RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 NFX1Q12986 1120 aaKnown RBP10.17□□□□□ -0.78
FOCAD-208ENST00000603648 ZNF697Q5TEC3 545 aa10.17□□□□□ -0.78
FOCAD-208ENST00000603648 HDGFP51858 240 aaKnown RBP10.16□□□□□ -0.78
FOCAD-208ENST00000603648 NBR1Q14596 966 aa10.16□□□□□ -0.78
FOCAD-208ENST00000603648 C11orf95C9JLR9 678 aaPredicted RBP10.15□□□□□ -0.78
FOCAD-208ENST00000603648 DPYSL4O14531 572 aa10.15□□□□□ -0.78
FOCAD-208ENST00000603648 ZPR1O75312 459 aa10.14□□□□□ -0.79
FOCAD-208ENST00000603648 GDF9O60383 454 aa10.13□□□□□ -0.79
FOCAD-208ENST00000603648 PDIA6Q15084 440 aa10.12□□□□□ -0.79
FOCAD-208ENST00000603648 GMPR2Q9P2T1 348 aaKnown RBP10.12□□□□□ -0.79
FOCAD-208ENST00000603648 DACH1Q9UI36 760 aa10.12□□□□□ -0.79
FOCAD-208ENST00000603648 SPDYE16A6NNV3 312 aaPredicted RBP10.11□□□□□ -0.79
FOCAD-208ENST00000603648 TSR1Q2NL82 804 aaKnown RBP10.11□□□□□ -0.79
FOCAD-208ENST00000603648 DDX12PQ92771 950 aa10.11□□□□□ -0.79
FOCAD-208ENST00000603648 CDCA7LQ96GN5 454 aa10.11□□□□□ -0.79
FOCAD-208ENST00000603648 PNMA3Q9UL41 463 aa10.11□□□□□ -0.79
FOCAD-208ENST00000603648 MAP3K7O43318 606 aa10.1□□□□□ -0.79
FOCAD-208ENST00000603648 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
FOCAD-208ENST00000603648 TATDN2Q93075 761 aa10.1□□□□□ -0.79
FOCAD-208ENST00000603648 NBPF26B4DH59 902 aa10.09□□□□□ -0.79
FOCAD-208ENST00000603648 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
FOCAD-208ENST00000603648 C3orf80F5H4A9 247 aa10.08□□□□□ -0.8
FOCAD-208ENST00000603648 SUZ12Q15022 739 aaKnown RBP10.08□□□□□ -0.8
FOCAD-208ENST00000603648 ANKLE1Q8NAG6 615 aa10.08□□□□□ -0.8
FOCAD-208ENST00000603648 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
FOCAD-208ENST00000603648 FAM181BA6NEQ2 426 aa10.07□□□□□ -0.8
FOCAD-208ENST00000603648 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
FOCAD-208ENST00000603648 SEMA3EO15041 775 aa10.07□□□□□ -0.8
FOCAD-208ENST00000603648 PRSS12P56730 875 aa10.07□□□□□ -0.8
FOCAD-208ENST00000603648 EN1Q05925 392 aaPredicted RBP10.07□□□□□ -0.8
FOCAD-208ENST00000603648 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
FOCAD-208ENST00000603648 CRIPAKQ8N1N5 446 aa10.05□□□□□ -0.8
FOCAD-208ENST00000603648 AXIN1O15169 862 aa10.03□□□□□ -0.8
FOCAD-208ENST00000603648 LCE2CQ5TA81 110 aa10.03□□□□□ -0.8
FOCAD-208ENST00000603648 PCDHB3Q9Y5E6 796 aa10.02□□□□□ -0.81
FOCAD-208ENST00000603648 TLL1O43897 1013 aa10.01□□□□□ -0.81
FOCAD-208ENST00000603648 FOXC1Q12948 553 aa10.01□□□□□ -0.81
FOCAD-208ENST00000603648 NUDT18Q6ZVK8 323 aa10.01□□□□□ -0.81
FOCAD-208ENST00000603648 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
FOCAD-208ENST00000603648 S1PR4O95977 384 aa10□□□□□ -0.81
FOCAD-208ENST00000603648 MLLT3P42568 568 aaPredicted RBP10□□□□□ -0.81
FOCAD-208ENST00000603648 TERTO14746 1132 aaKnown RBP9.99□□□□□ -0.81
FOCAD-208ENST00000603648 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
FOCAD-208ENST00000603648 BLOC1S3Q6QNY0 202 aa9.99□□□□□ -0.81
FOCAD-208ENST00000603648 SMYD5Q6GMV2 418 aa9.98□□□□□ -0.81
FOCAD-208ENST00000603648 TULP1O00294 542 aaPredicted RBP9.96□□□□□ -0.82
FOCAD-208ENST00000603648 AVPP01185 164 aa9.96□□□□□ -0.82
FOCAD-208ENST00000603648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.96□□□□□ -0.82
FOCAD-208ENST00000603648 CERKQ8TCT0 537 aa9.96□□□□□ -0.82
FOCAD-208ENST00000603648 PRR14Q9BWN1 585 aa9.96□□□□□ -0.82
FOCAD-208ENST00000603648 PKD2L1Q9P0L9 805 aa9.96□□□□□ -0.82
FOCAD-208ENST00000603648 SLC4A3P48751 1232 aa9.95□□□□□ -0.82
FOCAD-208ENST00000603648 CTC1Q2NKJ3 1217 aa9.95□□□□□ -0.82
FOCAD-208ENST00000603648 GRXCR2A6NFK2 248 aa9.93□□□□□ -0.82
FOCAD-208ENST00000603648 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
FOCAD-208ENST00000603648 OSBPP22059 807 aa9.92□□□□□ -0.82
FOCAD-208ENST00000603648 SNRPBP14678 240 aaKnown RBP9.91□□□□□ -0.82
FOCAD-208ENST00000603648 PLA2G2CQ5R387 149 aa9.91□□□□□ -0.82
FOCAD-208ENST00000603648 CYP4X1Q8N118 509 aa9.9□□□□□ -0.82
FOCAD-208ENST00000603648 ZSCAN1Q8NBB4 408 aa9.9□□□□□ -0.82
FOCAD-208ENST00000603648 SMCPP49901 116 aaPredicted RBP9.88□□□□□ -0.83
FOCAD-208ENST00000603648 RBM26Q5T8P6 1007 aaKnown RBP9.88□□□□□ -0.83
FOCAD-208ENST00000603648 TOR4AQ9NXH8 423 aa9.88□□□□□ -0.83
FOCAD-208ENST00000603648 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
FOCAD-208ENST00000603648 SLC6A16Q9GZN6 736 aa9.85□□□□□ -0.83
FOCAD-208ENST00000603648 ATP13A2Q9NQ11 1180 aa9.85□□□□□ -0.83
FOCAD-208ENST00000603648 ADH1BP00325 375 aa9.84□□□□□ -0.83
FOCAD-208ENST00000603648 SLC16A10Q8TF71 515 aa9.84□□□□□ -0.83
FOCAD-208ENST00000603648 TRIM47Q96LD4 638 aa9.83□□□□□ -0.84
FOCAD-208ENST00000603648 SENP2Q9HC62 589 aa9.83□□□□□ -0.84
FOCAD-208ENST00000603648 RBM27Q9P2N5 1060 aaKnown RBP9.83□□□□□ -0.84
FOCAD-208ENST00000603648 GPIHBP1Q8IV16 184 aa9.82□□□□□ -0.84
FOCAD-208ENST00000603648 LORP23490 312 aaPredicted RBP9.81□□□□□ -0.84
FOCAD-208ENST00000603648 GMPRP36959 345 aa9.81□□□□□ -0.84
FOCAD-208ENST00000603648 GPR37O15354 613 aa9.8□□□□□ -0.84
FOCAD-208ENST00000603648 CDHR5Q9HBB8 845 aa9.8□□□□□ -0.84
FOCAD-208ENST00000603648 NUTM2FA1L443 756 aa9.79□□□□□ -0.84
FOCAD-208ENST00000603648 TTC24A2A3L6 582 aaPredicted RBP9.79□□□□□ -0.84
FOCAD-208ENST00000603648 TPRNQ4KMQ1 711 aa9.79□□□□□ -0.84
FOCAD-208ENST00000603648 ZC3H15Q8WU90 426 aaKnown RBP9.79□□□□□ -0.84
FOCAD-208ENST00000603648 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.85
FOCAD-208ENST00000603648 ACTN4O43707 911 aaKnown RBP9.76□□□□□ -0.85
FOCAD-208ENST00000603648 CD2BP2O95400 341 aaKnown RBP9.76□□□□□ -0.85
FOCAD-208ENST00000603648 RPIAP49247 311 aa9.76□□□□□ -0.85
FOCAD-208ENST00000603648 PTGDRQ13258 359 aa9.76□□□□□ -0.85
FOCAD-208ENST00000603648 PADI6Q6TGC4 694 aa9.76□□□□□ -0.85
FOCAD-208ENST00000603648 NPDC1Q9NQX5 325 aaPredicted RBP9.76□□□□□ -0.85
FOCAD-208ENST00000603648 NR1I2O75469 434 aa9.75□□□□□ -0.85
FOCAD-208ENST00000603648 FCHSD2O94868 740 aa9.75□□□□□ -0.85
FOCAD-208ENST00000603648 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
FOCAD-208ENST00000603648 KIFC2Q96AC6 838 aa9.75□□□□□ -0.85
FOCAD-208ENST00000603648 ZMYND10O75800 440 aa9.74□□□□□ -0.85
FOCAD-208ENST00000603648 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
FOCAD-208ENST00000603648 HIC1Q14526 733 aa9.73□□□□□ -0.85
FOCAD-208ENST00000603648 TTC13Q8NBP0 860 aa9.73□□□□□ -0.85
FOCAD-208ENST00000603648 IRF7Q92985 503 aa9.73□□□□□ -0.85
FOCAD-208ENST00000603648 EYA1Q99502 592 aa9.72□□□□□ -0.85
FOCAD-208ENST00000603648 NXF1Q9UBU9 619 aaKnown RBP9.72□□□□□ -0.85
FOCAD-208ENST00000603648 GNPATO15228 680 aa9.71□□□□□ -0.86
FOCAD-208ENST00000603648 BARGINQ6ZT62 677 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms