RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 CD109Q6YHK3 1445 aa17.24■□□□□ 0.35
SRGAP2-209ENST00000604247 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
SRGAP2-209ENST00000604247 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
SRGAP2-209ENST00000604247 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
SRGAP2-209ENST00000604247 INSRP06213 1382 aa17.22■□□□□ 0.35
SRGAP2-209ENST00000604247 ZNF518AQ6AHZ1 1483 aa17.22■□□□□ 0.35
SRGAP2-209ENST00000604247 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
SRGAP2-209ENST00000604247 KANK1Q14678 1352 aa17.21■□□□□ 0.35
SRGAP2-209ENST00000604247 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.34
SRGAP2-209ENST00000604247 STAC3Q96MF2 364 aa17.21■□□□□ 0.34
SRGAP2-209ENST00000604247 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
SRGAP2-209ENST00000604247 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
SRGAP2-209ENST00000604247 FRMPD1Q5SYB0 1578 aa17.2■□□□□ 0.34
SRGAP2-209ENST00000604247 CDCA8Q53HL2 280 aa17.2■□□□□ 0.34
SRGAP2-209ENST00000604247 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
SRGAP2-209ENST00000604247 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
SRGAP2-209ENST00000604247 PPRC1Q5VV67 1664 aaKnown RBP17.18■□□□□ 0.34
SRGAP2-209ENST00000604247 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
SRGAP2-209ENST00000604247 EFCAB6Q5THR3 1501 aa17.17■□□□□ 0.34
SRGAP2-209ENST00000604247 RAPGEF3O95398 923 aa17.16■□□□□ 0.34
SRGAP2-209ENST00000604247 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
SRGAP2-209ENST00000604247 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
SRGAP2-209ENST00000604247 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
SRGAP2-209ENST00000604247 SYNMO15061 1565 aa17.16■□□□□ 0.34
SRGAP2-209ENST00000604247 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
SRGAP2-209ENST00000604247 IPO9Q96P70 1041 aaKnown RBP17.14■□□□□ 0.34
SRGAP2-209ENST00000604247 MLH3Q9UHC1 1453 aa17.14■□□□□ 0.34
SRGAP2-209ENST00000604247 ASXL1Q8IXJ9 1541 aa17.14■□□□□ 0.33
SRGAP2-209ENST00000604247 MYOM1P52179 1685 aa17.14■□□□□ 0.33
SRGAP2-209ENST00000604247 C20orf194Q5TEA3 1177 aa17.13■□□□□ 0.33
SRGAP2-209ENST00000604247 EIF3AQ14152 1382 aaKnown RBP17.13■□□□□ 0.33
SRGAP2-209ENST00000604247 LMTK2Q8IWU2 1503 aa17.13■□□□□ 0.33
SRGAP2-209ENST00000604247 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
SRGAP2-209ENST00000604247 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
SRGAP2-209ENST00000604247 GGT6Q6P531 493 aa17.12■□□□□ 0.33
SRGAP2-209ENST00000604247 NPATQ14207 1427 aa17.11■□□□□ 0.33
SRGAP2-209ENST00000604247 ABCA6Q8N139 1617 aa17.11■□□□□ 0.33
SRGAP2-209ENST00000604247 SKAP1Q86WV1 359 aa17.11■□□□□ 0.33
SRGAP2-209ENST00000604247 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
SRGAP2-209ENST00000604247 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
SRGAP2-209ENST00000604247 MROH2AA6NES4 1674 aa17.1■□□□□ 0.33
SRGAP2-209ENST00000604247 ZNF521Q96K83 1311 aa17.1■□□□□ 0.33
SRGAP2-209ENST00000604247 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
SRGAP2-209ENST00000604247 PDE4AP27815 886 aa17.1■□□□□ 0.33
SRGAP2-209ENST00000604247 MAP3K4Q9Y6R4 1608 aa17.1■□□□□ 0.33
SRGAP2-209ENST00000604247 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
SRGAP2-209ENST00000604247 KDM5AP29375 1690 aaKnown RBP17.09■□□□□ 0.33
SRGAP2-209ENST00000604247 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
SRGAP2-209ENST00000604247 KIF1BO60333 1816 aa17.09■□□□□ 0.33
SRGAP2-209ENST00000604247 GOLGA2Q08379 1002 aa17.09■□□□□ 0.33
SRGAP2-209ENST00000604247 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
SRGAP2-209ENST00000604247 PIK3C2GO75747 1445 aa17.09■□□□□ 0.33
SRGAP2-209ENST00000604247 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.33
SRGAP2-209ENST00000604247 NPC1L1Q9UHC9 1359 aa17.08■□□□□ 0.33
SRGAP2-209ENST00000604247 ERVK-7P63135 1459 aa17.08■□□□□ 0.33
SRGAP2-209ENST00000604247 CFAP74Q9C0B2 1584 aa17.08■□□□□ 0.33
SRGAP2-209ENST00000604247 NBR1Q14596 966 aa17.08■□□□□ 0.32
SRGAP2-209ENST00000604247 MYOM2P54296 1465 aa17.07■□□□□ 0.32
SRGAP2-209ENST00000604247 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
SRGAP2-209ENST00000604247 CFAP65Q6ZU64 1925 aaKnown RBP17.07■□□□□ 0.32
SRGAP2-209ENST00000604247 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
SRGAP2-209ENST00000604247 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
SRGAP2-209ENST00000604247 NEO1Q92859 1461 aa17.06■□□□□ 0.32
SRGAP2-209ENST00000604247 APAF1O14727 1248 aa17.05■□□□□ 0.32
SRGAP2-209ENST00000604247 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
SRGAP2-209ENST00000604247 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
SRGAP2-209ENST00000604247 ABCC3O15438 1527 aa17.05■□□□□ 0.32
SRGAP2-209ENST00000604247 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
SRGAP2-209ENST00000604247 MS4A1P11836 297 aa17.05■□□□□ 0.32
SRGAP2-209ENST00000604247 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
SRGAP2-209ENST00000604247 NOS1P29475 1434 aa17.05■□□□□ 0.32
SRGAP2-209ENST00000604247 IFT172Q9UG01 1749 aa17.04■□□□□ 0.32
SRGAP2-209ENST00000604247 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
SRGAP2-209ENST00000604247 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
SRGAP2-209ENST00000604247 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
SRGAP2-209ENST00000604247 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
SRGAP2-209ENST00000604247 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
SRGAP2-209ENST00000604247 TRMT2AQ8IZ69 625 aaKnown RBP17.01■□□□□ 0.31
SRGAP2-209ENST00000604247 BCL11AQ9H165 835 aa17.01■□□□□ 0.31
SRGAP2-209ENST00000604247 KDM2BQ8NHM5 1336 aa16.99■□□□□ 0.31
SRGAP2-209ENST00000604247 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
SRGAP2-209ENST00000604247 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
SRGAP2-209ENST00000604247 RICTORQ6R327 1708 aa16.99■□□□□ 0.31
SRGAP2-209ENST00000604247 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
SRGAP2-209ENST00000604247 SLC12A5Q9H2X9 1139 aa16.98■□□□□ 0.31
SRGAP2-209ENST00000604247 NUTM2DQ5VT03 806 aaPredicted RBP16.97■□□□□ 0.31
SRGAP2-209ENST00000604247 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
SRGAP2-209ENST00000604247 BCAR3O75815 825 aa16.96■□□□□ 0.31
SRGAP2-209ENST00000604247 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
SRGAP2-209ENST00000604247 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
SRGAP2-209ENST00000604247 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
SRGAP2-209ENST00000604247 SBNO2Q9Y2G9 1366 aa16.96■□□□□ 0.31
SRGAP2-209ENST00000604247 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.31
SRGAP2-209ENST00000604247 MYO3AQ8NEV4 1616 aa16.96■□□□□ 0.3
SRGAP2-209ENST00000604247 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
SRGAP2-209ENST00000604247 CENPQQ7L2Z9 268 aaPredicted RBP16.94■□□□□ 0.3
SRGAP2-209ENST00000604247 PPLO60437 1756 aa16.94■□□□□ 0.3
SRGAP2-209ENST00000604247 NKTRP30414 1462 aaKnown RBP16.94■□□□□ 0.3
SRGAP2-209ENST00000604247 E9PSI1 815 aa16.93■□□□□ 0.3
SRGAP2-209ENST00000604247 MORC1Q86VD1 984 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms