RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 ASXL1Q8IXJ9 1541 aa12.89□□□□□ -0.35
HCG18-242ENST00000602319 NINLQ9Y2I6 1382 aa12.89□□□□□ -0.35
HCG18-242ENST00000602319 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
HCG18-242ENST00000602319 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
HCG18-242ENST00000602319 ATP10BO94823 1461 aa12.87□□□□□ -0.35
HCG18-242ENST00000602319 ARID3CA6NKF2 412 aa12.87□□□□□ -0.35
HCG18-242ENST00000602319 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
HCG18-242ENST00000602319 SCAPERQ9BY12 1400 aa12.86□□□□□ -0.35
HCG18-242ENST00000602319 SLFN5Q08AF3 891 aa12.86□□□□□ -0.35
HCG18-242ENST00000602319 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
HCG18-242ENST00000602319 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.85□□□□□ -0.35
HCG18-242ENST00000602319 ANTXR1Q9H6X2 564 aa12.85□□□□□ -0.35
HCG18-242ENST00000602319 PANK3Q9H999 370 aa12.85□□□□□ -0.35
HCG18-242ENST00000602319 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
HCG18-242ENST00000602319 TTC37Q6PGP7 1564 aa12.85□□□□□ -0.35
HCG18-242ENST00000602319 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
HCG18-242ENST00000602319 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.35
HCG18-242ENST00000602319 MYO3AQ8NEV4 1616 aa12.83□□□□□ -0.36
HCG18-242ENST00000602319 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
HCG18-242ENST00000602319 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.36
HCG18-242ENST00000602319 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
HCG18-242ENST00000602319 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
HCG18-242ENST00000602319 CC2D1BQ5T0F9 858 aaKnown RBP12.82□□□□□ -0.36
HCG18-242ENST00000602319 TMF1P82094 1093 aa12.81□□□□□ -0.36
HCG18-242ENST00000602319 CARMIL2Q6F5E8 1435 aa12.81□□□□□ -0.36
HCG18-242ENST00000602319 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
HCG18-242ENST00000602319 RRAGDQ9NQL2 400 aaPredicted RBP12.81□□□□□ -0.36
HCG18-242ENST00000602319 TRPM2O94759 1503 aa12.8□□□□□ -0.36
HCG18-242ENST00000602319 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
HCG18-242ENST00000602319 L1TD1Q5T7N2 865 aaKnown RBP12.8□□□□□ -0.36
HCG18-242ENST00000602319 SYCP2Q9BX26 1530 aa12.8□□□□□ -0.36
HCG18-242ENST00000602319 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
HCG18-242ENST00000602319 IQSEC2Q5JU85 1478 aa12.79□□□□□ -0.36
HCG18-242ENST00000602319 DEPDC5O75140 1603 aa12.79□□□□□ -0.36
HCG18-242ENST00000602319 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
HCG18-242ENST00000602319 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
HCG18-242ENST00000602319 POGKQ9P215 609 aa12.79□□□□□ -0.36
HCG18-242ENST00000602319 USP32Q8NFA0 1604 aa12.78□□□□□ -0.36
HCG18-242ENST00000602319 PDE3AQ14432 1141 aa12.78□□□□□ -0.36
HCG18-242ENST00000602319 SCAF11Q99590 1463 aaKnown RBP12.78□□□□□ -0.36
HCG18-242ENST00000602319 ZC3H13Q5T200 1668 aaKnown RBP12.78□□□□□ -0.36
HCG18-242ENST00000602319 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.36
HCG18-242ENST00000602319 ZNF777Q9ULD5 760 aaPredicted RBP12.77□□□□□ -0.36
HCG18-242ENST00000602319 CGNL1Q0VF96 1302 aa12.77□□□□□ -0.37
HCG18-242ENST00000602319 IGHDP01880 384 aa12.77□□□□□ -0.37
HCG18-242ENST00000602319 AAMPQ13685 434 aa12.77□□□□□ -0.37
HCG18-242ENST00000602319 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
HCG18-242ENST00000602319 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
HCG18-242ENST00000602319 BECN1Q14457 450 aa12.75□□□□□ -0.37
HCG18-242ENST00000602319 CLTCL1P53675 1640 aa12.75□□□□□ -0.37
HCG18-242ENST00000602319 SEC24BO95487 1268 aa12.75□□□□□ -0.37
HCG18-242ENST00000602319 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
HCG18-242ENST00000602319 E9PSI1 815 aa12.74□□□□□ -0.37
HCG18-242ENST00000602319 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
HCG18-242ENST00000602319 NCOA3Q9Y6Q9 1424 aa12.74□□□□□ -0.37
HCG18-242ENST00000602319 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
HCG18-242ENST00000602319 CLCN1P35523 988 aa12.73□□□□□ -0.37
HCG18-242ENST00000602319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.73□□□□□ -0.37
HCG18-242ENST00000602319 INO80Q9ULG1 1556 aaPredicted RBP12.73□□□□□ -0.37
HCG18-242ENST00000602319 RGS3P49796 1198 aa12.73□□□□□ -0.37
HCG18-242ENST00000602319 PTPRTO14522 1441 aa12.73□□□□□ -0.37
HCG18-242ENST00000602319 TET3O43151 1660 aa12.72□□□□□ -0.37
HCG18-242ENST00000602319 KANK1Q14678 1352 aa12.72□□□□□ -0.37
HCG18-242ENST00000602319 ADGRB2O60241 1585 aa12.72□□□□□ -0.37
HCG18-242ENST00000602319 CLUAP1Q96AJ1 413 aa12.72□□□□□ -0.37
HCG18-242ENST00000602319 VWDEQ8N2E2 1590 aa12.71□□□□□ -0.37
HCG18-242ENST00000602319 PLEKHD1A6NEE1 506 aa12.71□□□□□ -0.37
HCG18-242ENST00000602319 ABCA6Q8N139 1617 aa12.71□□□□□ -0.37
HCG18-242ENST00000602319 MAP3K4Q9Y6R4 1608 aa12.71□□□□□ -0.38
HCG18-242ENST00000602319 POLR3AO14802 1390 aaPredicted RBP12.7□□□□□ -0.38
HCG18-242ENST00000602319 EIF5BO60841 1220 aaKnown RBP12.7□□□□□ -0.38
HCG18-242ENST00000602319 BCAR3O75815 825 aa12.7□□□□□ -0.38
HCG18-242ENST00000602319 HNRNPMP52272 730 aaKnown RBP eCLIP12.7□□□□□ -0.38
HCG18-242ENST00000602319 ERVK-7P63135 1459 aa12.7□□□□□ -0.38
HCG18-242ENST00000602319 XRCC6P12956 609 aaKnown RBP eCLIP12.7□□□□□ -0.38
HCG18-242ENST00000602319 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
HCG18-242ENST00000602319 KNSTRNQ9Y448 316 aa12.7□□□□□ -0.38
HCG18-242ENST00000602319 MYOM2P54296 1465 aa12.7□□□□□ -0.38
HCG18-242ENST00000602319 ERCC6Q03468 1493 aa12.69□□□□□ -0.38
HCG18-242ENST00000602319 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
HCG18-242ENST00000602319 CDCA8Q53HL2 280 aa12.68□□□□□ -0.38
HCG18-242ENST00000602319 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
HCG18-242ENST00000602319 ISY1Q9ULR0 285 aaKnown RBP12.68□□□□□ -0.38
HCG18-242ENST00000602319 ABCC1P33527 1531 aa12.67□□□□□ -0.38
HCG18-242ENST00000602319 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
HCG18-242ENST00000602319 DDIT3P35638 169 aa12.67□□□□□ -0.38
HCG18-242ENST00000602319 PMFBP1Q8TBY8 1022 aa12.67□□□□□ -0.38
HCG18-242ENST00000602319 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
HCG18-242ENST00000602319 NRXN1Q9ULB1 1477 aa12.67□□□□□ -0.38
HCG18-242ENST00000602319 MCM4P33991 863 aa12.66□□□□□ -0.38
HCG18-242ENST00000602319 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
HCG18-242ENST00000602319 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
HCG18-242ENST00000602319 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
HCG18-242ENST00000602319 ADGRL1O94910 1474 aa12.66□□□□□ -0.38
HCG18-242ENST00000602319 GOLGA6L3A6NEY3 463 aa12.65□□□□□ -0.38
HCG18-242ENST00000602319 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
HCG18-242ENST00000602319 ARHGAP31Q2M1Z3 1444 aa12.65□□□□□ -0.38
HCG18-242ENST00000602319 SBNO2Q9Y2G9 1366 aa12.64□□□□□ -0.39
HCG18-242ENST00000602319 APAF1O14727 1248 aa12.64□□□□□ -0.39
HCG18-242ENST00000602319 RGL3Q3MIN7 710 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms