858 DAPK1P53355 1430 aa14.55□□□□□ -0.08
CTCFL-220ENST00000608858 SEPT12Q8IYM1 358 aa14.54□□□□□ -0.08
CTCFL-220ENST00000608858 TRPM2O94759 1503 aa14.54□□□□□ -0.08
CTCFL-220ENST00000608858 C1orf167Q5SNV9 1468 aa14.53□□□□□ -0.08
CTCFL-220ENST00000608858 R3HDM1Q15032 1099 aaKnown RBP14.53□□□□□ -0.08
CTCFL-220ENST00000608858 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
CTCFL-220ENST00000608858 PTCH1Q13635 1447 aa14.52□□□□□ -0.08
CTCFL-220ENST00000608858 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
CTCFL-220ENST00000608858 CCDC9Q9Y3X0 531 aaKnown RBP14.52□□□□□ -0.09
CTCFL-220ENST00000608858 ADGRL3Q9HAR2 1447 aa14.51□□□□□ -0.09
CTCFL-220ENST00000608858 EN1Q05925 392 aaPredicted RBP14.51□□□□□ -0.09
CTCFL-220ENST00000608858 ESCO1Q5FWF5 840 aa14.51□□□□□ -0.09
CTCFL-220ENST00000608858 NUTM2FA1L443 756 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms