RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 FYCO1Q9BQS8 1478 aa11.47□□□□□ -0.57
HCG18-248ENST00000602861 MLH3Q9UHC1 1453 aa11.47□□□□□ -0.57
HCG18-248ENST00000602861 UHRF1BP1Q6BDS2 1440 aa11.47□□□□□ -0.57
HCG18-248ENST00000602861 TRAPPC8Q9Y2L5 1435 aa11.47□□□□□ -0.57
HCG18-248ENST00000602861 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
HCG18-248ENST00000602861 RAB3GAP2Q9H2M9 1393 aa11.46□□□□□ -0.57
HCG18-248ENST00000602861 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.58
HCG18-248ENST00000602861 ITSN2Q9NZM3 1697 aa11.46□□□□□ -0.58
HCG18-248ENST00000602861 CERKQ8TCT0 537 aa11.45□□□□□ -0.58
HCG18-248ENST00000602861 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
HCG18-248ENST00000602861 AGLP35573 1532 aa11.45□□□□□ -0.58
HCG18-248ENST00000602861 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
HCG18-248ENST00000602861 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
HCG18-248ENST00000602861 SYCP2Q9BX26 1530 aa11.42□□□□□ -0.58
HCG18-248ENST00000602861 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
HCG18-248ENST00000602861 CDC42BPAQ5VT25 1732 aa11.41□□□□□ -0.58
HCG18-248ENST00000602861 C3P01024 1663 aa11.41□□□□□ -0.58
HCG18-248ENST00000602861 MYT1Q01538 1121 aa11.41□□□□□ -0.58
HCG18-248ENST00000602861 CNTLNQ9NXG0 1405 aa11.41□□□□□ -0.58
HCG18-248ENST00000602861 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
HCG18-248ENST00000602861 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
HCG18-248ENST00000602861 KIDINS220Q9ULH0 1771 aa11.4□□□□□ -0.58
HCG18-248ENST00000602861 GPATCH8Q9UKJ3 1502 aaKnown RBP11.39□□□□□ -0.59
HCG18-248ENST00000602861 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
HCG18-248ENST00000602861 E2F4Q16254 413 aa11.38□□□□□ -0.59
HCG18-248ENST00000602861 ATP7AQ04656 1500 aa11.38□□□□□ -0.59
HCG18-248ENST00000602861 STRCQ7RTU9 1775 aa11.38□□□□□ -0.59
HCG18-248ENST00000602861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.37□□□□□ -0.59
HCG18-248ENST00000602861 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
HCG18-248ENST00000602861 PTPRTO14522 1441 aa11.36□□□□□ -0.59
HCG18-248ENST00000602861 HNRNPMP52272 730 aaKnown RBP eCLIP11.36□□□□□ -0.59
HCG18-248ENST00000602861 LMOD2Q6P5Q4 547 aa11.36□□□□□ -0.59
HCG18-248ENST00000602861 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
HCG18-248ENST00000602861 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
HCG18-248ENST00000602861 CFDP1Q9UEE9 299 aaPredicted RBP11.36□□□□□ -0.59
HCG18-248ENST00000602861 MTUS2Q5JR59 1369 aa11.36□□□□□ -0.59
HCG18-248ENST00000602861 INO80Q9ULG1 1556 aaPredicted RBP11.36□□□□□ -0.59
HCG18-248ENST00000602861 NPATQ14207 1427 aa11.35□□□□□ -0.59
HCG18-248ENST00000602861 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
HCG18-248ENST00000602861 KIAA1107Q9UPP5 1409 aa11.35□□□□□ -0.59
HCG18-248ENST00000602861 TULP1O00294 542 aaPredicted RBP11.35□□□□□ -0.59
HCG18-248ENST00000602861 ITGAEP38570 1179 aa11.35□□□□□ -0.59
HCG18-248ENST00000602861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
HCG18-248ENST00000602861 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
HCG18-248ENST00000602861 MROH2AA6NES4 1674 aa11.34□□□□□ -0.59
HCG18-248ENST00000602861 PLXNC1O60486 1568 aa11.34□□□□□ -0.59
HCG18-248ENST00000602861 A2MP01023 1474 aa11.34□□□□□ -0.59
HCG18-248ENST00000602861 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
HCG18-248ENST00000602861 SUPT6HQ7KZ85 1726 aaKnown RBP11.33□□□□□ -0.6
HCG18-248ENST00000602861 PDE4AP27815 886 aa11.33□□□□□ -0.6
HCG18-248ENST00000602861 ZMYM3Q14202 1370 aa11.32□□□□□ -0.6
HCG18-248ENST00000602861 CAMSAP1Q5T5Y3 1602 aa11.32□□□□□ -0.6
HCG18-248ENST00000602861 EHBP1L1Q8N3D4 1523 aa11.32□□□□□ -0.6
HCG18-248ENST00000602861 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
HCG18-248ENST00000602861 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
HCG18-248ENST00000602861 SETD1BQ9UPS6 1966 aaKnown RBP11.32□□□□□ -0.6
HCG18-248ENST00000602861 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
HCG18-248ENST00000602861 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
HCG18-248ENST00000602861 NCKAP5LQ9HCH0 1330 aa11.31□□□□□ -0.6
HCG18-248ENST00000602861 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
HCG18-248ENST00000602861 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
HCG18-248ENST00000602861 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
HCG18-248ENST00000602861 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
HCG18-248ENST00000602861 DISP3Q9P2K9 1392 aa11.29□□□□□ -0.6
HCG18-248ENST00000602861 GGT6Q6P531 493 aa11.29□□□□□ -0.6
HCG18-248ENST00000602861 SIN3AQ96ST3 1273 aa11.29□□□□□ -0.6
HCG18-248ENST00000602861 ZNF644Q9H582 1327 aaPredicted RBP11.29□□□□□ -0.6
HCG18-248ENST00000602861 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
HCG18-248ENST00000602861 PTPN23Q9H3S7 1636 aa11.28□□□□□ -0.6
HCG18-248ENST00000602861 PTPRKQ15262 1439 aa11.28□□□□□ -0.6
HCG18-248ENST00000602861 ZNF142P52746 1687 aaPredicted RBP11.28□□□□□ -0.6
HCG18-248ENST00000602861 ADGBQ8N7X0 1667 aa11.28□□□□□ -0.6
HCG18-248ENST00000602861 IQSEC2Q5JU85 1478 aa11.28□□□□□ -0.6
HCG18-248ENST00000602861 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
HCG18-248ENST00000602861 FAM50AQ14320 339 aaKnown RBP11.28□□□□□ -0.6
HCG18-248ENST00000602861 FGD6Q6ZV73 1430 aa11.27□□□□□ -0.6
HCG18-248ENST00000602861 PLA2R1Q13018 1463 aa11.27□□□□□ -0.6
HCG18-248ENST00000602861 MBD5Q9P267 1494 aa11.27□□□□□ -0.6
HCG18-248ENST00000602861 PPP1R15AO75807 674 aaPredicted RBP11.27□□□□□ -0.61
HCG18-248ENST00000602861 HAX1O00165 279 aa11.26□□□□□ -0.61
HCG18-248ENST00000602861 SPATA31D1Q6ZQQ2 1576 aa11.25□□□□□ -0.61
HCG18-248ENST00000602861 MFSD10Q14728 455 aa11.25□□□□□ -0.61
HCG18-248ENST00000602861 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
HCG18-248ENST00000602861 CRISPLD2Q9H0B8 497 aa11.25□□□□□ -0.61
HCG18-248ENST00000602861 ZNF335Q9H4Z2 1342 aaPredicted RBP11.25□□□□□ -0.61
HCG18-248ENST00000602861 RTEL1-TNFRSF6BF6WH68 1400 aa11.25□□□□□ -0.61
HCG18-248ENST00000602861 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
HCG18-248ENST00000602861 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
HCG18-248ENST00000602861 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
HCG18-248ENST00000602861 SEMA3EO15041 775 aa11.24□□□□□ -0.61
HCG18-248ENST00000602861 TIE1P35590 1138 aa11.24□□□□□ -0.61
HCG18-248ENST00000602861 NCOA2Q15596 1464 aa11.24□□□□□ -0.61
HCG18-248ENST00000602861 GCC2Q8IWJ2 1684 aa11.24□□□□□ -0.61
HCG18-248ENST00000602861 DHX29Q7Z478 1369 aaKnown RBP11.23□□□□□ -0.61
HCG18-248ENST00000602861 HFM1A2PYH4 1435 aa11.23□□□□□ -0.61
HCG18-248ENST00000602861 A2ML1A8K2U0 1454 aa11.23□□□□□ -0.61
HCG18-248ENST00000602861 TESPA1A2RU30 521 aaPredicted RBP11.22□□□□□ -0.61
HCG18-248ENST00000602861 KDM5DQ9BY66 1539 aa11.22□□□□□ -0.61
HCG18-248ENST00000602861 FAM135AQ9P2D6 1515 aa11.21□□□□□ -0.61
HCG18-248ENST00000602861 TNRQ92752 1358 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms