RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 NECTIN2Q92692 538 aa12.06□□□□□ -0.48
SH3D19-213ENST00000604922 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
SH3D19-213ENST00000604922 NYAP1Q6ZVC0 841 aa12.05□□□□□ -0.48
SH3D19-213ENST00000604922 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
SH3D19-213ENST00000604922 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
SH3D19-213ENST00000604922 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
SH3D19-213ENST00000604922 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
SH3D19-213ENST00000604922 TMEM134Q9H6X4 195 aa12.03□□□□□ -0.48
SH3D19-213ENST00000604922 WBP1LQ9NX94 342 aa12.03□□□□□ -0.48
SH3D19-213ENST00000604922 IRF6O14896 467 aa12.02□□□□□ -0.49
SH3D19-213ENST00000604922 A0A0G2JS52 829 aa12.01□□□□□ -0.49
SH3D19-213ENST00000604922 ZMYND10O75800 440 aa12□□□□□ -0.49
SH3D19-213ENST00000604922 BARGINQ6ZT62 677 aa11.99□□□□□ -0.49
SH3D19-213ENST00000604922 Q6ZNB5 142 aa11.98□□□□□ -0.49
SH3D19-213ENST00000604922 RSPH4AQ5TD94 716 aa11.97□□□□□ -0.49
SH3D19-213ENST00000604922 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
SH3D19-213ENST00000604922 DAXXQ9UER7 740 aaPredicted RBP11.95□□□□□ -0.5
SH3D19-213ENST00000604922 PRR14Q9BWN1 585 aa11.94□□□□□ -0.5
SH3D19-213ENST00000604922 PHOX2BQ99453 314 aa11.93□□□□□ -0.5
SH3D19-213ENST00000604922 SULF1Q8IWU6 871 aa11.91□□□□□ -0.5
SH3D19-213ENST00000604922 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
SH3D19-213ENST00000604922 KMT5BQ4FZB7 885 aa11.9□□□□□ -0.5
SH3D19-213ENST00000604922 LCE2BO14633 110 aa11.89□□□□□ -0.51
SH3D19-213ENST00000604922 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
SH3D19-213ENST00000604922 APLP1P51693 650 aa11.88□□□□□ -0.51
SH3D19-213ENST00000604922 RDH13Q8NBN7 331 aa11.88□□□□□ -0.51
SH3D19-213ENST00000604922 MDM2Q00987 491 aaPredicted RBP11.87□□□□□ -0.51
SH3D19-213ENST00000604922 CFHP08603 1231 aa11.86□□□□□ -0.51
SH3D19-213ENST00000604922 SLC10A3P09131 477 aa11.86□□□□□ -0.51
SH3D19-213ENST00000604922 CLCN1P35523 988 aa11.86□□□□□ -0.51
SH3D19-213ENST00000604922 AK7Q96M32 723 aa11.86□□□□□ -0.51
SH3D19-213ENST00000604922 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
SH3D19-213ENST00000604922 KCNC4Q03721 635 aa11.84□□□□□ -0.51
SH3D19-213ENST00000604922 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
SH3D19-213ENST00000604922 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
SH3D19-213ENST00000604922 ACTN4O43707 911 aaKnown RBP11.82□□□□□ -0.52
SH3D19-213ENST00000604922 IL21Q9HBE4 155 aa11.82□□□□□ -0.52
SH3D19-213ENST00000604922 MTRQ99707 1265 aa11.81□□□□□ -0.52
SH3D19-213ENST00000604922 TTLL12Q14166 644 aaPredicted RBP11.8□□□□□ -0.52
SH3D19-213ENST00000604922 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
SH3D19-213ENST00000604922 AMHR2Q16671 573 aa11.79□□□□□ -0.52
SH3D19-213ENST00000604922 TJAP1Q5JTD0 557 aa11.79□□□□□ -0.52
SH3D19-213ENST00000604922 TRIM66O15016 1216 aa11.78□□□□□ -0.52
SH3D19-213ENST00000604922 COPS2P61201 443 aa11.78□□□□□ -0.52
SH3D19-213ENST00000604922 CD46P15529 392 aa11.77□□□□□ -0.53
SH3D19-213ENST00000604922 GCGRP47871 477 aa11.77□□□□□ -0.53
SH3D19-213ENST00000604922 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
SH3D19-213ENST00000604922 TMUB1Q9BVT8 246 aa11.75□□□□□ -0.53
SH3D19-213ENST00000604922 BLOC1S3Q6QNY0 202 aa11.74□□□□□ -0.53
SH3D19-213ENST00000604922 NR1I2O75469 434 aa11.73□□□□□ -0.53
SH3D19-213ENST00000604922 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
SH3D19-213ENST00000604922 GRIPAP1Q4V328 841 aa11.73□□□□□ -0.53
SH3D19-213ENST00000604922 ZPR1O75312 459 aa11.72□□□□□ -0.53
SH3D19-213ENST00000604922 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
SH3D19-213ENST00000604922 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
SH3D19-213ENST00000604922 REPIN1Q9BWE0 567 aaKnown RBP11.72□□□□□ -0.53
SH3D19-213ENST00000604922 FUT2Q10981 343 aa11.71□□□□□ -0.53
SH3D19-213ENST00000604922 TRAF7Q6Q0C0 670 aa11.71□□□□□ -0.53
SH3D19-213ENST00000604922 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.53
SH3D19-213ENST00000604922 PDE4DQ08499 809 aa11.7□□□□□ -0.54
SH3D19-213ENST00000604922 KDM4AO75164 1064 aa11.69□□□□□ -0.54
SH3D19-213ENST00000604922 PUS10Q3MIT2 529 aaKnown RBP11.69□□□□□ -0.54
SH3D19-213ENST00000604922 PARP9Q8IXQ6 854 aa11.69□□□□□ -0.54
SH3D19-213ENST00000604922 USP46P62068 366 aa11.68□□□□□ -0.54
SH3D19-213ENST00000604922 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
SH3D19-213ENST00000604922 SCUBE3Q8IX30 993 aa11.67□□□□□ -0.54
SH3D19-213ENST00000604922 MORN1Q5T089 497 aa11.66□□□□□ -0.54
SH3D19-213ENST00000604922 GGCXP38435 758 aa11.65□□□□□ -0.54
SH3D19-213ENST00000604922 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
SH3D19-213ENST00000604922 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
SH3D19-213ENST00000604922 BEGAINQ9BUH8 593 aa11.62□□□□□ -0.55
SH3D19-213ENST00000604922 SLC27A5Q9Y2P5 690 aa11.62□□□□□ -0.55
SH3D19-213ENST00000604922 LAPTM4AQ15012 233 aa11.61□□□□□ -0.55
SH3D19-213ENST00000604922 TLL1O43897 1013 aa11.6□□□□□ -0.55
SH3D19-213ENST00000604922 FMNL1O95466 1100 aaPredicted RBP11.6□□□□□ -0.55
SH3D19-213ENST00000604922 ADH1BP00325 375 aa11.6□□□□□ -0.55
SH3D19-213ENST00000604922 DIXDC1Q155Q3 683 aa11.6□□□□□ -0.55
SH3D19-213ENST00000604922 Q3C1V9 767 aa11.6□□□□□ -0.55
SH3D19-213ENST00000604922 PPP1R18Q6NYC8 613 aa11.6□□□□□ -0.55
SH3D19-213ENST00000604922 SPSB2Q99619 263 aa11.6□□□□□ -0.55
SH3D19-213ENST00000604922 HOXA2O43364 376 aa11.59□□□□□ -0.55
SH3D19-213ENST00000604922 MS4A1P11836 297 aa11.59□□□□□ -0.55
SH3D19-213ENST00000604922 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.59□□□□□ -0.55
SH3D19-213ENST00000604922 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
SH3D19-213ENST00000604922 SPIRE2Q8WWL2 714 aa11.58□□□□□ -0.56
SH3D19-213ENST00000604922 GFRA3O60609 400 aa11.57□□□□□ -0.56
SH3D19-213ENST00000604922 SLC6A16Q9GZN6 736 aa11.56□□□□□ -0.56
SH3D19-213ENST00000604922 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
SH3D19-213ENST00000604922 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
SH3D19-213ENST00000604922 THAP11Q96EK4 314 aa11.55□□□□□ -0.56
SH3D19-213ENST00000604922 S1PR4O95977 384 aa11.53□□□□□ -0.56
SH3D19-213ENST00000604922 FDX1P10109 184 aa11.53□□□□□ -0.56
SH3D19-213ENST00000604922 HLA-CQ95604 372 aa11.53□□□□□ -0.56
SH3D19-213ENST00000604922 TBC1D2Q9BYX2 928 aa11.53□□□□□ -0.56
SH3D19-213ENST00000604922 RNF19BQ6ZMZ0 732 aa11.52□□□□□ -0.57
SH3D19-213ENST00000604922 ZNF787Q6DD87 383 aa11.51□□□□□ -0.57
SH3D19-213ENST00000604922 KDM4CQ9H3R0 1056 aa11.51□□□□□ -0.57
SH3D19-213ENST00000604922 MOXD2PA6NHM9 499 aa11.5□□□□□ -0.57
SH3D19-213ENST00000604922 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
SH3D19-213ENST00000604922 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms